Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12840

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
2,923,586	-				+0.9
2,923,819	-		AO356_12835	0.15	-0.2
2,923,819	-		AO356_12835	0.15	+0.4
2,923,895	+		AO356_12835	0.28	-0.4
2,924,076	+		AO356_12835	0.59	-0.7
2,924,076	+		AO356_12835	0.59	-0.5
2,924,076	+		AO356_12835	0.59	+1.4
2,924,076	+		AO356_12835	0.59	+0.2
2,924,076	+		AO356_12835	0.59	+1.1
2,924,076	+		AO356_12835	0.59	+0.6
2,924,076	+		AO356_12835	0.59	+0.8
2,924,077	-		AO356_12835	0.59	-1.2
2,924,077	-		AO356_12835	0.59	-0.2
2,924,077	-		AO356_12835	0.59	-0.4
2,924,175	+		AO356_12835	0.76	+1.1
2,924,175	+		AO356_12835	0.76	-1.4
2,924,175	+		AO356_12835	0.76	+0.3
2,924,176	-		AO356_12835	0.76	-0.4
2,924,176	-		AO356_12835	0.76	+0.5
2,924,176	-		AO356_12835	0.76	+0.2
2,924,176	-		AO356_12835	0.76	+1.4
2,924,176	-		AO356_12835	0.76	-0.4
2,924,311	-				+0.8
2,924,374	+				+0.5
2,924,374	+				-1.5
2,924,374	+				-0.4
2,924,374	+				+0.7
2,924,374	+				-0.1
2,924,375	-				-0.6
2,924,375	-				-0.3
2,924,375	-				+0.1
2,924,379	+				+0.6
2,924,379	+				+0.4
2,924,379	+				-0.9
2,924,380	-				-1.8
2,924,630	+		AO356_12840	0.34	-1.4
2,924,630	+		AO356_12840	0.34	+0.6
2,924,630	+		AO356_12840	0.34	-1.2
2,924,631	-		AO356_12840	0.34	-1.1
2,924,631	-		AO356_12840	0.34	-1.7
2,924,631	-		AO356_12840	0.34	-0.5
2,924,657	+		AO356_12840	0.38	-0.3
2,924,657	+		AO356_12840	0.38	-0.6
2,924,657	+		AO356_12840	0.38	-0.6
2,924,658	-		AO356_12840	0.39	-0.1
2,924,658	-		AO356_12840	0.39	-1.7
2,924,658	-		AO356_12840	0.39	-0.9
2,924,658	-		AO356_12840	0.39	-1.8
2,924,658	-		AO356_12840	0.39	-0.5
2,924,858	+		AO356_12840	0.70	-1.8
2,924,858	+		AO356_12840	0.70	+1.0
2,924,858	+		AO356_12840	0.70	-0.8
2,924,858	+		AO356_12840	0.70	-1.9
2,924,859	-		AO356_12840	0.70	+0.2
2,924,912	+		AO356_12840	0.79	-1.3
2,924,992	+				-0.9
2,924,993	-				+0.7
2,924,993	-				-1.0
2,924,993	-				+0.0
2,925,044	+				-0.1
2,925,044	+				+0.2
2,925,044	+				+0.3
2,925,045	-				+0.7
2,925,068	-				+2.0
2,925,068	-				+0.2
2,925,068	-				+0.4
2,925,068	-				-0.5
2,925,068	-				+0.0
2,925,068	-				-0.4
2,925,068	-				+1.0
2,925,068	-				-0.4
2,925,128	+				-1.0
2,925,128	+				-0.7
2,925,128	+				+0.3
2,925,129	-				+0.2
2,925,129	-				-1.0
2,925,169	+				+0.9
2,925,169	+				+0.4
2,925,201	+				+0.6
2,925,201	+				+0.3
2,925,201	+				+0.4
2,925,201	+				+0.1
2,925,202	-				+0.0
2,925,202	-				+0.0
2,925,202	-				+0.8
2,925,352	+		AO356_12845	0.30	-0.1
2,925,372	+		AO356_12845	0.32	-0.9
2,925,432	+		AO356_12845	0.40	+1.3
2,925,432	+		AO356_12845	0.40	-0.2
