Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS06255 and EX31_RS06260 are separated by 34 nucleotides EX31_RS06260 and EX31_RS06265 are separated by 605 nucleotides
EX31_RS06255: EX31_RS06255 - YeaH/YhbH family protein, at 12,048 to 13,322
_RS06255
EX31_RS06260: EX31_RS06260 - protein kinase YeaG, at 13,357 to 15,291
_RS06260
EX31_RS06265: EX31_RS06265 - MipA/OmpV family protein, at 15,897 to 16,646
_RS06265
Position (kb) 13
14
15
16 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 12.440 kb on + strand, within EX31_RS06255 at 12.441 kb on - strand, within EX31_RS06255 at 12.452 kb on + strand, within EX31_RS06255 at 12.454 kb on + strand, within EX31_RS06255 at 12.474 kb on - strand, within EX31_RS06255 at 12.474 kb on - strand, within EX31_RS06255 at 12.475 kb on + strand, within EX31_RS06255 at 12.475 kb on + strand, within EX31_RS06255 at 12.476 kb on - strand, within EX31_RS06255 at 12.496 kb on + strand, within EX31_RS06255 at 12.496 kb on + strand, within EX31_RS06255 at 12.496 kb on + strand, within EX31_RS06255 at 12.496 kb on + strand, within EX31_RS06255 at 12.508 kb on + strand, within EX31_RS06255 at 12.509 kb on - strand, within EX31_RS06255 at 12.509 kb on - strand, within EX31_RS06255 at 12.610 kb on + strand, within EX31_RS06255 at 12.610 kb on + strand, within EX31_RS06255 at 12.610 kb on + strand, within EX31_RS06255 at 12.610 kb on + strand, within EX31_RS06255 at 12.636 kb on - strand, within EX31_RS06255 at 12.687 kb on - strand, within EX31_RS06255 at 12.899 kb on + strand, within EX31_RS06255 at 13.244 kb on + strand at 13.244 kb on + strand at 13.245 kb on - strand at 13.245 kb on - strand at 13.310 kb on + strand at 13.311 kb on - strand at 13.315 kb on + strand at 13.322 kb on + strand at 13.322 kb on + strand at 13.322 kb on + strand at 13.322 kb on + strand at 13.322 kb on + strand at 13.322 kb on + strand at 13.323 kb on - strand at 13.498 kb on - strand at 13.766 kb on + strand, within EX31_RS06260 at 13.767 kb on - strand, within EX31_RS06260 at 13.767 kb on - strand, within EX31_RS06260 at 13.770 kb on + strand, within EX31_RS06260 at 13.770 kb on + strand, within EX31_RS06260 at 13.771 kb on - strand, within EX31_RS06260 at 13.771 kb on - strand, within EX31_RS06260 at 13.809 kb on - strand, within EX31_RS06260 at 13.820 kb on + strand, within EX31_RS06260 at 13.821 kb on - strand, within EX31_RS06260 at 13.856 kb on + strand, within EX31_RS06260 at 13.857 kb on - strand, within EX31_RS06260 at 13.950 kb on - strand, within EX31_RS06260 at 13.981 kb on + strand, within EX31_RS06260 at 13.981 kb on + strand, within EX31_RS06260 at 13.982 kb on - strand, within EX31_RS06260 at 14.056 kb on + strand, within EX31_RS06260 at 14.076 kb on - strand, within EX31_RS06260 at 14.129 kb on + strand, within EX31_RS06260 at 14.130 kb on - strand, within EX31_RS06260 at 14.267 kb on + strand, within EX31_RS06260 at 14.318 kb on + strand, within EX31_RS06260 at 14.318 kb on + strand, within EX31_RS06260 at 14.319 kb on - strand, within EX31_RS06260 at 14.343 kb on + strand, within EX31_RS06260 at 14.441 kb on + strand, within EX31_RS06260 at 14.441 kb on + strand, within EX31_RS06260 at 14.441 kb on + strand, within EX31_RS06260 at 14.441 kb on + strand, within EX31_RS06260 at 14.441 kb on + strand, within EX31_RS06260 at 14.441 kb on + strand, within EX31_RS06260 at 14.441 kb on + strand, within EX31_RS06260 at 14.442 kb on - strand, within EX31_RS06260 at 14.442 kb