Strain Fitness in Pantoea sp. MT58 around IAI47_16190

Experiment: Manganese (II) chloride tetrahydrate 50 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Manganese (II) chloride tetrahydrate 50 uM, anaerobic
3,428,175	-		IAI47_16185	0.32	-1.5
3,428,196	+		IAI47_16185	0.34	-1.0
3,428,196	+		IAI47_16185	0.34	+1.1
3,428,197	-		IAI47_16185	0.34	-3.0
3,428,486	+		IAI47_16185	0.56	+0.1
3,428,487	-		IAI47_16185	0.56	-1.5
3,428,528	+		IAI47_16185	0.59	+0.9
3,428,528	+		IAI47_16185	0.59	+4.3
3,428,528	+		IAI47_16185	0.59	-0.3
3,428,529	-		IAI47_16185	0.59	-0.8
3,428,529	-		IAI47_16185	0.59	+0.0
3,428,529	-		IAI47_16185	0.59	+0.2
3,428,529	-		IAI47_16185	0.59	-0.0
3,428,560	-		IAI47_16185	0.62	-0.0
3,428,609	+		IAI47_16185	0.65	-0.4
3,428,609	+		IAI47_16185	0.65	+0.1
3,428,615	+		IAI47_16185	0.66	-1.6
3,428,615	+		IAI47_16185	0.66	+0.5
3,428,615	+		IAI47_16185	0.66	+0.3
3,428,615	+		IAI47_16185	0.66	+1.0
3,428,615	+		IAI47_16185	0.66	+0.6
3,428,616	-		IAI47_16185	0.66	-2.2
3,428,616	-		IAI47_16185	0.66	-0.0
3,428,616	-		IAI47_16185	0.66	+0.0
3,428,617	+		IAI47_16185	0.66	+2.0
3,428,617	+		IAI47_16185	0.66	+2.1
3,428,617	+		IAI47_16185	0.66	-0.8
3,428,618	-		IAI47_16185	0.66	-1.3
3,428,618	-		IAI47_16185	0.66	+0.8
3,428,618	-		IAI47_16185	0.66	-0.2
3,428,618	-		IAI47_16185	0.66	+0.2
3,428,618	-		IAI47_16185	0.66	+0.4
3,428,682	+		IAI47_16185	0.71	-1.2
3,428,682	+		IAI47_16185	0.71	-2.1
3,428,682	+		IAI47_16185	0.71	+0.7
3,428,682	+		IAI47_16185	0.71	-1.6
3,428,683	-		IAI47_16185	0.71	-0.1
3,428,757	+		IAI47_16185	0.77	+0.5
3,428,757	+		IAI47_16185	0.77	+1.4
3,428,757	+		IAI47_16185	0.77	+0.7
3,428,757	+		IAI47_16185	0.77	-0.4
3,428,757	+		IAI47_16185	0.77	-1.2
3,428,757	+		IAI47_16185	0.77	-1.8
3,428,758	-		IAI47_16185	0.77	+0.9
3,428,758	-		IAI47_16185	0.77	+0.7
3,428,758	-		IAI47_16185	0.77	-1.8
3,428,784	-		IAI47_16185	0.79	+0.0
3,428,784	-		IAI47_16185	0.79	+0.3
3,428,863	+		IAI47_16185	0.85	+1.0
3,428,915	+		IAI47_16185	0.89	-0.5
3,428,915	+		IAI47_16185	0.89	-1.4
3,428,915	+		IAI47_16185	0.89	-0.4
3,428,916	-		IAI47_16185	0.89	+1.8
3,428,977	+				+0.4
3,428,978	-				+0.1
3,429,022	+				+0.6
3,429,022	+				-0.1
3,429,022	+				-0.7
3,429,022	+				+1.1
3,429,023	-				+0.7
3,429,023	-				-1.3
3,429,062	+				-0.2
3,429,062	+				+0.6
3,429,063	-				-0.3
3,429,063	-				-0.7
3,429,063	-				-0.8
3,429,065	+				+0.1
3,429,065	+				+1.0
3,429,066	-				-0.1
3,429,098	+				-2.2
3,429,104	+				-0.6
3,429,105	-				-0.7
3,429,107	+				+0.1
3,429,108	-				+0.7
3,429,109	+				-0.2
3,429,110	-				+1.2
3,429,142	+				+0.7
3,429,147	+				+0.8
3,429,166	-				+0.5
3,429,170	-				-0.9
3,429,173	+				+0.7
3,429,173	+				-3.0
