Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2479

Experiment: L-Lysine 50 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine 50 mM
2,563,599	+		Ga0059261_2478	0.47	-0.3
2,563,599	+		Ga0059261_2478	0.47	+1.8
2,563,600	-		Ga0059261_2478	0.47	+0.5
2,563,600	-		Ga0059261_2478	0.47	-0.1
2,563,600	-		Ga0059261_2478	0.47	-0.5
2,563,678	+				+0.2
2,563,678	+		Ga0059261_2478	0.58	+0.4
2,563,711	+		Ga0059261_2478	0.62	-0.8
2,563,711	+		Ga0059261_2478	0.62	+0.1
2,563,711	+		Ga0059261_2478	0.62	+0.2
2,563,711	+		Ga0059261_2478	0.62	-0.2
2,563,712	-		Ga0059261_2478	0.62	-0.9
2,563,712	-		Ga0059261_2478	0.62	-0.9
2,563,712	-		Ga0059261_2478	0.62	-1.1
2,564,076	+				-1.4
2,564,076	+				-0.2
2,564,076	+				+0.8
2,564,077	-				-0.2
2,564,077	-				+1.3
2,564,077	-				+0.8
2,564,091	-				-0.6
2,564,102	-				-0.1
2,564,102	-				+0.8
2,564,181	+				-0.1
2,564,181	+				+0.9
2,564,182	-				+0.1
2,564,182	-				+0.2
2,564,470	+		Ga0059261_2479	0.16	+0.7
2,564,470	+		Ga0059261_2479	0.16	+0.3
2,564,470	+		Ga0059261_2479	0.16	+0.3
2,564,470	+		Ga0059261_2479	0.16	-0.7
2,564,471	-		Ga0059261_2479	0.16	-1.2
2,564,471	-		Ga0059261_2479	0.16	-0.6
2,564,471	-		Ga0059261_2479	0.16	+0.3
2,564,471	-				+2.8
2,564,471	-		Ga0059261_2479	0.16	+0.6
2,564,471	-		Ga0059261_2479	0.16	-2.1
2,564,471	-		Ga0059261_2479	0.16	+1.3
2,564,472	+		Ga0059261_2479	0.16	+0.2
2,564,472	+		Ga0059261_2479	0.16	+0.4
2,564,472	+		Ga0059261_2479	0.16	-0.1
2,564,472	+				+1.4
2,564,472	+		Ga0059261_2479	0.16	-1.8
2,564,472	+		Ga0059261_2479	0.16	-1.2
2,564,473	-		Ga0059261_2479	0.16	-0.8
2,564,473	-		Ga0059261_2479	0.16	+1.9
2,564,473	-		Ga0059261_2479	0.16	+0.2
2,564,593	+		Ga0059261_2479	0.22	+0.4
2,564,593	+		Ga0059261_2479	0.22	+0.6
2,564,593	+		Ga0059261_2479	0.22	-0.6
2,564,593	+		Ga0059261_2479	0.22	+0.1
2,564,594	-		Ga0059261_2479	0.22	-0.6
2,564,653	+		Ga0059261_2479	0.24	-0.3
2,564,653	+		Ga0059261_2479	0.24	+1.2
2,564,653	+		Ga0059261_2479	0.24	+0.3
2,564,654	-		Ga0059261_2479	0.24	-0.0
2,564,654	-		Ga0059261_2479	0.24	-0.5
2,564,662	+		Ga0059261_2479	0.25	-0.1
2,564,662	+		Ga0059261_2479	0.25	+0.1
2,564,663	-		Ga0059261_2479	0.25	+1.8
2,564,663	-		Ga0059261_2479	0.25	+0.1
2,564,740	+		Ga0059261_2479	0.28	-0.3
2,564,740	+		Ga0059261_2479	0.28	-0.7
2,564,740	+		Ga0059261_2479	0.28	-2.2
2,564,740	+		Ga0059261_2479	0.28	+0.1
2,564,740	+		Ga0059261_2479	0.28	+0.1
2,564,740	+		Ga0059261_2479	0.28	-0.3
2,564,740	+		Ga0059261_2479	0.28	-0.2
