Strain Fitness in Rahnella sp. WP5 around EX31_RS13390

Experiment: Sucrose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C)
112,927	+		EX31_RS13385	0.65	+0.2
112,927	+		EX31_RS13385	0.65	+0.3
112,928	-		EX31_RS13385	0.65	+1.1
112,990	-		EX31_RS13385	0.69	+0.4
112,990	-		EX31_RS13385	0.69	-2.4
113,002	+		EX31_RS13385	0.70	-1.1
113,002	+		EX31_RS13385	0.70	+1.6
113,002	+		EX31_RS13385	0.70	-0.9
113,002	+		EX31_RS13385	0.70	+1.0
113,003	-		EX31_RS13385	0.70	+0.3
113,003	-		EX31_RS13385	0.70	+0.2
113,003	-		EX31_RS13385	0.70	+0.7
113,023	+		EX31_RS13385	0.72	+0.6
113,024	-		EX31_RS13385	0.72	+2.2
113,086	+		EX31_RS13385	0.76	-0.4
113,086	+		EX31_RS13385	0.76	+0.2
113,086	+		EX31_RS13385	0.76	+0.2
113,086	+		EX31_RS13385	0.76	+1.2
113,087	-		EX31_RS13385	0.76	-0.1
113,167	+		EX31_RS13385	0.82	-0.0
113,167	+		EX31_RS13385	0.82	-0.1
113,168	-		EX31_RS13385	0.83	+0.9
113,168	-		EX31_RS13385	0.83	+1.6
113,168	-		EX31_RS13385	0.83	-1.1
113,252	+		EX31_RS13385	0.89	+1.4
113,351	+				+0.9
113,403	-				-1.4
113,425	+				-0.4
113,425	+				+0.8
113,425	+				+0.2
113,425	+				+0.4
113,425	+				-0.8
113,425	+				-0.3
113,425	+				+1.6
113,425	+				-1.1
113,425	+				+0.7
113,425	+				+0.5
113,425	+				-1.3
113,425	+				-0.2
113,426	-				+1.0
113,426	-				+0.8
113,426	-				-2.1
113,426	-				+0.7
113,426	-				+0.1
113,426	-				+0.2
113,582	+				+0.3
113,582	+				-0.7
113,582	+				-0.2
113,583	-				-0.4
113,583	-				+0.9
113,583	-				+1.0
113,583	-				+1.7
113,592	-				-1.0
113,597	-				+0.3
113,613	+				-1.3
113,613	+				+1.1
113,613	+				-0.2
113,613	+				-0.3
113,613	+				-0.9
113,613	+				-3.6
113,613	+				-0.5
113,613	+				-2.1
113,613	+				+1.2
113,613	+				-0.1
113,613	+				+0.5
113,614	-				-0.0
113,614	-				+1.5
113,614	-				+0.7
113,614	-				+0.0
113,614	-				+0.4
113,614	-				-1.7
113,614	-				-1.1
113,614	-				-1.0
113,614	-				+0.7
113,614	-				+0.0
113,614	-				-2.1
113,614	-				+0.8
113,620	-				-1.6
113,620	-				-0.9
113,626	+				-1.5
113,626	+				+0.8
113,713	+				-0.7
113,713	+				+0.9
113,765	+				+0.5
113,765	+				-0.3
113,766	-				-0.7
113,778	+				+0.9
113,779	-				+0.4
113,779	-				-0.6
113,785	+				-1.4
113,785	+				-1.1
113,785	+				-1.0
113,785	+				+0.3
113,786	-				-0.6
113,786	-				-1.9
113,786	-				+0.7
113,787	+				-0.1
113,787	+				-0.0
113,787	+				-1.1
113,788	-				+0.1
113,788	-				+1.5
113,791	+				-0.7
113,791	+				+0.5
113,792	-				+1.6
113,792	-				-1.4
113,796	+				-0.9
113,797	-				-0.1
113,797	-				+1.9
113,797	-				-0.5
113,797	-				+0.6
113,797	-				+1.9
113,799	-				-0.5
113,824	+				-0.4
113,949	+				+0.6
113,958	+		EX31_RS13390	0.10	-0.3
113,958	+		EX31_RS13390	0.10	+0.9
113,958	+		EX31_RS13390	0.10	+1.8
113,958	+		EX31_RS13390	0.10	-0.4
113,959	-		EX31_RS13390	0.10	+0.5
113,966	-		EX31_RS13390	0.11	+0.4
113,976	+		EX31_RS13390	0.12	-0.5
113,976	+		EX31_RS13390	0.12	+0.5
113,976	+		EX31_RS13390	0.12	+0.7
113,976	+		EX31_RS13390	0.12	+1.1
113,976	+		EX31_RS13390	0.12	-2.2
113,976	+		EX31_RS13390	0.12	+0.3
113,976	+		EX31_RS13390	0.12	+0.5
113,976	+		EX31_RS13390	0.12	+0.2
113,976	+		EX31_RS13390	0.12	+0.5
