Strain Fitness in Rahnella sp. WP5 around EX31_RS02645

Experiment: D,L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate (C)
1,614	+		EX31_RS02640	0.11	+1.4
1,637	+		EX31_RS02640	0.14	+0.6
1,693	-		EX31_RS02640	0.22	+0.5
1,693	-		EX31_RS02640	0.22	-0.3
1,699	+		EX31_RS02640	0.23	-0.4
1,699	+		EX31_RS02640	0.23	-1.6
1,699	+		EX31_RS02640	0.23	+1.0
1,699	+		EX31_RS02640	0.23	+0.7
1,700	-		EX31_RS02640	0.23	-1.4
1,700	-		EX31_RS02640	0.23	-0.1
1,700	-		EX31_RS02640	0.23	-1.6
1,701	+		EX31_RS02640	0.23	-1.7
1,701	+		EX31_RS02640	0.23	+1.7
1,701	+		EX31_RS02640	0.23	+0.4
1,701	+		EX31_RS02640	0.23	-0.1
1,701	+		EX31_RS02640	0.23	-0.4
1,702	-		EX31_RS02640	0.23	+0.2
1,702	-		EX31_RS02640	0.23	+0.2
1,702	-		EX31_RS02640	0.23	+0.0
1,702	-		EX31_RS02640	0.23	+0.2
1,702	-		EX31_RS02640	0.23	-0.5
1,702	-		EX31_RS02640	0.23	-1.2
1,879	+		EX31_RS02640	0.47	+0.8
1,979	+		EX31_RS02640	0.60	+1.2
1,979	+		EX31_RS02640	0.60	+0.9
1,979	+		EX31_RS02640	0.60	+0.7
1,980	-		EX31_RS02640	0.60	-0.6
1,980	-		EX31_RS02640	0.60	+1.6
2,046	+		EX31_RS02640	0.69	+1.2
2,046	+		EX31_RS02640	0.69	+0.5
2,075	+		EX31_RS02640	0.73	-1.6
2,083	-		EX31_RS02640	0.74	-0.1
2,083	-		EX31_RS02640	0.74	-0.6
2,103	+		EX31_RS02640	0.77	+0.4
2,149	+		EX31_RS02640	0.83	+0.4
2,150	-		EX31_RS02640	0.83	-0.5
2,164	+		EX31_RS02640	0.85	-0.4
2,164	+		EX31_RS02640	0.85	+1.6
2,165	-		EX31_RS02640	0.85	-1.3
2,165	-		EX31_RS02640	0.85	-0.4
2,165	-		EX31_RS02640	0.85	-0.7
2,222	-				-1.6
2,369	-				-0.9
2,378	+				+1.0
2,378	+				-0.6
2,379	-				-0.1
2,379	-				-2.5
2,385	+				+0.5
2,386	-				-0.8
2,388	+				-2.2
2,388	+				+0.4
2,388	+				-1.0
2,389	-				+2.4
2,389	-				-1.4
2,389	-				+1.6
2,503	+				-1.6
2,503	+				-1.4
2,504	-				+1.2
2,524	-				+1.4
2,528	+				+0.0
2,528	+				+0.7
2,529	-				+1.3
2,529	-				+0.8
2,529	-				-1.5
2,529	-				+0.7
2,536	+				+1.2
2,536	+				+1.7
2,536	+				-0.8
2,537	-				-0.5
2,543	+				-1.0
2,544	-				-0.1
2,544	-				+0.7
2,544	-				+0.2
2,546	+				+1.2
2,546	+				+0.7
2,547	-				+0.7
2,547	-				+0.5
2,547	-				+1.4
2,568	+				-2.5
2,568	+				-0.4
2,568	+				+0.2
2,569	-				-0.1
2,680	+				+0.4
2,680	+				+0.4
2,680	+				-2.3
2,681	-				-2.9
2,681	-				+0.4
2,681	-				-0.3
2,685	-				-0.4
2,735	+		EX31_RS02645	0.11	-0.1
2,736	-		EX31_RS02645	0.11	+2.5
2,736	-		EX31_RS02645	0.11	-1.6
2,738	+		EX31_RS02645	0.11	+0.6
2,832	-		EX31_RS02645	0.18	+0.7
2,832	-		EX31_RS02645	0.18	-1.8
2,908	+		EX31_RS02645	0.23	-0.2
2,908	+		EX31_RS02645	0.23	+0.3
2,908	+		EX31_RS02645	0.23	+0.2
2,909	-		EX31_RS02645	0.23	-2.5
2,958	+		EX31_RS02645	0.27	+0.5
2,958	+		EX31_RS02645	0.27	+1.4
2,959	-		EX31_RS02645	0.27	+0.2