2,564,740	+		Ga0059261_2479	0.28	-0.5
2,564,740	+		Ga0059261_2479	0.28	-0.0
2,564,740	+		Ga0059261_2479	0.28	+0.4
2,564,740	+		Ga0059261_2479	0.28	-0.5
2,564,741	-		Ga0059261_2479	0.28	-0.4
2,564,741	-		Ga0059261_2479	0.28	-0.3
2,564,741	-		Ga0059261_2479	0.28	-0.1
2,564,741	-		Ga0059261_2479	0.28	-0.2
2,564,741	-		Ga0059261_2479	0.28	-0.4
2,564,741	-		Ga0059261_2479	0.28	-1.0
2,564,743	-		Ga0059261_2479	0.28	+0.4
2,564,743	-		Ga0059261_2479	0.28	-0.3
2,564,877	+		Ga0059261_2479	0.35	-1.0
2,564,878	-		Ga0059261_2479	0.35	-0.6
2,564,926	+		Ga0059261_2479	0.37	+0.4
2,564,926	+		Ga0059261_2479	0.37	+0.0
2,564,926	+		Ga0059261_2479	0.37	+0.2
2,564,926	+		Ga0059261_2479	0.37	+0.6
2,564,926	+		Ga0059261_2479	0.37	-1.0
2,564,926	+		Ga0059261_2479	0.37	+0.1
2,564,927	-		Ga0059261_2479	0.37	-0.7
2,564,927	-		Ga0059261_2479	0.37	+0.4
2,564,927	-		Ga0059261_2479	0.37	-0.3
2,564,927	-		Ga0059261_2479	0.37	+0.2
2,564,927	-		Ga0059261_2479	0.37	-0.5
2,564,927	-		Ga0059261_2479	0.37	+0.5
2,564,927	-		Ga0059261_2479	0.37	-0.8
2,564,927	-		Ga0059261_2479	0.37	-0.7
2,564,927	-		Ga0059261_2479	0.37	-1.8
2,564,927	-		Ga0059261_2479	0.37	-0.2
2,564,927	-		Ga0059261_2479	0.37	+1.5
2,564,927	-		Ga0059261_2479	0.37	+1.4
2,564,959	+		Ga0059261_2479	0.38	-0.0
2,564,959	+		Ga0059261_2479	0.38	+0.0
2,564,959	+		Ga0059261_2479	0.38	-0.1
2,564,959	+		Ga0059261_2479	0.38	-0.2
2,564,959	+		Ga0059261_2479	0.38	+0.2
2,564,959	+		Ga0059261_2479	0.38	-0.0
2,564,959	+		Ga0059261_2479	0.38	+0.3
2,564,960	-		Ga0059261_2479	0.39	+0.3
2,564,960	-		Ga0059261_2479	0.39	+0.1
2,564,960	-				+0.8
2,564,960	-		Ga0059261_2479	0.39	-1.5
2,564,960	-		Ga0059261_2479	0.39	+0.8
2,564,960	-		Ga0059261_2479	0.39	-0.3
2,564,968	+		Ga0059261_2479	0.39	-0.3
2,564,968	+		Ga0059261_2479	0.39	-0.5
2,564,968	+		Ga0059261_2479	0.39	-1.2
2,564,968	+		Ga0059261_2479	0.39	-0.5
2,564,969	-		Ga0059261_2479	0.39	-0.2
2,564,969	-				+2.1
2,564,969	-		Ga0059261_2479	0.39	+3.8
2,564,969	-		Ga0059261_2479	0.39	-2.2
2,564,969	-		Ga0059261_2479	0.39	-0.5
2,565,231	+		Ga0059261_2479	0.51	+0.1
2,565,231	+		Ga0059261_2479	0.51	-0.7
2,565,232	-		Ga0059261_2479	0.51	+0.5
2,565,232	-		Ga0059261_2479	0.51	+0.2
2,565,232	-		Ga0059261_2479	0.51	-0.2
2,565,232	-		Ga0059261_2479	0.51	+0.1
2,565,232	-		Ga0059261_2479	0.51	+0.1
2,565,232	-		Ga0059261_2479	0.51	+0.1
2,565,257	-		Ga0059261_2479	0.52	+0.1
2,565,262	+		Ga0059261_2479	0.53	+0.8
2,565,262	+		Ga0059261_2479	0.53	-2.3
