Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS18355 and CA265_RS18360 are separated by 117 nucleotides CA265_RS18360 and CA265_RS18365 are separated by 106 nucleotides CA265_RS18365 and CA265_RS18370 are separated by 173 nucleotides
CA265_RS18355: CA265_RS18355 - 3-oxoacyl-ACP synthase, at 4,569,376 to 4,570,374
_RS18355
CA265_RS18360: CA265_RS18360 - acetyl-CoA carboxylase, biotin carboxyl carrier protein, at 4,570,492 to 4,570,968
_RS18360
CA265_RS18365: CA265_RS18365 - acetyl-CoA carboxylase biotin carboxylase subunit, at 4,571,075 to 4,572,415
_RS18365
CA265_RS18370: CA265_RS18370 - hypothetical protein, at 4,572,589 to 4,573,776
_RS18370
Position (kb) 4571
4572
4573 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4570.360 kb on + strand at 4570.962 kb on + strand at 4570.962 kb on + strand at 4571.048 kb on + strand at 4572.606 kb on + strand at 4572.739 kb on - strand, within CA265_RS18370 at 4572.772 kb on + strand at 4572.782 kb on - strand, within CA265_RS18370 at 4572.810 kb on + strand, within CA265_RS18370 at 4572.810 kb on + strand, within CA265_RS18370 at 4572.811 kb on - strand, within CA265_RS18370 at 4572.816 kb on + strand, within CA265_RS18370 at 4572.816 kb on + strand, within CA265_RS18370 at 4572.817 kb on - strand, within CA265_RS18370 at 4572.817 kb on - strand, within CA265_RS18370 at 4572.817 kb on - strand, within CA265_RS18370 at 4572.821 kb on - strand, within CA265_RS18370 at 4572.831 kb on + strand, within CA265_RS18370 at 4572.848 kb on + strand, within CA265_RS18370 at 4572.887 kb on + strand, within CA265_RS18370 at 4572.904 kb on - strand, within CA265_RS18370 at 4572.984 kb on - strand, within CA265_RS18370 at 4572.984 kb on - strand, within CA265_RS18370 at 4572.984 kb on - strand, within CA265_RS18370 at 4573.033 kb on + strand, within CA265_RS18370 at 4573.034 kb on - strand, within CA265_RS18370 at 4573.034 kb on - strand, within CA265_RS18370 at 4573.071 kb on + strand, within CA265_RS18370 at 4573.072 kb on - strand, within CA265_RS18370 at 4573.078 kb on + strand, within CA265_RS18370 at 4573.082 kb on - strand, within CA265_RS18370 at 4573.160 kb on - strand, within CA265_RS18370 at 4573.163 kb on + strand, within CA265_RS18370 at 4573.163 kb on + strand, within CA265_RS18370 at 4573.163 kb on + strand, within CA265_RS18370 at 4573.166 kb on - strand, within CA265_RS18370 at 4573.167 kb on + strand, within CA265_RS18370 at 4573.182 kb on + strand, within CA265_RS18370 at 4573.235 kb on + strand, within CA265_RS18370 at 4573.236 kb on - strand, within CA265_RS18370 at 4573.239 kb on + strand, within CA265_RS18370 at 4573.282 kb on - strand, within CA265_RS18370 at 4573.308 kb on + strand, within CA265_RS18370 at 4573.314 kb on + strand, within CA265_RS18370 at 4573.360 kb on + strand, within CA265_RS18370 at 4573.360 kb on + strand, within CA265_RS18370 at 4573.360 kb on + strand, within CA265_RS18370 at 4573.361 kb on - strand, within CA265_RS18370 at 4573.361 kb on - strand, within CA265_RS18370
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 4,570,360 + -1.0 4,570,962 + -0.2 4,570,962 + -0.0 4,571,048 + +2.0 4,572,606 + -0.3 4,572,739 - CA265_RS18370 0.13 -1.1 4,572,772 + -0.6 4,572,782 - CA265_RS18370 0.16 +0.3 4,572,810 + CA265_RS18370 0.19 +0.5 4,572,810 + CA265_RS18370 0.19 +0.0 4,572,811 - CA265_RS18370 0.19 +0.4 4,572,816 + CA265_RS18370 0.19 +2.0 4,572,816 + CA265_RS18370 0.19 -0.7 4,572,817 - CA265_RS18370 0.19 +1.0 4,572,817 - CA265_RS18370 0.19 +0.5 4,572,817 - CA265_RS18370 0.19 +0.8 4,572,821 - CA265_RS18370 0.20 +1.8 4,572,831 + CA265_RS18370 0.20 +0.7 4,572,848 + CA265_RS18370 0.22 -1.9 4,572,887 + CA265_RS18370 0.25 +0.6 4,572,904 - CA265_RS18370 0.27 -1.6 4,572,984 - CA265_RS18370 0.33 -0.7 4,572,984 - CA265_RS18370 0.33 -1.6 4,572,984 - CA265_RS18370 0.33 +0.7 4,573,033 + CA265_RS18370 0.37 +0.9 4,573,034 - CA265_RS18370 0.37 -0.6 4,573,034 - CA265_RS18370 0.37 +0.3 4,573,071 + CA265_RS18370 0.41 +0.6 4,573,072 - CA265_RS18370 0.41 +0.4 4,573,078 + CA265_RS18370 0.41 -0.2 4,573,082 - CA265_RS18370 0.41 -0.3 4,573,160 - CA265_RS18370 0.48 -2.4 4,573,163 + CA265_RS18370 0.48 -0.1 4,573,163 + CA265_RS18370 0.48 -2.4 4,573,163 + CA265_RS18370 0.48 +0.4 4,573,166 - CA265_RS18370 0.49 +0.3 4,573,167 + CA265_RS18370 0.49 -0.8 4,573,182 + CA265_RS18370 0.50 -1.0 4,573,235 + CA265_RS18370 0.54 -0.3 4,573,236 - CA265_RS18370 0.54 +0.0 4,573,239 + CA265_RS18370 0.55 -0.1 4,573,282 - CA265_RS18370 0.58 +0.0 4,573,308 + CA265_RS18370 0.61 -1.1 4,573,314 + CA265_RS18370 0.61 +0.0 4,573,360 + CA265_RS18370 0.65 -1.8 4,573,360 + CA265_RS18370 0.65 -2.1 4,573,360 + CA265_RS18370 0.65 -0.4 4,573,361 - CA265_RS18370 0.65 -0.4 4,573,361 - CA265_RS18370 0.65 -0.4
Or see this region's nucleotide sequence