Strain Fitness in Rahnella sp. WP5 around EX31_RS14160

Experiment: Sucrose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C)
6,864	-		EX31_RS14150	0.76	+0.0
6,884	+		EX31_RS14150	0.77	+0.8
6,884	+		EX31_RS14150	0.77	+0.7
6,885	-		EX31_RS14150	0.77	+0.5
6,885	-		EX31_RS14150	0.77	-0.3
6,885	-		EX31_RS14150	0.77	-0.0
6,905	+		EX31_RS14150	0.78	-0.1
6,905	+		EX31_RS14150	0.78	+0.3
6,905	+		EX31_RS14150	0.78	-0.1
6,905	+		EX31_RS14150	0.78	+0.2
6,906	-		EX31_RS14150	0.78	+0.1
6,906	-		EX31_RS14150	0.78	-0.4
6,906	-		EX31_RS14150	0.78	+0.2
6,906	-		EX31_RS14150	0.78	-2.1
6,917	+		EX31_RS14150	0.79	+0.3
6,917	+		EX31_RS14150	0.79	+1.0
6,917	+		EX31_RS14150	0.79	+1.2
6,917	+		EX31_RS14150	0.79	+1.1
6,917	+		EX31_RS14150	0.79	-0.7
6,917	+		EX31_RS14150	0.79	+0.9
6,918	-		EX31_RS14150	0.79	+0.0
6,918	-		EX31_RS14150	0.79	+0.4
6,918	-		EX31_RS14150	0.79	+0.9
6,920	+		EX31_RS14150	0.79	+0.6
6,920	+		EX31_RS14150	0.79	+1.2
6,920	+		EX31_RS14150	0.79	-0.2
6,921	-		EX31_RS14150	0.79	+0.2
6,921	-		EX31_RS14150	0.79	+0.2
6,921	-		EX31_RS14150	0.79	+1.8
6,921	-		EX31_RS14150	0.79	-0.4
6,926	+		EX31_RS14150	0.80	+1.1
6,926	+		EX31_RS14150	0.80	+0.2
6,926	+		EX31_RS14150	0.80	+2.2
6,926	+		EX31_RS14150	0.80	-0.1
6,927	-		EX31_RS14150	0.80	+0.5
6,927	-		EX31_RS14150	0.80	+0.7
6,927	-		EX31_RS14150	0.80	+0.6
6,927	-		EX31_RS14150	0.80	+1.3
6,927	-		EX31_RS14150	0.80	+0.6
6,927	-		EX31_RS14150	0.80	+0.5
7,038	+		EX31_RS14150	0.87	-1.3
7,039	-		EX31_RS14150	0.87	-0.3
7,049	+		EX31_RS14150	0.87	-0.7
7,101	+				+0.1
7,101	+				-1.1
7,102	-				+1.5
7,142	+				-0.2
7,143	-				+1.2
7,143	-				+1.4
7,143	-				+0.0
7,153	+				+0.4
7,154	-				-1.3
7,154	-				-0.9
7,217	+				+0.6
7,217	+				+0.7
7,218	-				+0.2
7,221	+				-2.0
7,221	+				+0.6
7,221	+				+0.3
7,222	-				-0.2
7,222	-				+1.2
7,266	+				-0.7
7,266	+				-1.6
7,267	-				-0.5
7,267	-				-0.5
7,275	+				+0.6
7,275	+				+0.5
7,275	+				-0.2
7,275	+				-0.3
7,275	+				+0.4
7,275	+				+1.6
7,275	+				-1.4
7,276	-				-0.1
7,276	-				+1.0
7,276	-				+0.4
7,276	-				-2.5
7,276	-				+0.4
7,276	-				-0.6
7,277	+				+0.1
7,277	+				-0.6
7,277	+				+1.1
7,278	-				+0.5
7,278	-				-1.0
7,283	+				-0.7
7,283	+				-0.2
7,284	-				+0.7
7,304	+				+0.4
7,304	+				-1.5
7,304	+				-0.4
7,305	-				+1.2
7,305	-				-0.3
7,305	-				+0.9
7,413	+				-0.1
7,475	-				+2.2
7,524	+				-0.5
7,524	+				+0.1
7,524	+				+1.0
7,524	+				+1.0
7,524	+				-1.0
7,524	+				+1.2
7,524	+				-1.6
7,525	-				+0.2
7,525	-				-0.8
7,525	-				+1.5
7,525	-				+0.3