113,976	+		EX31_RS13390	0.12	+0.9
113,976	+		EX31_RS13390	0.12	+0.9
113,976	+		EX31_RS13390	0.12	-0.3
113,977	-		EX31_RS13390	0.12	-0.7
113,977	-		EX31_RS13390	0.12	-0.2
113,977	-		EX31_RS13390	0.12	+0.6
113,977	-		EX31_RS13390	0.12	-0.3
113,977	-		EX31_RS13390	0.12	+2.7
113,977	-		EX31_RS13390	0.12	+0.2
113,978	+		EX31_RS13390	0.13	-0.0
113,978	+		EX31_RS13390	0.13	+0.6
113,979	-		EX31_RS13390	0.13	+0.9
113,979	-		EX31_RS13390	0.13	-0.3
113,979	-		EX31_RS13390	0.13	+1.1
114,048	+		EX31_RS13390	0.21	-0.6
114,048	+		EX31_RS13390	0.21	-0.1
114,098	-		EX31_RS13390	0.27	-1.2
114,113	+		EX31_RS13390	0.29	-0.2
114,113	+		EX31_RS13390	0.29	-0.2
114,113	+		EX31_RS13390	0.29	+0.8
114,114	-		EX31_RS13390	0.29	+1.0
114,182	+		EX31_RS13390	0.37	-1.9
114,183	-		EX31_RS13390	0.37	-0.1
114,203	+		EX31_RS13390	0.40	+0.4
114,204	-		EX31_RS13390	0.40	+0.4
114,204	-		EX31_RS13390	0.40	-0.8
114,204	-		EX31_RS13390	0.40	+1.5
114,247	+		EX31_RS13390	0.45	-0.1
114,247	+		EX31_RS13390	0.45	-0.4
114,247	+		EX31_RS13390	0.45	-0.3
114,247	+		EX31_RS13390	0.45	+0.0
114,248	-		EX31_RS13390	0.45	+0.1
114,250	+		EX31_RS13390	0.45	-0.4
114,276	-		EX31_RS13390	0.48	+0.8
114,276	-		EX31_RS13390	0.48	+1.3
114,400	+		EX31_RS13390	0.63	-1.5
114,400	+		EX31_RS13390	0.63	-0.7
114,400	+		EX31_RS13390	0.63	+0.2
114,401	-		EX31_RS13390	0.63	+0.6
114,401	-		EX31_RS13390	0.63	+1.6
114,401	-		EX31_RS13390	0.63	+1.0
114,414	+		EX31_RS13390	0.65	+0.9
114,414	+		EX31_RS13390	0.65	+0.3
114,414	+		EX31_RS13390	0.65	+1.3
114,415	-		EX31_RS13390	0.65	+1.2
114,415	-		EX31_RS13390	0.65	+2.0
114,415	-		EX31_RS13390	0.65	-0.7
114,415	-		EX31_RS13390	0.65	+0.9
114,415	-		EX31_RS13390	0.65	+0.4
114,468	-		EX31_RS13390	0.71	-0.1
114,480	+		EX31_RS13390	0.73	+0.2
114,480	+		EX31_RS13390	0.73	+1.0
114,522	+		EX31_RS13390	0.78	+0.7
114,522	+		EX31_RS13390	0.78	-0.4
114,523	-		EX31_RS13390	0.78	-0.5
114,578	+		EX31_RS13390	0.85	+0.3
114,590	+		EX31_RS13390	0.86	+1.8
114,591	-		EX31_RS13390	0.86	+0.5
114,591	-		EX31_RS13390	0.86	+0.3
114,591	-		EX31_RS13390	0.86	+0.6
114,591	-		EX31_RS13390	0.86	+1.0
114,644	+				-0.4
114,644	+				-2.0
114,645	-				-0.8
114,738	+				-0.5
114,738	+				-0.7
114,738	+				+1.7
114,856	-		EX31_RS13395	0.28	-1.1
114,856	-		EX31_RS13395	0.28	-0.3
114,857	+		EX31_RS13395	0.29	-0.8
114,858	-		EX31_RS13395	0.29	-0.6
114,893	-		EX31_RS13395	0.35	+1.0
114,932	+		EX31_RS13395	0.42	+0.8
114,963	-		EX31_RS13395	0.48	-1.2
114,975	+		EX31_RS13395	0.50	-0.4
114,976	-		EX31_RS13395	0.50	+1.0
114,976	-		EX31_RS13395	0.50	+0.5
114,976	-		EX31_RS13395	0.50	+1.5
115,021	+		EX31_RS13395	0.59	+0.5
115,022	-		EX31_RS13395	0.59	+0.9
115,208	+				+1.2
115,208	+				+2.2
115,208	+				+1.8
115,209	-				-0.8
115,209	-				+0.2
115,209	-				+0.3
115,256	+				+0.3
115,257	-				-0.8
115,262	+				+0.1
115,328	+				+0.6
115,373	+		EX31_RS13400	0.14	-0.5
115,374	-		EX31_RS13400	0.14	+0.4
115,374	-		EX31_RS13400	0.14	-0.5
115,433	+		EX31_RS13400	0.24	+0.5
115,599	-		EX31_RS13400	0.54	-1.6
115,664	+		EX31_RS13400	0.66	-0.7
115,665	-		EX31_RS13400	0.66	-0.1
115,697	-		EX31_RS13400	0.72	-1.5