Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03770 and AO356_03775 overlap by 1 nucleotides AO356_03775 and AO356_03780 are separated by 0 nucleotides AO356_03780 and AO356_03785 are separated by 71 nucleotides AO356_03785 and AO356_03790 are separated by 9 nucleotides AO356_03790 and AO356_03795 are separated by 231 nucleotides
AO356_03770: AO356_03770 - flagellar biosynthesis protein flip, at 837,281 to 838,030
_03770
AO356_03775: AO356_03775 - flagellar assembly protein FliO, at 838,030 to 838,467
_03775
AO356_03780: AO356_03780 - flagellar motor switch protein, at 838,468 to 838,926
_03780
AO356_03785: AO356_03785 - flagellar motor switch protein FliM, at 838,998 to 839,966
_03785
AO356_03790: AO356_03790 - flagellar basal body protein FliL, at 839,976 to 840,479
_03790
AO356_03795: AO356_03795 - flagellar hook-length control protein, at 840,711 to 842,084
_03795
Position (kb) 838
839
840 Strain fitness (log2 ratio) -1
0
1
2 at 838.031 kb on + strand at 838.032 kb on - strand at 838.032 kb on - strand at 838.038 kb on + strand at 838.111 kb on + strand, within AO356_03775 at 838.864 kb on + strand, within AO356_03780 at 838.908 kb on + strand at 838.914 kb on + strand at 838.915 kb on - strand at 838.915 kb on - strand at 838.981 kb on + strand at 838.981 kb on + strand at 838.981 kb on + strand at 838.981 kb on + strand at 838.981 kb on + strand at 838.981 kb on + strand at 838.982 kb on - strand at 838.982 kb on - strand at 838.982 kb on - strand at 839.099 kb on + strand, within AO356_03785 at 839.099 kb on + strand, within AO356_03785 at 839.099 kb on + strand, within AO356_03785 at 839.099 kb on + strand, within AO356_03785 at 839.099 kb on + strand, within AO356_03785 at 839.099 kb on + strand, within AO356_03785 at 839.099 kb on + strand, within AO356_03785 at 839.100 kb on - strand, within AO356_03785 at 839.100 kb on - strand, within AO356_03785 at 839.100 kb on - strand, within AO356_03785 at 839.312 kb on - strand, within AO356_03785 at 839.434 kb on + strand, within AO356_03785 at 839.434 kb on + strand, within AO356_03785 at 839.434 kb on + strand, within AO356_03785 at 839.434 kb on + strand, within AO356_03785 at 839.434 kb on + strand, within AO356_03785 at 839.434 kb on + strand, within AO356_03785 at 839.435 kb on - strand, within AO356_03785 at 839.435 kb on - strand, within AO356_03785 at 839.435 kb on - strand, within AO356_03785 at 839.677 kb on + strand, within AO356_03785 at 839.677 kb on + strand, within AO356_03785 at 839.678 kb on - strand, within AO356_03785 at 839.678 kb on - strand, within AO356_03785 at 839.693 kb on - strand, within AO356_03785 at 839.693 kb on - strand, within AO356_03785 at 839.693 kb on - strand, within AO356_03785 at 839.693 kb on - strand, within AO356_03785 at 839.693 kb on - strand, within AO356_03785 at 839.776 kb on + strand, within AO356_03785 at 839.776 kb on + strand, within AO356_03785 at 839.854 kb on + strand, within AO356_03785 at 839.854 kb on + strand, within AO356_03785 at 839.855 kb on - strand, within AO356_03785 at 