Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_28795

Experiment: L-Arginine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_28790 and AO356_28795 are separated by 28 nucleotidesAO356_28795 and AO356_28800 are separated by 46 nucleotides AO356_28790: AO356_28790 - cysteine synthase, at 6,694,821 to 6,695,864 _28790 AO356_28795: AO356_28795 - hypothetical protein, at 6,695,893 to 6,697,041 _28795 AO356_28800: AO356_28800 - hypothetical protein, at 6,697,088 to 6,698,935 _28800 Position (kb) 6695 6696 6697 6698Strain fitness (log2 ratio) -1 0 1 2at 6694.967 kb on - strand, within AO356_28790at 6695.286 kb on + strand, within AO356_28790at 6695.340 kb on + strand, within AO356_28790at 6695.341 kb on - strand, within AO356_28790at 6695.341 kb on - strand, within AO356_28790at 6695.530 kb on - strand, within AO356_28790at 6695.530 kb on - strand, within AO356_28790at 6695.589 kb on + strand, within AO356_28790at 6695.721 kb on + strand, within AO356_28790at 6695.722 kb on - strand, within AO356_28790at 6696.188 kb on - strand, within AO356_28795at 6696.211 kb on + strand, within AO356_28795at 6696.212 kb on - strand, within AO356_28795at 6696.212 kb on - strand, within AO356_28795at 6696.377 kb on - strand, within AO356_28795at 6696.529 kb on + strand, within AO356_28795at 6696.619 kb on + strand, within AO356_28795at 6696.620 kb on - strand, within AO356_28795at 6696.844 kb on + strand, within AO356_28795at 6696.844 kb on + strand, within AO356_28795at 6696.976 kb on + strandat 6696.976 kb on + strandat 6696.977 kb on - strandat 6697.009 kb on + strandat 6697.064 kb on - strandat 6697.082 kb on - strandat 6697.220 kb on + strandat 6697.539 kb on - strand, within AO356_28800at 6697.614 kb on - strand, within AO356_28800at 6697.614 kb on - strand, within AO356_28800at 6697.614 kb on - strand, within AO356_28800at 6697.887 kb on - strand, within AO356_28800at 6697.890 kb on + strand, within AO356_28800at 6697.890 kb on + strand, within AO356_28800at 6697.891 kb on - strand, within AO356_28800

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (C)
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6,694,967 - AO356_28790 0.14 +0.0
6,695,286 + AO356_28790 0.45 +0.6
6,695,340 + AO356_28790 0.50 +0.8
6,695,341 - AO356_28790 0.50 +1.1
6,695,341 - AO356_28790 0.50 -0.2
6,695,530 - AO356_28790 0.68 -0.7
6,695,530 - AO356_28790 0.68 -0.8
6,695,589 + AO356_28790 0.74 +0.4
6,695,721 + AO356_28790 0.86 +0.4
6,695,722 - AO356_28790 0.86 +0.4
6,696,188 - AO356_28795 0.26 +2.5
6,696,211 + AO356_28795 0.28 +0.8
6,696,212 - AO356_28795 0.28 +0.3
6,696,212 - AO356_28795 0.28 +0.6
6,696,377 - AO356_28795 0.42 +0.3
6,696,529 + AO356_28795 0.55 +0.8
6,696,619 + AO356_28795 0.63 -0.2
6,696,620 - AO356_28795 0.63 -0.7
6,696,844 + AO356_28795 0.83 +1.2
6,696,844 + AO356_28795 0.83 +0.7
6,696,976 + +0.9
6,696,976 + -0.1
6,696,977 - +0.1
6,697,009 + +1.8
6,697,064 - +0.3
6,697,082 - +0.8
6,697,220 + -0.2
6,697,539 - AO356_28800 0.24 +0.1
6,697,614 - AO356_28800 0.28 +0.3
6,697,614 - AO356_28800 0.28 +0.3
6,697,614 - AO356_28800 0.28 -0.3
6,697,887 - AO356_28800 0.43 +0.6
6,697,890 + AO356_28800 0.43 +0.1
6,697,890 + AO356_28800 0.43 -0.1
6,697,891 - AO356_28800 0.43 -0.8

Or see this region's nucleotide sequence