Experiment: D-Trehalose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03415 and AO356_03420 are separated by 17 nucleotides AO356_03420 and AO356_03425 are separated by 618 nucleotides
AO356_03415: AO356_03415 - oxidoreductase, at 759,884 to 760,834
_03415
AO356_03420: AO356_03420 - UDP-N-acetyl-D-glucosamine dehydrogenase, at 760,852 to 762,165
_03420
AO356_03425: AO356_03425 - chain-length determining protein, at 762,784 to 763,839
_03425
Position (kb) 760
761
762
763 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 760.026 kb on + strand, within AO356_03415 at 760.027 kb on - strand, within AO356_03415 at 760.027 kb on - strand, within AO356_03415 at 760.027 kb on - strand, within AO356_03415 at 760.098 kb on + strand, within AO356_03415 at 760.099 kb on - strand, within AO356_03415 at 760.163 kb on + strand, within AO356_03415 at 760.163 kb on + strand, within AO356_03415 at 760.163 kb on + strand, within AO356_03415 at 760.164 kb on - strand, within AO356_03415 at 760.164 kb on - strand, within AO356_03415 at 760.164 kb on - strand, within AO356_03415 at 760.179 kb on + strand, within AO356_03415 at 760.266 kb on + strand, within AO356_03415 at 760.267 kb on - strand, within AO356_03415 at 760.267 kb on - strand, within AO356_03415 at 760.267 kb on - strand, within AO356_03415 at 760.292 kb on + strand, within AO356_03415 at 760.354 kb on + strand, within AO356_03415 at 760.354 kb on + strand, within AO356_03415 at 760.354 kb on + strand, within AO356_03415 at 760.354 kb on + strand, within AO356_03415 at 760.354 kb on + strand, within AO356_03415 at 760.354 kb on + strand, within AO356_03415 at 760.354 kb on + strand, within AO356_03415 at 760.355 kb on - strand, within AO356_03415 at 760.355 kb on - strand, within AO356_03415 at 760.355 kb on - strand, within AO356_03415 at 760.355 kb on - strand, within AO356_03415 at 760.359 kb on + strand, within AO356_03415 at 760.359 kb on + strand, within AO356_03415 at 760.359 kb on + strand, within AO356_03415 at 760.360 kb on - strand, within AO356_03415 at 760.360 kb on - strand, within AO356_03415 at 760.360 kb on - strand, within AO356_03415 at 760.360 kb on - strand, within AO356_03415 at 760.360 kb on - strand, within AO356_03415 at 760.360 kb on - strand, within AO356_03415 at 760.360 kb on - strand, within AO356_03415 at 760.378 kb on - strand, within AO356_03415 at 760.378 kb on - strand, within AO356_03415 at 760.590 kb on + strand, within AO356_03415 at 760.591 kb on - strand, within AO356_03415 at 760.591 kb on - strand, within AO356_03415 at 760.591 kb on - strand, within AO356_03415 at 760.591 kb on - strand, within AO356_03415 at 760.615 kb on - strand, within AO356_03415 at 760.615 kb on - strand, within AO356_03415 at 760.615 kb on - strand, within AO356_03415 at 760.740 kb on + strand at 760.757 kb on - strand at 760.799 kb on - strand at 760.799 kb on - strand at 760.864 kb on - strand at 760.886 kb on + strand at 760.937 kb on + strand at 760.937 kb on + strand at 760.937 kb on + strand at 760.938 kb on - strand at 760.980 kb on - strand at 761.136 kb on + strand, within AO356_03420 at 761.137 kb on - strand, within