Strain Fitness in Pantoea sp. MT58 around IAI47_15840

Experiment: Manganese (II) chloride tetrahydrate 50 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Manganese (II) chloride tetrahydrate 50 uM, anaerobic
3,343,137	-		IAI47_15830	0.85	-0.3
3,343,147	+		IAI47_15830	0.86	+2.1
3,343,151	+		IAI47_15830	0.87	+0.7
3,343,151	+		IAI47_15830	0.87	+0.2
3,343,152	-		IAI47_15830	0.87	-2.2
3,343,152	-		IAI47_15830	0.87	-0.0
3,343,152	-		IAI47_15830	0.87	+0.5
3,343,262	+				+1.6
3,343,262	+				+0.6
3,343,262	+				-0.2
3,343,263	-				+0.6
3,343,358	-		IAI47_15835	0.11	-0.0
3,343,358	-		IAI47_15835	0.11	-0.2
3,343,362	+		IAI47_15835	0.12	-0.2
3,343,362	+		IAI47_15835	0.12	-0.8
3,343,418	+		IAI47_15835	0.18	+0.5
3,343,419	-		IAI47_15835	0.18	+0.5
3,343,419	-		IAI47_15835	0.18	+0.9
3,343,494	-		IAI47_15835	0.27	+0.4
3,343,494	-		IAI47_15835	0.27	+1.1
3,343,578	+		IAI47_15835	0.37	+0.7
3,343,578	+		IAI47_15835	0.37	-0.5
3,343,578	+		IAI47_15835	0.37	-0.0
3,343,578	+		IAI47_15835	0.37	-0.6
3,343,578	+		IAI47_15835	0.37	-1.0
3,343,578	+		IAI47_15835	0.37	+0.3
3,343,579	-		IAI47_15835	0.37	-0.4
3,343,684	+		IAI47_15835	0.49	+0.6
3,343,685	+		IAI47_15835	0.50	+1.2
3,343,685	+		IAI47_15835	0.50	+2.7
3,343,685	+		IAI47_15835	0.50	+0.3
3,343,685	+		IAI47_15835	0.50	+0.9
3,343,685	+		IAI47_15835	0.50	+1.7
3,343,686	-		IAI47_15835	0.50	-1.1
3,343,686	-		IAI47_15835	0.50	-1.0
3,343,686	-		IAI47_15835	0.50	+1.0
3,343,753	+		IAI47_15835	0.58	+0.4
3,343,835	+		IAI47_15835	0.67	+0.6
3,343,835	+		IAI47_15835	0.67	-0.2
3,343,835	+		IAI47_15835	0.67	-1.2
3,343,835	+		IAI47_15835	0.67	-0.8
3,343,835	+		IAI47_15835	0.67	-0.3
3,343,835	+		IAI47_15835	0.67	+1.4
3,343,835	+		IAI47_15835	0.67	-3.4
3,343,835	+		IAI47_15835	0.67	+2.0
3,343,835	+		IAI47_15835	0.67	+1.7
3,343,835	+		IAI47_15835	0.67	+1.2
3,343,836	-		IAI47_15835	0.67	+1.1
3,343,836	-		IAI47_15835	0.67	-0.5
3,343,836	-		IAI47_15835	0.67	-0.4
3,343,836	-		IAI47_15835	0.67	+1.5
3,343,839	+		IAI47_15835	0.68	+1.0
3,343,839	+		IAI47_15835	0.68	-0.6
3,343,839	+		IAI47_15835	0.68	-0.1
3,343,839	+		IAI47_15835	0.68	+0.9
3,343,839	+		IAI47_15835	0.68	-1.4
3,343,839	+		IAI47_15835	0.68	+1.0
3,343,839	+		IAI47_15835	0.68	+2.0
3,343,839	+		IAI47_15835	0.68	-0.1
3,343,839	+		IAI47_15835	0.68	+1.3
3,343,839	+		IAI47_15835	0.68	+0.4