2,959	-		EX31_RS02645	0.27	-0.2
2,973	+		EX31_RS02645	0.28	+0.2
2,973	+		EX31_RS02645	0.28	-0.5
3,024	+		EX31_RS02645	0.32	-0.2
3,024	+		EX31_RS02645	0.32	+1.6
3,024	+		EX31_RS02645	0.32	+0.8
3,024	+		EX31_RS02645	0.32	-0.4
3,025	-		EX31_RS02645	0.32	+1.4
3,025	-		EX31_RS02645	0.32	-0.5
3,025	-		EX31_RS02645	0.32	-1.1
3,060	+		EX31_RS02645	0.34	-1.6
3,061	-		EX31_RS02645	0.34	+2.1
3,061	-		EX31_RS02645	0.34	+1.3
3,061	-		EX31_RS02645	0.34	-0.6
3,084	+		EX31_RS02645	0.36	-0.6
3,084	+		EX31_RS02645	0.36	+0.7
3,085	-		EX31_RS02645	0.36	-0.4
3,217	+		EX31_RS02645	0.45	-0.9
3,217	+		EX31_RS02645	0.45	-0.6
3,320	+		EX31_RS02645	0.53	-0.4
3,402	+		EX31_RS02645	0.59	+0.5
3,402	+		EX31_RS02645	0.59	-0.5
3,402	+		EX31_RS02645	0.59	-2.5
3,402	+		EX31_RS02645	0.59	-1.1
3,402	+		EX31_RS02645	0.59	+0.8
3,402	+		EX31_RS02645	0.59	-0.1
3,402	+		EX31_RS02645	0.59	-2.3
3,402	+		EX31_RS02645	0.59	+2.0
3,402	+		EX31_RS02645	0.59	+0.7
3,402	+		EX31_RS02645	0.59	-0.6
3,402	+		EX31_RS02645	0.59	+1.7
3,402	+		EX31_RS02645	0.59	-1.6
3,402	+		EX31_RS02645	0.59	-0.3
3,402	+		EX31_RS02645	0.59	+0.3
3,402	+		EX31_RS02645	0.59	+0.9
3,402	+		EX31_RS02645	0.59	+0.5
3,403	-		EX31_RS02645	0.59	+1.6
3,403	-		EX31_RS02645	0.59	+2.3
3,403	-		EX31_RS02645	0.59	+1.6
3,403	-		EX31_RS02645	0.59	+3.2
3,403	-		EX31_RS02645	0.59	-0.2
3,403	-		EX31_RS02645	0.59	-0.4
3,403	-		EX31_RS02645	0.59	-0.4
3,403	-		EX31_RS02645	0.59	-1.6
3,403	-		EX31_RS02645	0.59	-0.6
3,405	+		EX31_RS02645	0.59	+0.9
3,405	+		EX31_RS02645	0.59	+1.0
3,405	+		EX31_RS02645	0.59	-1.2
3,406	-		EX31_RS02645	0.59	+0.5
3,406	-		EX31_RS02645	0.59	+0.1
3,406	-		EX31_RS02645	0.59	-0.2
3,406	-		EX31_RS02645	0.59	-1.8
3,406	-		EX31_RS02645	0.59	+1.2
3,537	-		EX31_RS02645	0.68	-2.1
3,537	-		EX31_RS02645	0.68	+2.3
3,542	+		EX31_RS02645	0.69	-0.3
3,596	+		EX31_RS02645	0.73	-0.1
3,596	+		EX31_RS02645	0.73	+0.5
3,596	+		EX31_RS02645	0.73	+0.8
3,596	+		EX31_RS02645	0.73	-2.5
3,596	+		EX31_RS02645	0.73	-1.0
3,596	+		EX31_RS02645	0.73	+0.2
3,596	+		EX31_RS02645	0.73	-1.6
3,596	+		EX31_RS02645	0.73	+0.4
3,596	+		EX31_RS02645	0.73	-2.4
3,596	+		EX31_RS02645	0.73	+0.0
3,596	+		EX31_RS02645	0.73	+0.4
3,596	+		EX31_RS02645	0.73	+1.0
3,596	+		EX31_RS02645	0.73	-1.5
3,596	+		EX31_RS02645	0.73	-1.4
3,597	-		EX31_RS02645	0.73	+0.8
3,597	-		EX31_RS02645	0.73	+1.4
3,597	-		EX31_RS02645	0.73	+1.6
3,597	-		EX31_RS02645	0.73	+1.7
3,597	-		EX31_RS02645	0.73	-0.3
3,597	-		EX31_RS02645	0.73	-1.5
3,597	-		EX31_RS02645	0.73	-1.8
3,597	-		EX31_RS02645	0.73	-0.4
3,633	+		EX31_RS02645	0.75	-0.7
3,633	+		EX31_RS02645	0.75	+1.9
3,634	-		EX31_RS02645	0.75	+0.7
3,759	-		EX31_RS02645	0.84	-0.7