7,525	-				+0.9
7,525	-				+0.9
7,540	+				+0.9
7,540	+				+1.1
7,541	-				-0.2
7,541	-				+0.7
7,562	+		EX31_RS14155	0.11	+0.2
7,562	+		EX31_RS14155	0.11	-1.0
7,563	-		EX31_RS14155	0.11	-1.4
7,647	+		EX31_RS14155	0.34	-0.1
7,647	+		EX31_RS14155	0.34	-1.0
7,648	-		EX31_RS14155	0.35	+0.0
7,648	-		EX31_RS14155	0.35	+0.6
7,720	-		EX31_RS14155	0.55	+0.3
7,737	+		EX31_RS14155	0.59	+0.4
7,738	-		EX31_RS14155	0.60	+0.0
7,738	-		EX31_RS14155	0.60	-1.7
7,738	-		EX31_RS14155	0.60	+0.4
7,782	-		EX31_RS14155	0.72	+0.3
7,817	-		EX31_RS14155	0.82	+0.1
7,817	-		EX31_RS14155	0.82	+0.6
7,817	-		EX31_RS14155	0.82	-2.0
7,890	-				+0.7
7,890	-				-0.0
7,890	-				+0.2
7,890	-				+1.1
7,890	-				+0.9
7,901	+				+1.7
7,902	-				+0.8
7,902	-				+0.1
7,902	-				+0.3
7,902	-				-0.4
7,902	-				+0.1
7,903	-				+0.2
7,904	+				-0.9
7,904	+				+0.0
7,905	-				+1.3
7,905	-				+0.2
7,905	-				+0.3
7,905	-				+1.4
7,905	-				+0.5
7,905	-				-0.8
7,946	-		EX31_RS14160	0.13	+0.8
7,952	-		EX31_RS14160	0.14	-1.0
7,952	-		EX31_RS14160	0.14	-0.8
7,954	+		EX31_RS14160	0.14	-0.2
7,954	+		EX31_RS14160	0.14	-0.9
7,955	-		EX31_RS14160	0.14	+1.3
7,955	-		EX31_RS14160	0.14	-0.9
7,955	-		EX31_RS14160	0.14	+0.2
8,021	+		EX31_RS14160	0.24	-2.6
8,090	+		EX31_RS14160	0.34	-2.1
8,091	-		EX31_RS14160	0.34	+1.2
8,091	-		EX31_RS14160	0.34	+1.2
8,106	-		EX31_RS14160	0.37	-2.0
8,125	+		EX31_RS14160	0.39	-1.1
8,125	+		EX31_RS14160	0.39	+1.2
8,125	+		EX31_RS14160	0.39	+0.2
8,126	-		EX31_RS14160	0.40	-1.4
8,145	-		EX31_RS14160	0.42	-3.0
8,208	+		EX31_RS14160	0.52	-2.0
8,208	+		EX31_RS14160	0.52	-0.1
8,208	+		EX31_RS14160	0.52	-0.5
8,209	-		EX31_RS14160	0.52	-0.4
8,209	-		EX31_RS14160	0.52	-2.1
8,392	+		EX31_RS14160	0.79	-1.4
8,393	-		EX31_RS14160	0.79	-0.5
8,457	-		EX31_RS14160	0.88	-3.2
8,468	+		EX31_RS14160	0.90	+0.2
8,468	+		EX31_RS14160	0.90	-2.1
8,468	+		EX31_RS14160	0.90	+0.6
8,468	+		EX31_RS14160	0.90	-1.7
8,468	+		EX31_RS14160	0.90	+1.2
8,469	-		EX31_RS14160	0.90	-0.2
8,469	-		EX31_RS14160	0.90	-0.9
8,469	-		EX31_RS14160	0.90	-0.4
8,530	-				-0.8
8,552	+				-0.4
8,553	-				-0.0
8,555	+				-2.0
8,555	+				-0.8
8,555	+				+1.2
8,555	+				+0.7
8,556	-				+0.9
8,556	-				-1.7
8,593	+				-0.7
8,593	+				-1.6
8,593	+				-0.5
8,593	+				-0.5
8,594	-				+0.4
8,594	-				+0.3
8,594	-				+0.9
8,595	+				+0.4
8,595	+				-0.3
8,596	-				-0.3
8,596	-				-0.8
8,596	-				-0.4
8,626	+				+1.0
8,626	+				+0.1
8,626	+				+0.1
8,626	+				-0.4
8,626	+				-0.3
8,626	+				-0.2
8,626	+				+0.3
8,627	-				+0.5
8,627	-				+1.1