3,343,839	+		IAI47_15835	0.68	+0.5
3,343,839	+		IAI47_15835	0.68	+1.3
3,343,839	+		IAI47_15835	0.68	-0.1
3,343,839	+		IAI47_15835	0.68	+0.4
3,343,839	+		IAI47_15835	0.68	+0.4
3,343,839	+		IAI47_15835	0.68	-0.9
3,343,839	+		IAI47_15835	0.68	-0.3
3,343,839	+		IAI47_15835	0.68	+0.9
3,343,839	+		IAI47_15835	0.68	+1.0
3,343,839	+		IAI47_15835	0.68	+0.6
3,343,839	+		IAI47_15835	0.68	+0.2
3,343,839	+		IAI47_15835	0.68	-0.9
3,343,839	+		IAI47_15835	0.68	+1.3
3,343,839	+		IAI47_15835	0.68	-0.2
3,343,840	-		IAI47_15835	0.68	-0.1
3,343,840	-		IAI47_15835	0.68	+1.3
3,343,840	-		IAI47_15835	0.68	+0.1
3,343,840	-		IAI47_15835	0.68	+0.3
3,343,840	-		IAI47_15835	0.68	-2.9
3,343,840	-		IAI47_15835	0.68	+1.9
3,343,840	-		IAI47_15835	0.68	-0.0
3,343,840	-		IAI47_15835	0.68	-0.5
3,343,840	-		IAI47_15835	0.68	+0.2
3,343,840	-		IAI47_15835	0.68	-0.4
3,343,840	-		IAI47_15835	0.68	+2.2
3,343,840	-		IAI47_15835	0.68	+1.4
3,343,840	-		IAI47_15835	0.68	-0.1
3,343,840	-		IAI47_15835	0.68	+1.5
3,343,840	-		IAI47_15835	0.68	+1.4
3,343,840	-		IAI47_15835	0.68	-0.1
3,343,840	-		IAI47_15835	0.68	+1.1
3,343,840	-		IAI47_15835	0.68	+0.0
3,343,840	-		IAI47_15835	0.68	-0.1
3,343,840	-		IAI47_15835	0.68	-0.6
3,343,840	-		IAI47_15835	0.68	-0.3
3,343,840	-		IAI47_15835	0.68	+0.2
3,343,840	-		IAI47_15835	0.68	+0.5
3,343,840	-		IAI47_15835	0.68	+2.1
3,343,840	-		IAI47_15835	0.68	+0.6
3,343,840	-		IAI47_15835	0.68	-1.5
3,343,840	-		IAI47_15835	0.68	+0.3
3,343,840	-		IAI47_15835	0.68	-1.0
3,343,840	-		IAI47_15835	0.68	-1.5
3,343,844	+		IAI47_15835	0.68	+1.7
3,343,844	+		IAI47_15835	0.68	-0.3
3,343,845	-		IAI47_15835	0.68	+0.4
3,343,845	-		IAI47_15835	0.68	+0.9
3,343,845	-		IAI47_15835	0.68	-0.2
3,343,845	-		IAI47_15835	0.68	+0.0
3,343,909	+		IAI47_15835	0.76	-0.4
3,343,909	+		IAI47_15835	0.76	+1.2
3,343,909	+		IAI47_15835	0.76	+0.7
3,343,909	+		IAI47_15835	0.76	+0.5
3,343,909	+		IAI47_15835	0.76	+1.4
3,343,909	+		IAI47_15835	0.76	+0.7
3,343,909	+		IAI47_15835	0.76	+0.7
3,343,909	+		IAI47_15835	0.76	-0.5
3,343,909	+		IAI47_15835	0.76	-0.9
3,343,910	-		IAI47_15835	0.76	+1.0
3,343,910	-		IAI47_15835	0.76	+0.5
3,343,910	-		IAI47_15835	0.76	-0.1
3,343,910	-		IAI47_15835	0.76	-1.2
3,343,910	-		IAI47_15835	0.76	+0.7
3,343,910	-		IAI47_15835	0.76	-1.8
3,343,912	+		IAI47_15835	0.76	-0.9
3,343,913	-		IAI47_15835	0.76	-2.5