3,429,173	+				-0.4
3,429,173	+				-2.7
3,429,186	+				+0.7
3,429,187	-				-0.9
3,429,187	-				-0.5
3,429,187	-				+1.2
3,429,197	+				-0.5
3,429,198	-				+1.3
3,429,238	+		IAI47_16190	0.12	-1.5
3,429,238	+		IAI47_16190	0.12	-1.6
3,429,239	-		IAI47_16190	0.12	-0.6
3,429,239	-		IAI47_16190	0.12	-2.3
3,429,258	+		IAI47_16190	0.15	-2.6
3,429,259	-		IAI47_16190	0.15	-2.8
3,429,259	-		IAI47_16190	0.15	-1.2
3,429,297	+		IAI47_16190	0.22	-0.5
3,429,298	-		IAI47_16190	0.22	-1.8
3,429,390	+		IAI47_16190	0.38	-2.1
3,429,543	+		IAI47_16190	0.64	+1.4
3,429,543	+		IAI47_16190	0.64	+0.4
3,429,544	-		IAI47_16190	0.64	+0.8
3,429,546	+		IAI47_16190	0.64	-1.2
3,429,546	+		IAI47_16190	0.64	+0.7
3,429,546	+		IAI47_16190	0.64	-3.5
3,429,546	+		IAI47_16190	0.64	-2.0
3,429,547	-		IAI47_16190	0.64	-1.9
3,429,697	+				-1.0
3,429,697	+				-0.4
3,429,697	+				+0.5
3,429,697	+				-3.9
3,429,697	+				-2.8
3,429,697	+				-0.1
3,429,697	+				-0.5
3,429,697	+				-0.7
3,429,697	+				-1.1
3,429,697	+				+0.1
3,429,698	-				-2.2
3,429,698	-				-2.9
3,429,698	-				-1.8
3,429,728	-				+1.2
3,429,744	+				-1.5
3,429,744	+				-0.3
3,429,744	+				+1.6
3,429,744	+				-1.3
3,429,749	+				-0.5
3,429,749	+				-2.1
3,429,749	+				-1.9
3,429,749	+				-1.5
3,429,749	+				-3.5
3,429,749	+				-1.6
3,429,749	+				+0.1
3,429,749	+				-1.4
3,429,750	-				-1.0
3,429,750	-				-2.7
3,429,750	-				-0.8
3,429,750	-				-2.7
3,429,750	-				-1.0
3,429,750	-				-2.4
3,429,759	+				-1.2
3,429,759	+				+0.3
3,429,759	+				-1.5
3,429,759	+				+0.2
3,429,760	-				-1.4
3,429,760	-				-0.2
3,429,760	-				+1.6
3,429,760	-				+1.4
3,429,794	-				+1.6
3,429,794	-				+0.9
3,429,794	-				-1.2
3,429,816	+				-0.0
3,429,816	+				-0.8
3,429,816	+				+0.4
3,429,816	+				+1.2
3,429,817	-				-0.3
3,429,817	-				+0.6
3,429,817	-				-0.9
3,429,819	+				+0.1
3,429,819	+				+0.1
3,429,819	+				+0.3
3,429,819	+				-2.0
3,429,819	+				-2.7
3,429,819	+				+1.2
3,429,819	+				+1.8
3,429,819	+				-0.1
3,429,819	+				+0.7
3,429,819	+				+0.7
3,429,819	+				-2.7
3,429,820	-				+0.1
3,429,820	-				-0.6
3,429,820	-				-0.4
3,429,820	-				-1.7
3,429,820	-				-0.8
3,429,820	-				-3.4
3,429,820	-				-0.8
3,429,820	-				-1.9
3,429,821	+				-1.0
3,429,821	+				+2.3
3,429,821	+				+0.1
3,429,821	+				+1.1
3,429,821	+				-0.4
3,429,821	+				+0.4
3,429,822	-				+0.4
3,429,822	-				-0.2
3,429,822	-				-1.6
3,429,822	-				-0.9
3,429,822	-				+0.2
3,429,941	-				+0.2
3,429,967	+				-1.0
3,429,967	+				-1.0
3,429,967	+				-1.1
3,429,968	-				-2.0
3,430,041	+		IAI47_16195	0.17	+1.5
3,430,041	+		IAI47_16195	0.17	+0.2
3,430,041	+		IAI47_16195	0.17	-0.5
3,430,041	+		IAI47_16195	0.17	-0.9
3,430,042	-		IAI47_16195	0.17	+0.4
