Experiment: D-Trehalose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03370 and AO356_03375 are separated by 24 nucleotides AO356_03375 and AO356_03380 are separated by 80 nucleotides AO356_03380 and AO356_03385 overlap by 1 nucleotides
AO356_03370: AO356_03370 - glycosyl transferase, at 749,982 to 751,088
_03370
AO356_03375: AO356_03375 - ExsB family protein, at 751,113 to 752,267
_03375
AO356_03380: AO356_03380 - glycosyl amidation-associated protein WbuZ, at 752,348 to 753,109
_03380
AO356_03385: AO356_03385 - imidazole glycerol phosphate synthase subunit HisH, at 753,109 to 753,717
_03385
Position (kb) 751
752
753 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 750.206 kb on + strand, within AO356_03370 at 751.315 kb on + strand, within AO356_03375 at 751.394 kb on + strand, within AO356_03375 at 751.429 kb on + strand, within AO356_03375 at 751.538 kb on + strand, within AO356_03375 at 751.894 kb on + strand, within AO356_03375 at 752.354 kb on - strand at 752.519 kb on + strand, within AO356_03380 at 752.519 kb on + strand, within AO356_03380 at 752.520 kb on - strand, within AO356_03380 at 752.521 kb on + strand, within AO356_03380 at 752.521 kb on + strand, within AO356_03380 at 752.522 kb on - strand, within AO356_03380 at 752.522 kb on - strand, within AO356_03380 at 752.555 kb on + strand, within AO356_03380 at 752.588 kb on + strand, within AO356_03380 at 752.589 kb on - strand, within AO356_03380 at 752.589 kb on - strand, within AO356_03380 at 752.858 kb on - strand, within AO356_03380 at 752.882 kb on - strand, within AO356_03380 at 752.939 kb on + strand, within AO356_03380 at 752.939 kb on + strand, within AO356_03380 at 752.963 kb on + strand, within AO356_03380 at 753.116 kb on - strand at 753.190 kb on - strand, within AO356_03385 at 753.228 kb on - strand, within AO356_03385
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose (C) remove 750,206 + AO356_03370 0.20 -0.9 751,315 + AO356_03375 0.17 -0.4 751,394 + AO356_03375 0.24 -1.1 751,429 + AO356_03375 0.27 -1.4 751,538 + AO356_03375 0.37 -2.0 751,894 + AO356_03375 0.68 +0.9 752,354 - +0.3 752,519 + AO356_03380 0.22 -2.6 752,519 + AO356_03380 0.22 +0.1 752,520 - AO356_03380 0.23 +0.1 752,521 + AO356_03380 0.23 -0.8 752,521 + AO356_03380 0.23 -1.0 752,522 - AO356_03380 0.23 +0.0 752,522 - AO356_03380 0.23 +0.1 752,555 + AO356_03380 0.27 -0.9 752,588 + AO356_03380 0.31 -2.4 752,589 - AO356_03380 0.32 +0.2 752,589 - AO356_03380 0.32 -0.3 752,858 - AO356_03380 0.67 -0.2 752,882 - AO356_03380 0.70 -0.1 752,939 + AO356_03380 0.78 -3.3 752,939 + AO356_03380 0.78 -2.0 752,963 + AO356_03380 0.81 -3.2 753,116 - +0.2 753,190 - AO356_03385 0.13 -0.4 753,228 - AO356_03385 0.20 +1.1
Or see this region's nucleotide sequence