839.895 kb on + strand at 839.895 kb on + strand at 839.895 kb on + strand at 839.896 kb on - strand at 839.993 kb on + strand at 839.993 kb on + strand at 839.994 kb on - strand at 839.994 kb on - strand at 840.144 kb on - strand, within AO356_03790 at 840.144 kb on - strand, within AO356_03790 at 840.209 kb on + strand, within AO356_03790 at 840.209 kb on + strand, within AO356_03790 at 840.209 kb on + strand, within AO356_03790 at 840.209 kb on + strand, within AO356_03790 at 840.209 kb on + strand, within AO356_03790 at 840.210 kb on - strand, within AO356_03790 at 840.210 kb on - strand, within AO356_03790 at 840.226 kb on + strand, within AO356_03790 at 840.226 kb on + strand, within AO356_03790 at 840.226 kb on + strand, within AO356_03790 at 840.226 kb on + strand, within AO356_03790 at 840.226 kb on + strand, within AO356_03790 at 840.226 kb on + strand, within AO356_03790 at 840.226 kb on + strand, within AO356_03790 at 840.226 kb on + strand, within AO356_03790 at 840.227 kb on - strand, within AO356_03790 at 840.227 kb on - strand, within AO356_03790 at 840.227 kb on - strand, within AO356_03790 at 840.250 kb on + strand, within AO356_03790 at 840.250 kb on + strand, within AO356_03790 at 840.251 kb on - strand, within AO356_03790 at 840.251 kb on - strand, within AO356_03790 at 840.251 kb on - strand, within AO356_03790 at 840.251 kb on - strand, within AO356_03790 at 840.251 kb on - strand, within AO356_03790 at 840.251 kb on - strand, within AO356_03790 at 840.251 kb on - strand, within AO356_03790 at 840.358 kb on + strand, within AO356_03790 at 840.358 kb on + strand, within AO356_03790 at 840.358 kb on + strand, within AO356_03790 at 840.359 kb on - strand, within AO356_03790 at 840.453 kb on + strand at 840.485 kb on + strand at 840.486 kb on - strand at 840.486 kb on - strand at 840.497 kb on - strand at 840.540 kb on + strand at 840.541 kb on - strand at 840.558 kb on - strand at 840.577 kb on + strand at 840.577 kb on + strand at 840.577 kb on + strand at 840.577 kb on + strand at 840.577 kb on + strand at 840.577 kb on + strand at 840.578 kb on - strand at 840.718 kb on + strand at 840.718 kb on + strand at 840.718 kb on + strand at 840.718 kb on + strand at 840.719 kb on - strand at 840.719 kb on - strand at 840.719 kb on - strand at 840.719 kb on - strand at 840.719 kb on - strand at 840.719 kb on - strand at 840.719 kb on - strand at 840.719 kb on - strand at 840.719 kb on - strand at 840.721 kb on + strand at 840.722 kb on - strand at 840.722 kb on - strand at 840.722 kb on - strand at 840.722 kb on - strand at 840.722 kb on - strand at 840.830 kb on + strand at 840.830 kb on + strand at 840.831 kb on - strand at 840.831 kb on - strand at 840.933 kb on - strand, within AO356_03795 at 840.933 kb on - strand, within AO356_03795