2,925,433	-		AO356_12845	0.41	-0.0
2,925,433	-		AO356_12845	0.41	-0.1
2,925,433	-		AO356_12845	0.41	+0.8
2,925,433	-		AO356_12845	0.41	+1.0
2,925,433	-		AO356_12845	0.41	+0.5
2,925,433	-		AO356_12845	0.41	+2.2
2,925,433	-		AO356_12845	0.41	-1.2
2,925,504	+		AO356_12845	0.50	+0.3
2,925,504	+		AO356_12845	0.50	-0.0
2,925,504	+		AO356_12845	0.50	-0.6
2,925,504	+		AO356_12845	0.50	+0.2
2,925,505	-		AO356_12845	0.50	+0.4
2,925,505	-		AO356_12845	0.50	+0.6
2,925,505	-		AO356_12845	0.50	+0.5
2,925,505	-		AO356_12845	0.50	-0.8
2,925,505	-		AO356_12845	0.50	-0.3
2,925,552	+		AO356_12845	0.57	+1.7
2,925,552	+		AO356_12845	0.57	-0.5
2,925,552	+		AO356_12845	0.57	+1.4
2,925,552	+		AO356_12845	0.57	-0.1
2,925,552	+		AO356_12845	0.57	+0.3
2,925,552	+		AO356_12845	0.57	-0.2
2,925,552	+		AO356_12845	0.57	+0.0
2,925,553	-		AO356_12845	0.57	-0.2
2,925,553	-		AO356_12845	0.57	-0.6
2,925,672	+		AO356_12845	0.73	+0.7
2,925,672	+		AO356_12845	0.73	-0.8
2,925,672	+		AO356_12845	0.73	+0.3
2,925,672	+		AO356_12845	0.73	+1.0
2,925,672	+		AO356_12845	0.73	-0.3
2,925,699	+		AO356_12845	0.76	+0.3
2,925,699	+		AO356_12845	0.76	-0.1
2,925,699	+		AO356_12845	0.76	-1.0
2,925,700	-		AO356_12845	0.76	-0.0
2,925,723	+		AO356_12845	0.80	+0.1
2,925,724	-		AO356_12845	0.80	+0.4
2,925,724	-		AO356_12845	0.80	-0.9
2,925,768	+		AO356_12845	0.86	-0.1
2,925,768	+		AO356_12845	0.86	-0.4
2,925,768	+		AO356_12845	0.86	+0.5
2,925,768	+		AO356_12845	0.86	+0.2
2,925,768	+		AO356_12845	0.86	+0.0
2,925,768	+		AO356_12845	0.86	+0.0
2,925,768	+		AO356_12845	0.86	-1.5
2,925,768	+		AO356_12845	0.86	-0.3
2,925,768	+		AO356_12845	0.86	-1.0
2,925,769	-		AO356_12845	0.86	+1.1
2,925,769	-		AO356_12845	0.86	-1.3
2,925,769	-		AO356_12845	0.86	-0.6
2,925,769	-		AO356_12845	0.86	+0.7
2,925,769	-		AO356_12845	0.86	+1.4
2,925,769	-		AO356_12845	0.86	+1.0
2,925,769	-		AO356_12845	0.86	-0.4
2,925,861	-				-0.8
2,925,861	-				+0.2
2,925,966	+		AO356_12850	0.15	-0.2
2,925,966	+		AO356_12850	0.15	-0.2
2,925,967	-		AO356_12850	0.15	-0.6
2,925,967	-		AO356_12850	0.15	+1.8
2,925,967	-		AO356_12850	0.15	-0.3
2,925,981	+		AO356_12850	0.18	-0.4
2,925,981	+		AO356_12850	0.18	+0.1
2,925,981	+		AO356_12850	0.18	+0.7
2,925,981	+		AO356_12850	0.18	-0.1
2,925,981	+		AO356_12850	0.18	+0.3
2,925,982	-		AO356_12850	0.18	+1.3
2,925,982	-		AO356_12850	0.18	-0.2
2,925,982	-		AO356_12850	0.18	-0.1
2,925,982	-		AO356_12850	0.18	-0.9
2,925,982	-		AO356_12850	0.18	-0.1
2,925,982	-		AO356_12850	0.18	+0.2
2,926,029	+		AO356_12850	0.26	-0.7
2,926,029	+		AO356_12850	0.26	+0.1
2,926,030	-		AO356_12850	0.26	+0.3