8,627	-				-0.1
8,627	-				+0.2
8,627	-				-0.4
8,627	-				-0.9
8,627	-				+1.8
8,627	-				-0.6
8,627	-				+0.1
8,627	-				+1.2
8,636	+				+1.2
8,636	+				+0.6
8,637	-				-1.0
8,637	-				+1.0
8,637	-				+2.2
8,637	-				+0.4
8,637	-				+1.3
8,637	-				+0.2
8,637	-				+2.3
8,662	+				+0.8
8,662	+				-0.7
8,668	+				+1.0
8,669	-				-0.4
8,691	-				+1.8
8,694	+				+0.6
8,694	+				-1.1
8,694	+				-0.0
8,694	+				+0.9
8,694	+				-0.3
8,694	+				-0.2
8,695	-				-0.1
8,695	-				+1.4
8,695	-				-1.7
8,695	-				+0.3
8,695	-				-1.3
8,700	+				+0.5
8,700	+				-0.8
8,700	+				-0.6
8,701	-				+1.2
8,703	+				-1.5
8,703	+				+0.1
8,703	+				+0.7
8,704	-				+0.6
8,704	-				-0.1
8,704	-				-1.7
8,704	-				-0.2
8,704	-				+0.7
8,704	-				-0.8
8,737	+				+0.1
8,861	+				-0.0
8,861	+				-0.6
8,862	-				-1.2
8,862	-				-1.2
8,862	-				-0.3
8,863	+				+1.2
8,863	+				+0.8
8,864	-				+0.3
8,884	+				-0.4
8,884	+				-1.0
8,884	+				+2.8
8,885	-				+0.7
8,885	-				-1.9
8,885	-				+4.2
8,885	-				-1.6
8,916	+		EX31_RS14165	0.12	+1.2
8,963	+		EX31_RS14165	0.15	+1.3
8,963	+		EX31_RS14165	0.15	+0.2
8,964	-		EX31_RS14165	0.15	-0.1
8,964	-		EX31_RS14165	0.15	+0.0
8,971	+		EX31_RS14165	0.16	+1.6
8,971	+		EX31_RS14165	0.16	+0.3
8,972	-		EX31_RS14165	0.16	+1.5
8,983	+		EX31_RS14165	0.17	+0.5
8,983	+		EX31_RS14165	0.17	-2.1
8,984	-		EX31_RS14165	0.17	-1.4
8,984	-		EX31_RS14165	0.17	+0.0
9,028	+		EX31_RS14165	0.20	+0.4
9,031	+		EX31_RS14165	0.20	+0.8
9,032	-		EX31_RS14165	0.20	+2.2
9,032	-		EX31_RS14165	0.20	-1.3
9,032	-		EX31_RS14165	0.20	-0.4
9,046	+		EX31_RS14165	0.21	+0.0
9,046	+		EX31_RS14165	0.21	+0.2
9,046	+		EX31_RS14165	0.21	-0.4
9,047	-		EX31_RS14165	0.21	+0.6
9,047	-		EX31_RS14165	0.21	-0.4
9,062	+		EX31_RS14165	0.22	+0.1
9,142	+		EX31_RS14165	0.28	+0.3
9,161	-		EX31_RS14165	0.29	-1.1
9,169	+		EX31_RS14165	0.30	+0.1
9,169	+		EX31_RS14165	0.30	-1.1
9,239	+		EX31_RS14165	0.35	-0.7
9,239	+		EX31_RS14165	0.35	+0.1
9,240	-		EX31_RS14165	0.35	+0.8
9,289	+		EX31_RS14165	0.38	-1.4
9,290	-		EX31_RS14165	0.39	+0.0
9,320	+		EX31_RS14165	0.41	+0.1
9,360	+		EX31_RS14165	0.44	+1.4
9,360	+		EX31_RS14165	0.44	-1.5
9,361	-		EX31_RS14165	0.44	-0.8
9,361	-		EX31_RS14165	0.44	+1.0
9,361	-		EX31_RS14165	0.44	-0.2
9,361	-		EX31_RS14165	0.44	-1.1
9,437	-		EX31_RS14165	0.49	+0.4
9,437	-		EX31_RS14165	0.49	-0.5
9,511	+		EX31_RS14165	0.54	-0.1
9,511	+		EX31_RS14165	0.54	+0.3
9,511	+		EX31_RS14165	0.54	+0.6
9,511	+		EX31_RS14165	0.54	-1.4
9,512	-		EX31_RS14165	0.54	-0.4
9,512	-		EX31_RS14165	0.54	+0.3