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 838,031 + +0.5 838,032 - +0.7 838,032 - +0.4 838,038 + +1.2 838,111 + AO356_03775 0.18 +1.1 838,864 + AO356_03780 0.86 +1.0 838,908 + +1.3 838,914 + +1.0 838,915 - +1.4 838,915 - +1.0 838,981 + -0.5 838,981 + +0.7 838,981 + +1.4 838,981 + +0.5 838,981 + +0.8 838,981 + +1.1 838,982 - -0.2 838,982 - +0.3 838,982 - -0.4 839,099 + AO356_03785 0.10 +1.0 839,099 + AO356_03785 0.10 +0.4 839,099 + AO356_03785 0.10 +0.4 839,099 + AO356_03785 0.10 +1.2 839,099 + AO356_03785 0.10 +1.0 839,099 + AO356_03785 0.10 +0.9 839,099 + AO356_03785 0.10 +0.3 839,100 - AO356_03785 0.11 +0.5 839,100 - AO356_03785 0.11 +0.6 839,100 - AO356_03785 0.11 +1.0 839,312 - AO356_03785 0.32 +1.4 839,434 + AO356_03785 0.45 -0.1 839,434 + AO356_03785 0.45 +0.6 839,434 + AO356_03785 0.45 +1.2 839,434 + AO356_03785 0.45 +0.9 839,434 + AO356_03785 0.45 +0.8 839,434 + AO356_03785 0.45 +1.0 839,435 - AO356_03785 0.45 +0.8 839,435 - AO356_03785 0.45 +1.9 839,435 - AO356_03785 0.45 +0.9 839,677 + AO356_03785 0.70 +1.8 839,677 + AO356_03785 0.70 +0.8 839,678 - AO356_03785 0.70 +1.3 839,678 - AO356_03785 0.70 +0.4 839,693 - AO356_03785 0.72 +0.2 839,693 - AO356_03785 0.72 +0.7 839,693 - AO356_03785 0.72 +0.8 839,693 - AO356_03785 0.72 -0.2 839,693 - AO356_03785 0.72 +0.5 839,776 + AO356_03785 0.80 +1.6 839,776 + AO356_03785 0.80 +1.2 839,854 + AO356_03785 0.88 +1.7 839,854 + AO356_03785 0.88 +1.0 839,855 - AO356_03785 0.88 +0.7 839,895 + +1.8 839,895 + +1.3 839,895 + +0.5 839,896 - +1.2 839,993 + +1.0 839,993 + +0.4 839,994 - -0.1 839,994 - +0.6 840,144 - AO356_03790 0.33 +0.6 840,144 - AO356_03790 0.33 +0.6 840,209 + AO356_03790 0.46 +1.6 840,209 + AO356_03790 0.46 +0.7 840,209 + AO356_03790 0.46 +1.2 840,209 + AO356_03790 0.46 -1.3 840,209 + AO356_03790 0.46 +0.6 840,210 - AO356_03790 0.46 +0.4 840,210 - AO356_03790 0.46 +0.5 840,226 + AO356_03790 0.50 +1.4 840,226 + AO356_03790 0.50 +1.5 840,226 + AO356_03790 0.50 +0.1 840,226 + AO356_03790 0.50 +0.8 840,226 + AO356_03790 0.50 +0.8 840,226 + AO356_03790 0.50 +0.3 840,226 + AO356_03790 0.50 +0.8 840,226 + AO356_03790 0.50 +0.7 840,227 - AO356_03790 0.50 -0.2 840,227 - AO356_03790 0.50 +0.1 840,227 - AO356_03790 0.50 +0.3 840,250 + AO356_03790 0.54 +1.2 840,250 + AO356_03790 0.54 +1.1 840,251 - AO356_03790 0.55 -0.2 840,251 - AO356_03790 0.55 +0.3 840,251 - AO356_03790 0.55 +1.7 840,251 - AO356_03790 0.55 -0.4 840,251 - AO356_03790 0.55 -0.1 840,251 - AO356_03790 0.55 -0.3 840,251 - AO356_03790 0.55 -0.4 840,358 + AO356_03790 0.76 +1.0 840,358 + AO356_03790 0.76 +0.2 840,358 + AO356_03790 0.76 +0.9 840,359 - AO356_03790 0.76 +1.3 840,453 + +1.1 840,485 + +0.5 840,486 - +1.2 840,486 - +0.7 840,497 - -0.1 840,540 + +1.8 840,541 - -0.6 840,558 - -0.5 840,577 + +1.4 840,577 + +0.1 840,577 + +0.4 840,577 + +0.5 840,577 + +0.0 840,577 + -0.2 840,578 - -0.2 840,718 + +1.5 840,718 + +1.0 840,718 + +0.9 840,718 + +1.1 840,719 - +1.1 840,719 - +0.7 840,719 - +0.5 840,719 - +0.8 840,719 - -0.6 840,719 - +1.4 840,719 - +1.8 840,719 - -0.1 840,719 - +0.9 840,721 + +0.4 840,722 - +0.7 840,722 - +1.0 840,722 - +0.5 840,722 - +0.9 840,722 - +0.8 840,830 + +1.0 840,830 + +1.4 840,831 - +0.2 840,831 - -1.0 840,933 - AO356_03795 0.16 +0.7 840,933 - AO356_03795 0.16 +0.1
Or see this region's nucleotide sequence