3,836	+		EX31_RS02645	0.90	-2.0
3,836	+		EX31_RS02645	0.90	+1.7
3,837	-		EX31_RS02645	0.90	+2.3
3,837	-		EX31_RS02645	0.90	+0.0
3,849	+				-0.2
3,849	+				+2.2
3,849	+				-0.9
3,850	-				+1.2
3,884	+				-0.3
3,885	-				+0.4
3,975	+				+2.2
3,975	+				-1.5
3,975	+				+0.8
3,975	+				+1.2
3,975	+				-0.7
3,975	+				-0.6
3,975	+				+0.5
3,975	+				-0.3
3,975	+				-1.4
3,975	+				+2.0
3,976	-				+1.6
3,976	-				+0.4
3,976	-				+0.2
3,976	-				-0.8
3,976	-				+1.0
3,976	-				+1.6
3,976	-				+2.2
3,976	-				+1.0
3,976	-				-0.0
3,980	+				+1.2
3,980	+				+0.5
3,981	-				-0.8
3,981	-				+0.4
3,986	+				-1.4
3,986	+				+0.7
3,986	+				-0.1
3,986	+				-0.5
3,987	-				+0.9
3,987	-				+1.7
3,987	-				+0.7
3,987	-				+0.1
3,987	-				+1.7
3,990	+				+0.1
3,990	+				+0.5
3,990	+				-0.2
3,990	+				-1.2
3,990	+				+0.8
3,990	+				+0.0
3,990	+				+0.5
3,991	-				-1.2
3,991	-				-0.4
3,991	-				+1.2
3,991	-				+1.2
4,030	+				-2.1
4,031	-				-0.2
4,055	+				-0.3
4,055	+				-0.3
4,056	-				+1.7
4,056	-				+0.3
4,165	-		EX31_RS02650	0.19	-0.3
4,185	+		EX31_RS02650	0.22	+0.2
4,186	-		EX31_RS02650	0.23	-2.4
4,186	-		EX31_RS02650	0.23	-0.8
4,219	-		EX31_RS02650	0.29	-1.1
4,255	+		EX31_RS02650	0.36	+0.8
4,255	+		EX31_RS02650	0.36	-0.7
4,256	-		EX31_RS02650	0.36	+0.4
4,256	-		EX31_RS02650	0.36	-0.7
4,321	+		EX31_RS02650	0.48	+0.6
4,321	+		EX31_RS02650	0.48	+0.4
4,322	-		EX31_RS02650	0.49	+0.5
4,322	-		EX31_RS02650	0.49	-0.2
4,322	-		EX31_RS02650	0.49	+1.0
4,323	+		EX31_RS02650	0.49	-0.3
4,323	+		EX31_RS02650	0.49	-0.6
4,324	-		EX31_RS02650	0.49	+0.9
4,324	-		EX31_RS02650	0.49	-2.0
4,324	-		EX31_RS02650	0.49	-0.2
4,324	-		EX31_RS02650	0.49	-2.3
4,443	-		EX31_RS02650	0.72	+0.1
4,443	-		EX31_RS02650	0.72	+1.6
4,455	+		EX31_RS02650	0.74	-1.4
4,455	+		EX31_RS02650	0.74	-0.1
4,456	-		EX31_RS02650	0.74	+0.8
4,460	-		EX31_RS02650	0.75	-0.4
4,460	-		EX31_RS02650	0.75	+1.7
4,460	-		EX31_RS02650	0.75	+0.2
4,489	+		EX31_RS02650	0.81	+0.4
4,489	+		EX31_RS02650	0.81	+0.4
4,490	-		EX31_RS02650	0.81	+1.2
4,490	-		EX31_RS02650	0.81	-2.0
4,502	+		EX31_RS02650	0.83	-2.3
4,502	+		EX31_RS02650	0.83	+0.2
4,503	-		EX31_RS02650	0.83	+0.2
4,503	-		EX31_RS02650	0.83	-0.6
4,503	-		EX31_RS02650	0.83	+1.2
4,580	+				-2.4
4,581	-				+0.3
4,661	+				-0.8
4,662	-				+0.1
4,662	-				-0.4
4,702	+				-0.2
4,703	-				+0.1
4,703	-				+0.3
4,769	+		EX31_RS02655	0.12	-1.8
4,769	+		EX31_RS02655	0.12	+1.5
4,827	+		EX31_RS02655	0.20	-1.0
4,901	+		EX31_RS02655	0.31	-0.1
4,901	+		EX31_RS02655	0.31	-0.3
4,901	+		EX31_RS02655	0.31	-0.6
4,901	+		EX31_RS02655	0.31	+0.5
4,902	-		EX31_RS02655	0.31	+1.4
4,902	-		EX31_RS02655	0.31	+0.1