3,343,913	-		IAI47_15835	0.76	+1.1
3,343,989	+		IAI47_15835	0.85	+1.5
3,343,989	+		IAI47_15835	0.85	-0.7
3,343,990	-		IAI47_15835	0.85	+0.0
3,344,068	-				+0.9
3,344,068	-				-1.6
3,344,086	+				+1.7
3,344,087	-				+0.2
3,344,103	+				-1.2
3,344,103	+				+0.7
3,344,104	-				+0.4
3,344,104	-				-0.5
3,344,115	+				+1.2
3,344,163	+				+1.0
3,344,164	-				-0.7
3,344,164	-				-1.0
3,344,164	-				-2.3
3,344,164	-				-0.6
3,344,164	-				-1.3
3,344,166	+				+0.1
3,344,166	+				-0.5
3,344,166	+				-0.6
3,344,166	+				-2.1
3,344,166	+				+1.0
3,344,167	-				-0.2
3,344,204	+		IAI47_15840	0.13	-0.4
3,344,233	+		IAI47_15840	0.18	+0.1
3,344,233	+		IAI47_15840	0.18	-0.8
3,344,233	+		IAI47_15840	0.18	-1.4
3,344,234	-		IAI47_15840	0.18	-0.8
3,344,234	-		IAI47_15840	0.18	-1.5
3,344,234	-		IAI47_15840	0.18	+0.3
3,344,234	-		IAI47_15840	0.18	-1.6
3,344,234	-		IAI47_15840	0.18	-1.1
3,344,276	+		IAI47_15840	0.26	-1.2
3,344,277	-		IAI47_15840	0.26	+0.0
3,344,277	-		IAI47_15840	0.26	-1.5
3,344,309	-		IAI47_15840	0.32	-0.9
3,344,309	-		IAI47_15840	0.32	-0.7
3,344,310	+		IAI47_15840	0.32	+1.3
3,344,311	-		IAI47_15840	0.32	+0.6
3,344,345	+		IAI47_15840	0.39	+0.2
3,344,345	+		IAI47_15840	0.39	-1.1
3,344,346	-		IAI47_15840	0.39	-0.2
3,344,348	-		IAI47_15840	0.39	-0.1
3,344,348	-		IAI47_15840	0.39	+0.5
3,344,411	-		IAI47_15840	0.51	-0.3
3,344,411	-		IAI47_15840	0.51	-0.8
3,344,411	-		IAI47_15840	0.51	-0.4
3,344,424	+		IAI47_15840	0.53	-0.4
3,344,424	+		IAI47_15840	0.53	-2.7
3,344,424	+		IAI47_15840	0.53	-0.2
3,344,425	-		IAI47_15840	0.53	-0.2
3,344,425	-		IAI47_15840	0.53	-1.5
3,344,496	+		IAI47_15840	0.66	-0.7
3,344,496	+		IAI47_15840	0.66	-0.6
3,344,578	+		IAI47_15840	0.81	-2.0
3,344,578	+		IAI47_15840	0.81	-0.2
3,344,579	-		IAI47_15840	0.81	-0.9
3,344,683	+				+0.4
3,344,715	+				+0.7
3,344,715	+				-0.1
3,344,716	-				-3.4
3,344,716	-				+0.1
3,344,724	+				+0.9
3,344,724	+				-1.0
3,344,724	+				+0.4
3,344,725	-				+0.7
3,344,725	-				+0.3
3,344,725	-				-0.2
3,344,727	+				-1.2
3,344,745	+				-1.6
3,344,745	+				+1.0
3,344,745	+				+0.7
3,344,746	-				-3.8
3,344,746	-				-0.5
3,344,746	-				+0.3
3,344,746	-				-1.6
3,344,746	-				-0.4
3,344,746	-				+0.5
3,344,800	+				+1.1
3,344,836	+				-2.4
3,344,836	+				+0.6
3,344,836	+				-1.3
3,344,871	+				+0.8
3,344,872	-				-1.0
3,344,880	+				+1.5