on - strand, within EX31_RS06260 at 14.442 kb on - strand, within EX31_RS06260 at 14.442 kb on - strand, within EX31_RS06260 at 14.442 kb on - strand, within EX31_RS06260 at 14.442 kb on - strand, within EX31_RS06260 at 14.442 kb on - strand, within EX31_RS06260 at 14.442 kb on - strand, within EX31_RS06260 at 14.442 kb on - strand, within EX31_RS06260 at 14.496 kb on + strand, within EX31_RS06260 at 14.540 kb on - strand, within EX31_RS06260 at 14.710 kb on - strand, within EX31_RS06260 at 14.798 kb on + strand, within EX31_RS06260 at 14.798 kb on + strand, within EX31_RS06260 at 14.969 kb on - strand, within EX31_RS06260 at 14.973 kb on - strand, within EX31_RS06260 at 15.136 kb on + strand at 15.136 kb on + strand at 15.137 kb on - strand at 15.189 kb on - strand at 15.189 kb on - strand at 15.217 kb on - strand at 15.260 kb on + strand at 15.260 kb on + strand at 15.283 kb on + strand at 15.283 kb on + strand at 15.283 kb on + strand at 15.284 kb on - strand at 15.284 kb on - strand at 15.284 kb on - strand at 15.284 kb on - strand at 15.284 kb on - strand at 15.291 kb on + strand at 15.292 kb on - strand at 15.292 kb on - strand at 15.311 kb on - strand at 15.315 kb on + strand at 15.372 kb on + strand at 15.373 kb on - strand at 15.373 kb on - strand at 15.373 kb on - strand at 15.380 kb on + strand at 15.380 kb on + strand at 15.381 kb on - strand at 15.381 kb on - strand at 15.381 kb on - strand at 15.381 kb on - strand at 15.381 kb on - strand at 15.509 kb on + strand at 15.610 kb on + strand at 15.611 kb on - strand at 15.614 kb on + strand at 15.616 kb on + strand at 15.616 kb on + strand at 15.617 kb on - strand at 15.617 kb on - strand at 15.617 kb on - strand at 15.623 kb on - strand at 15.666 kb on + strand at 15.674 kb on - strand at 15.674 kb on - strand at 15.759 kb on - strand at 15.765 kb on + strand at 15.777 kb on - strand at 15.807 kb on + strand at 15.807 kb on + strand at 15.808 kb on - strand at 15.808 kb on - strand at 15.818 kb on - strand at 15.819 kb on + strand at 15.820 kb on - strand at 15.820 kb on - strand at 15.858 kb on + strand at 15.864 kb on - strand at 15.881 kb on + strand at 15.881 kb on + strand at 15.881 kb on + strand at 15.891 kb on - strand at 16.025 kb on + strand, within EX31_RS06265 at 16.025 kb on + strand, within EX31_RS06265 at 16.036 kb on + strand, within EX31_RS06265 at 16.037 kb on - strand, within EX31_RS06265 at 16.037 kb on - strand, within EX31_RS06265 at 16.037 kb on - strand, within EX31_RS06265 at 16.037 kb on - strand, within EX31_RS06265 at 16.037 kb on - strand, within EX31_RS06265 at 16.038 kb on + strand, within EX31_RS06265 at 16.060 kb on - strand, within EX31_RS06265 at 16.078 kb on - strand, within EX31_RS06265 at 16.102 kb on - strand, within EX31_RS06265 at 16.105 kb on - strand, within EX31_RS06265 at 16.105 kb on - strand, within EX31_RS06265 at 16.242 kb on + strand, within EX31_RS06265 at 16.243 kb on - strand, within EX31_RS06265