AO356_03420 at 761.137 kb on - strand, within AO356_03420 at 761.137 kb on - strand, within AO356_03420 at 761.143 kb on + strand, within AO356_03420 at 761.143 kb on + strand, within AO356_03420 at 761.143 kb on + strand, within AO356_03420 at 761.143 kb on + strand, within AO356_03420 at 761.143 kb on + strand, within AO356_03420 at 761.144 kb on - strand, within AO356_03420 at 761.144 kb on - strand, within AO356_03420 at 761.144 kb on - strand, within AO356_03420 at 761.156 kb on + strand, within AO356_03420 at 761.157 kb on - strand, within AO356_03420 at 761.157 kb on - strand, within AO356_03420 at 761.240 kb on + strand, within AO356_03420 at 761.241 kb on - strand, within AO356_03420 at 761.289 kb on + strand, within AO356_03420 at 761.290 kb on - strand, within AO356_03420 at 761.301 kb on - strand, within AO356_03420 at 761.301 kb on - strand, within AO356_03420 at 761.301 kb on - strand, within AO356_03420 at 761.325 kb on - strand, within AO356_03420 at 761.325 kb on - strand, within AO356_03420 at 761.372 kb on + strand, within AO356_03420 at 761.373 kb on - strand, within AO356_03420 at 761.375 kb on + strand, within AO356_03420 at 761.376 kb on - strand, within AO356_03420 at 761.428 kb on - strand, within AO356_03420 at 761.570 kb on + strand, within AO356_03420 at 761.570 kb on + strand, within AO356_03420 at 761.605 kb on - strand, within AO356_03420 at 761.732 kb on - strand, within AO356_03420 at 761.828 kb on - strand, within AO356_03420 at 762.089 kb on + strand at 762.154 kb on + strand at 762.180 kb on - strand at 762.198 kb on - strand at 762.211 kb on + strand at 762.410 kb on + strand at 762.458 kb on + strand at 762.458 kb on + strand at 762.467 kb on + strand at 762.467 kb on + strand at 762.467 kb on + strand at 762.468 kb on - strand at 762.468 kb on - strand at 762.468 kb on - strand at 762.471 kb on + strand at 762.495 kb on + strand at 762.495 kb on + strand at 762.496 kb on - strand at 762.496 kb on - strand at 762.496 kb on - strand at 762.496 kb on - strand at 762.501 kb on - strand at 762.564 kb on - strand at 762.610 kb on + strand at 762.610 kb on + strand at 762.610 kb on + strand at 762.611 kb on - strand at 762.659 kb on + strand at 762.706 kb on - strand at 762.741 kb on + strand at 762.758 kb on - strand at 763.104 kb on + strand, within AO356_03425 at 763.123 kb on + strand, within AO356_03425 at 763.123 kb on + strand, within AO356_03425 at 763.124 kb on - strand, within AO356_03425 at 763.124 kb on - strand, within AO356_03425 at 763.125 kb on + strand, within AO356_03425 at 763.125 kb on + strand, within AO356_03425 at 763.147 kb on + strand, within AO356_03425
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose (C) remove 760,026 + AO356_03415 0.15 -0.9 760,027 - AO356_03415 0.15 -3.0 760,027 - AO356_03415 0.15 -1.9 760,027 - AO356_03415 0.15 -2.0 760,098 + AO356_03415 0.23 -1.2 760,099 - AO356_03415 0.23 -3.4 760,163 + AO356_03415 0.29 -0.8 760,163 + AO356_03415 0.29 -1.3 760,163 + AO356_03415 0.29 -1.6 760,164 - AO356_03415 0.29 -2.1 760,164 - AO356_03415 0.29 -1.0 760,164 - AO356_03415 0.29 -1.9 760,179 + AO356_03415 0.31 -2.0 760,266 + AO356_03415 0.40 -0.6 760,267 - AO356_03415 0.40 +0.1 760,267 - AO356_03415 0.40 -0.3 760,267 - AO356_03415 0.40 -2.5 760,292 + AO356_03415 0.43 -3.4 760,354 + AO356_03415 0.49 -2.0 760,354 + AO356_03415 0.49 -0.6 760,354 + AO356_03415 0.49 -2.1 760,354 + AO356_03415 0.49 -0.3 760,354 + AO356_03415 0.49 -2.0 760,354 + AO356_03415 0.49 -0.4 760,354 + AO356_03415 0.49 -1.5 760,355 - AO356_03415 0.50 -2.4 760,355 - AO356_03415 0.50 -2.8 760,355 - AO356_03415 0.50 -2.8 760,355 - AO356_03415 0.50 -2.1 760,359 + AO356_03415 0.50 -0.9 760,359 + AO356_03415 0.50 -2.0 760,359 + AO356_03415 0.50 -2.3 760,360 - AO356_03415 0.50 -1.6 760,360 - AO356_03415 0.50 -2.1 760,360 - AO356_03415 0.50 -0.5 760,360 - AO356_03415 0.50 -2.3 760,360 - AO356_03415 0.50 -2.1 760,360 - AO356_03415 0.50 -2.1 760,360 - AO356_03415 0.50 -2.7 760,378 - AO356_03415 0.52 -0.2 760,378 - AO356_03415 0.52 -1.5 760,590 + AO356_03415 0.74 -2.4 760,591 - AO356_03415 0.74 -1.7 760,591 - AO356_03415 0.74 -2.1 760,591 - AO356_03415 0.74 -2.5 760,591 - AO356_03415 0.74 -0.3 760,615 - AO356_03415 0.77 -1.5 760,615 - AO356_03415 0.77 -3.0 760,615 - AO356_03415 0.77 -0.3 760,740 + -1.3 760,757 - -0.9 760,799 - -3.0 760,799 - -0.4 760,864 - -3.1 760,886 + -0.6 760,937 + -3.0 760,937 + -1.6 760,937 + -1.8 760,938 - -0.9 760,980 - -1.3 761,136 + AO356_03420 0.22 -2.2 761,137 - AO356_03420 0.22 -3.4 761,137 - AO356_03420 0.22 -3.2 761,137 - AO356_03420 0.22 -1.8 761,143 + AO356_03420 0.22 -2.7 761,143 + AO356_03420 0.22 -0.7 761,143 + AO356_03420 0.22 -0.5 761,143 + AO356_03420 0.22 -3.6 761,143 + AO356_03420 0.22 -1.9 761,144 - AO356_03420 0.22 -2.1 761,144 - AO356_03420 0.22 -1.5 761,144 - AO356_03420 0.22 -1.8 761,156 + AO356_03420 0.23 -2.6 761,157 - AO356_03420 0.23 -2.5 761,157 - AO356_03420 0.23 -0.4 761,240 + AO356_03420 0.30 -1.0 761,241 - AO356_03420 0.30 -1.5 761,289 + AO356_03420 0.33 -4.1 761,290 - AO356_03420 0.33 -3.9 761,301 - AO356_03420 0.34 -2.9 761,301 - AO356_03420 0.34 -2.0 761,301 - AO356_03420 0.34 -2.6 761,325 - AO356_03420 0.36 -1.7 761,325 - AO356_03420 0.36 -3.4 761,372 + AO356_03420 0.40 -1.2 761,373 - AO356_03420 0.40 -2.3 761,375 + AO356_03420 0.40 -3.0 761,376 - AO356_03420 0.40 -1.8 761,428 - AO356_03420 0.44 -3.0 761,570 + AO356_03420 0.55 -3.1 761,570 + AO356_03420 0.55 -2.8 761,605 - AO356_03420 0.57 -2.0 761,732 - AO356_03420 0.67 -1.9 761,828 - AO356_03420 0.74 -1.9 762,089 + -2.0 762,154 + -2.0 762,180 - +0.2 762,198 - -1.2 762,211 + -2.5 762,410 + -1.9 762,458 + -1.6 762,458 + -1.0 762,467 + +0.6 762,467 + -0.0 762,467 + -1.1 762,468 - -0.2 762,468 - +0.2 762,468 - -0.2 762,471 + -0.3 762,495 + -1.0 762,495 + -1.1 762,496 - -1.1 762,496 - +0.7 762,496 - +0.4 762,496 - +0.1 762,501 - -0.2 762,564 - +1.0 762,610 + +0.7 762,610 + +1.2 762,610 + -0.2 762,611 - +0.5 762,659 + -0.6 762,706 - -0.1 762,741 + -0.1 762,758 - -1.5 763,104 + AO356_03425 0.30 -0.8 763,123 + AO356_03425 0.32 -0.4 763,123 + AO356_03425 0.32 +0.4 763,124 - AO356_03425 0.32 -2.0 763,124 - AO356_03425 0.32 -1.0 763,125 + AO356_03425 0.32 +0.3 763,125 + AO356_03425 0.32 -0.1 763,147 + AO356_03425 0.34 +0.4
Or see this region's nucleotide sequence