3,430,051	+		IAI47_16195	0.18	+0.1
3,430,051	+		IAI47_16195	0.18	+2.6
3,430,182	+		IAI47_16195	0.32	-2.0
3,430,197	+		IAI47_16195	0.33	+0.9
3,430,197	+		IAI47_16195	0.33	-1.4
3,430,197	+		IAI47_16195	0.33	-0.1
3,430,197	+		IAI47_16195	0.33	+1.1
3,430,198	-		IAI47_16195	0.33	-0.6
3,430,198	-		IAI47_16195	0.33	+0.5
3,430,198	-		IAI47_16195	0.33	+0.1
3,430,200	+		IAI47_16195	0.33	+0.5
3,430,200	+		IAI47_16195	0.33	+1.1
3,430,200	+		IAI47_16195	0.33	-0.1
3,430,200	+		IAI47_16195	0.33	-0.2
3,430,200	+		IAI47_16195	0.33	+2.1
3,430,200	+		IAI47_16195	0.33	+0.4
3,430,200	+		IAI47_16195	0.33	+2.1
3,430,200	+		IAI47_16195	0.33	+0.9
3,430,200	+		IAI47_16195	0.33	-0.4
3,430,201	-		IAI47_16195	0.34	-0.4
3,430,201	-		IAI47_16195	0.34	+1.9
3,430,201	-		IAI47_16195	0.34	+1.3
3,430,201	-		IAI47_16195	0.34	-2.5
3,430,206	+		IAI47_16195	0.34	-1.8
3,430,207	-		IAI47_16195	0.34	-0.2
3,430,251	+		IAI47_16195	0.39	-1.7
3,430,251	+		IAI47_16195	0.39	-0.7
3,430,252	-		IAI47_16195	0.39	+0.3
3,430,252	-		IAI47_16195	0.39	-1.5
3,430,262	-		IAI47_16195	0.40	+0.7
3,430,262	-		IAI47_16195	0.40	+0.3
3,430,276	+		IAI47_16195	0.41	+1.5
3,430,276	+		IAI47_16195	0.41	+0.3
3,430,277	-		IAI47_16195	0.42	+0.2
3,430,278	+		IAI47_16195	0.42	+1.3
3,430,279	-		IAI47_16195	0.42	+0.1
3,430,279	-		IAI47_16195	0.42	-1.9
3,430,279	-		IAI47_16195	0.42	+2.1
3,430,375	+		IAI47_16195	0.52	+0.8
3,430,375	+		IAI47_16195	0.52	+1.0
3,430,375	+		IAI47_16195	0.52	-0.5
3,430,375	+		IAI47_16195	0.52	-0.3
3,430,376	-		IAI47_16195	0.52	-2.6
3,430,384	+		IAI47_16195	0.53	-0.6
3,430,384	+		IAI47_16195	0.53	+0.2
3,430,384	+		IAI47_16195	0.53	+0.2
3,430,384	+		IAI47_16195	0.53	+1.1
3,430,384	+		IAI47_16195	0.53	+1.7
3,430,385	-		IAI47_16195	0.53	-0.2
3,430,385	-		IAI47_16195	0.53	+3.5
3,430,429	+		IAI47_16195	0.57	+0.3
3,430,430	-		IAI47_16195	0.58	+0.5
3,430,430	-		IAI47_16195	0.58	+0.7
3,430,466	-		IAI47_16195	0.61	+0.0
3,430,479	+		IAI47_16195	0.63	+1.6
3,430,479	+		IAI47_16195	0.63	+1.1
3,430,480	-		IAI47_16195	0.63	+1.7
3,430,527	+		IAI47_16195	0.68	+1.7
3,430,527	+		IAI47_16195	0.68	-0.3
3,430,527	+		IAI47_16195	0.68	-0.8
3,430,527	+		IAI47_16195	0.68	-0.5
3,430,528	-		IAI47_16195	0.68	-0.1
3,430,528	-		IAI47_16195	0.68	+0.2
3,430,528	-		IAI47_16195	0.68	+0.2
3,430,666	+		IAI47_16195	0.82	-1.5
3,430,667	-		IAI47_16195	0.82	-2.7
3,430,667	-		IAI47_16195	0.82	+2.7
3,430,667	-		IAI47_16195	0.82	+0.7
3,430,667	-		IAI47_16195	0.82	-2.8
3,430,667	-		IAI47_16195	0.82	+0.6
3,430,687	+		IAI47_16195	0.84	-1.1
3,430,688	-		IAI47_16195	0.85	+0.6
3,430,693	-		IAI47_16195	0.85	+0.3
3,430,755	+				+0.6
3,430,755	+				+0.4
3,430,755	+				-0.5
3,430,755	+				-0.5