3,344,880	+				-0.2
3,344,880	+				+0.9
3,344,880	+				-0.9
3,344,880	+				+2.4
3,344,880	+				+0.5
3,344,881	-				-1.1
3,344,881	-				+0.4
3,344,896	+				-1.0
3,344,972	+		IAI47_15845	0.10	+1.2
3,344,972	+		IAI47_15845	0.10	+0.0
3,344,972	+		IAI47_15845	0.10	+0.1
3,344,973	-		IAI47_15845	0.10	+1.0
3,344,973	-		IAI47_15845	0.10	-0.0
3,345,015	+		IAI47_15845	0.15	-1.4
3,345,015	+		IAI47_15845	0.15	+0.3
3,345,015	+		IAI47_15845	0.15	-0.1
3,345,015	+		IAI47_15845	0.15	+0.4
3,345,015	+		IAI47_15845	0.15	-0.8
3,345,015	+		IAI47_15845	0.15	-1.7
3,345,015	+		IAI47_15845	0.15	-0.7
3,345,016	-		IAI47_15845	0.15	-1.4
3,345,016	-		IAI47_15845	0.15	-0.2
3,345,016	-		IAI47_15845	0.15	+0.5
3,345,030	-		IAI47_15845	0.17	-0.3
3,345,030	-		IAI47_15845	0.17	+0.8
3,345,289	+		IAI47_15845	0.45	+1.5
3,345,336	+		IAI47_15845	0.51	-0.1
3,345,336	+		IAI47_15845	0.51	+2.7
3,345,337	-		IAI47_15845	0.51	+1.9
3,345,337	-		IAI47_15845	0.51	+1.3
3,345,366	+		IAI47_15845	0.54	+0.4
3,345,366	+		IAI47_15845	0.54	-0.1
3,345,366	+		IAI47_15845	0.54	+0.9
3,345,366	+		IAI47_15845	0.54	-2.2
3,345,366	+		IAI47_15845	0.54	-3.0
3,345,367	-		IAI47_15845	0.54	+2.4
3,345,370	+		IAI47_15845	0.55	+0.4
3,345,370	+		IAI47_15845	0.55	-0.2
3,345,371	-		IAI47_15845	0.55	+2.3
3,345,424	+		IAI47_15845	0.61	+0.9
3,345,425	-		IAI47_15845	0.61	-0.8
3,345,432	+		IAI47_15845	0.61	-0.2
3,345,442	+		IAI47_15845	0.63	+0.4
3,345,444	+		IAI47_15845	0.63	-1.9
3,345,444	+		IAI47_15845	0.63	-0.2
3,345,444	+		IAI47_15845	0.63	-2.2
3,345,444	+		IAI47_15845	0.63	-1.8
3,345,444	+		IAI47_15845	0.63	+1.3
3,345,444	+		IAI47_15845	0.63	+1.4
3,345,444	+		IAI47_15845	0.63	+0.1
3,345,445	-		IAI47_15845	0.63	+1.2
3,345,445	-		IAI47_15845	0.63	-1.5
3,345,445	-		IAI47_15845	0.63	-1.4
3,345,445	-		IAI47_15845	0.63	-1.7
3,345,445	-		IAI47_15845	0.63	-1.3
3,345,445	-		IAI47_15845	0.63	-1.2
3,345,445	-		IAI47_15845	0.63	+2.4
3,345,445	-		IAI47_15845	0.63	+1.1
3,345,445	-		IAI47_15845	0.63	-1.0
3,345,447	+		IAI47_15845	0.63	-1.9
3,345,447	+		IAI47_15845	0.63	-0.9
3,345,448	-		IAI47_15845	0.63	+0.7
3,345,448	-		IAI47_15845	0.63	+0.1
3,345,448	-		IAI47_15845	0.63	-3.6
3,345,448	-		IAI47_15845	0.63	-0.8
3,345,570	+		IAI47_15845	0.77	-0.5
3,345,571	-		IAI47_15845	0.77	-1.0
3,345,571	-		IAI47_15845	0.77	+0.2
3,345,586	-		IAI47_15845	0.79	-0.6