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 12,440 + EX31_RS06255 0.31 +0.7 12,441 - EX31_RS06255 0.31 +1.1 12,452 + EX31_RS06255 0.32 +1.3 12,454 + EX31_RS06255 0.32 +4.1 12,474 - EX31_RS06255 0.33 +0.7 12,474 - EX31_RS06255 0.33 +0.8 12,475 + EX31_RS06255 0.33 +0.3 12,475 + EX31_RS06255 0.33 +0.8 12,476 - EX31_RS06255 0.34 +1.9 12,496 + EX31_RS06255 0.35 +1.2 12,496 + EX31_RS06255 0.35 +2.3 12,496 + EX31_RS06255 0.35 +2.0 12,496 + EX31_RS06255 0.35 +2.5 12,508 + EX31_RS06255 0.36 +3.3 12,509 - EX31_RS06255 0.36 +2.2 12,509 - EX31_RS06255 0.36 +1.5 12,610 + EX31_RS06255 0.44 +2.7 12,610 + EX31_RS06255 0.44 +0.8 12,610 + EX31_RS06255 0.44 +0.7 12,610 + EX31_RS06255 0.44 +0.7 12,636 - EX31_RS06255 0.46 +3.2 12,687 - EX31_RS06255 0.50 +0.6 12,899 + EX31_RS06255 0.67 +1.1 13,244 + +0.9 13,244 + +2.3 13,245 - +0.4 13,245 - +2.3 13,310 + +2.3 13,311 - +3.0 13,315 + +1.2 13,322 + +1.7 13,322 + +0.8 13,322 + +2.1 13,322 + +1.3 13,322 + +1.1 13,322 + +0.4 13,323 - +0.9 13,498 - +1.4 13,766 + EX31_RS06260 0.21 +4.0 13,767 - EX31_RS06260 0.21 +2.1 13,767 - EX31_RS06260 0.21 +1.9 13,770 + EX31_RS06260 0.21 +4.7 13,770 + EX31_RS06260 0.21 +1.0 13,771 - EX31_RS06260 0.21 +2.4 13,771 - EX31_RS06260 0.21 +1.4 13,809 - EX31_RS06260 0.23 -2.1 13,820 + EX31_RS06260 0.24 +2.3 13,821 - EX31_RS06260 0.24 +1.2 13,856 + EX31_RS06260 0.26 +1.1 13,857 - EX31_RS06260 0.26 +3.0 13,950 - EX31_RS06260 0.31 +1.8 13,981 + EX31_RS06260 0.32 +0.9 13,981 + EX31_RS06260 0.32 +1.1 13,982 - EX31_RS06260 0.32 -1.6 14,056 + EX31_RS06260 0.36 +0.2 14,076 - EX31_RS06260 0.37 +1.1 14,129 + EX31_RS06260 0.40 +0.9 14,130 - EX31_RS06260 0.40 +0.7 14,267 + EX31_RS06260 0.47 +1.7 14,318 + EX31_RS06260 0.50 +1.8 14,318 + EX31_RS06260 0.50 +0.7 14,319 - EX31_RS06260 0.50 +1.1 14,343 + EX31_RS06260 0.51 +2.7 14,441 + EX31_RS06260 0.56 +3.7 14,441 + EX31_RS06260 0.56 +2.0 14,441 + EX31_RS06260 0.56 +1.3 14,441 + EX31_RS06260 0.56 -0.3 14,441 + EX31_RS06260 0.56 +3.3 14,441 + EX31_RS06260 0.56 +0.4 14,441 + EX31_RS06260 0.56 +1.7 14,442 - EX31_RS06260 0.56 +0.5 14,442 - EX31_RS06260 0.56 +1.4 14,442 - EX31_RS06260 0.56 -0.1 14,442 - EX31_RS06260 0.56 +2.1 14,442 - EX31_RS06260 0.56 +2.3 14,442 - EX31_RS06260 0.56 +1.4 14,442 - EX31_RS06260 0.56 +1.7 14,442 - EX31_RS06260 0.56 -2.3 14,442 - EX31_RS06260 0.56 +0.7 14,496 + EX31_RS06260 0.59 +0.9 14,540 - EX31_RS06260 0.61 +1.4 14,710 - EX31_RS06260 0.70 +1.8 14,798 + EX31_RS06260 0.74 +0.3 14,798 + EX31_RS06260 0.74 +1.6 14,969 - EX31_RS06260 0.83 +1.8 14,973 - EX31_RS06260 0.84 +1.3 15,136 + +1.2 15,136 + +2.1 15,137 - +1.2 15,189 - +1.8 15,189 - +1.3 15,217 - +1.1 15,260 + +0.5 15,260 + +0.8 15,283 + +4.1 15,283 + +1.4 15,283 + +0.7 15,284 - +2.5 15,284 - +1.9 15,284 - +1.8 15,284 - +4.1 15,284 - +1.9 15,291 + +1.3 15,292 - +0.7 15,292 - +1.7 15,311 - +1.3 15,315 + +2.3 15,372 + +0.7 15,373 - +1.4 15,373 - -1.9 15,373 - +2.3 15,380 + +2.3 15,380 + +1.3 15,381 - +0.1 15,381 - -1.1 15,381 - +2.7 15,381 - +0.9 15,381 - +1.1 15,509 + +1.4 15,610 + +1.2 15,611 - -2.1 15,614 + +1.3 15,616 + +2.4 15,616 + +1.0 15,617 - -0.9 15,617 - +0.9 15,617 - +0.7 15,623 - -0.3 15,666 + -0.9 15,674 - +0.7 15,674 - +0.1 15,759 - -0.3 15,765 + -0.3 15,777 - -0.3 15,807 + -0.1 15,807 + -1.3 15,808 - +1.4 15,808 - -0.3 15,818 - +0.2 15,819 + -0.3 15,820 - -0.5 15,820 - -0.3 15,858 + +1.7 15,864 - -0.3 15,881 + +0.1 15,881 + +2.4 15,881 + -2.1 15,891 - -1.9 16,025 + EX31_RS06265 0.17 +0.2 16,025 + EX31_RS06265 0.17 +0.3 16,036 + EX31_RS06265 0.19 +1.0 16,037 - EX31_RS06265 0.19 +1.5 16,037 - EX31_RS06265 0.19 +2.3 16,037 - EX31_RS06265 0.19 +1.1 16,037 - EX31_RS06265 0.19 +2.0 16,037 - EX31_RS06265 0.19 +3.3 16,038 + EX31_RS06265 0.19 +0.3 16,060 - EX31_RS06265 0.22 +0.7 16,078 - EX31_RS06265 0.24 -1.9 16,102 - EX31_RS06265 0.27 -0.9 16,105 - EX31_RS06265 0.28 -1.3 16,105 - EX31_RS06265 0.28 -1.1 16,242 + EX31_RS06265 0.46 -3.0 16,243 - EX31_RS06265 0.46 -1.9
Or see this region's nucleotide sequence