2,565,263	-		Ga0059261_2479	0.53	+0.3
2,565,263	-		Ga0059261_2479	0.53	-0.0
2,565,263	-		Ga0059261_2479	0.53	+1.0
2,565,263	-		Ga0059261_2479	0.53	-0.6
2,565,266	-		Ga0059261_2479	0.53	-0.2
2,565,292	+		Ga0059261_2479	0.54	+0.4
2,565,293	-		Ga0059261_2479	0.54	-0.5
2,565,293	-		Ga0059261_2479	0.54	-0.0
2,565,322	+		Ga0059261_2479	0.55	-0.0
2,565,323	-		Ga0059261_2479	0.55	-1.2
2,565,358	+		Ga0059261_2479	0.57	-0.5
2,565,358	+		Ga0059261_2479	0.57	+0.1
2,565,358	+		Ga0059261_2479	0.57	-0.8
2,565,358	+		Ga0059261_2479	0.57	+0.4
2,565,359	-		Ga0059261_2479	0.57	+0.1
2,565,359	-		Ga0059261_2479	0.57	+0.5
2,565,359	-		Ga0059261_2479	0.57	-0.3
2,565,376	+		Ga0059261_2479	0.58	-1.3
2,565,376	+		Ga0059261_2479	0.58	+0.3
2,565,376	+		Ga0059261_2479	0.58	-0.4
2,565,377	-		Ga0059261_2479	0.58	+0.2
2,565,377	-		Ga0059261_2479	0.58	-0.3
2,565,377	-		Ga0059261_2479	0.58	-0.2
2,565,399	+		Ga0059261_2479	0.59	+0.3
2,565,399	+		Ga0059261_2479	0.59	+0.3
2,565,400	-				-0.8
2,565,478	+		Ga0059261_2479	0.62	-1.2
2,565,478	+		Ga0059261_2479	0.62	-0.1
2,565,478	+		Ga0059261_2479	0.62	-0.0
2,565,478	+		Ga0059261_2479	0.62	+0.5
2,565,478	+		Ga0059261_2479	0.62	+0.1
2,565,478	+				-0.8
2,565,478	+		Ga0059261_2479	0.62	-0.3
2,565,479	-		Ga0059261_2479	0.63	-0.3
2,565,533	-		Ga0059261_2479	0.65	-0.7
2,565,697	+		Ga0059261_2479	0.73	-0.5
2,565,697	+		Ga0059261_2479	0.73	-1.4
2,565,697	+		Ga0059261_2479	0.73	+0.9
2,565,697	+		Ga0059261_2479	0.73	-0.3
2,565,697	+		Ga0059261_2479	0.73	+0.4
2,565,697	+		Ga0059261_2479	0.73	-0.4
2,565,697	+		Ga0059261_2479	0.73	-0.0
2,565,698	-		Ga0059261_2479	0.73	-0.8
2,565,698	-		Ga0059261_2479	0.73	-0.3
2,565,698	-		Ga0059261_2479	0.73	-0.4
2,565,698	-		Ga0059261_2479	0.73	-0.1
2,565,698	-		Ga0059261_2479	0.73	-0.6
2,565,698	-		Ga0059261_2479	0.73	-0.4
2,565,698	-		Ga0059261_2479	0.73	+1.2
2,565,739	+		Ga0059261_2479	0.75	+0.3
2,565,740	-		Ga0059261_2479	0.75	+0.0
2,565,805	+		Ga0059261_2479	0.78	+0.4
2,565,805	+		Ga0059261_2479	0.78	-0.7
2,565,805	+		Ga0059261_2479	0.78	+0.1
2,565,805	+		Ga0059261_2479	0.78	+0.7
2,565,805	+		Ga0059261_2479	0.78	-0.4
2,565,806	-		Ga0059261_2479	0.78	-0.7
2,565,806	-		Ga0059261_2479	0.78	-1.7
2,565,806	-		Ga0059261_2479	0.78	+0.0
2,565,806	-		Ga0059261_2479	0.78	-0.2
2,565,806	-		Ga0059261_2479	0.78	-0.3
2,565,806	-		Ga0059261_2479	0.78	-0.5
2,565,806	-		Ga0059261_2479	0.78	-2.2
2,565,892	+		Ga0059261_2479	0.82	+0.2
2,565,892	+		Ga0059261_2479	0.82	-1.3
2,565,892	+		Ga0059261_2479	0.82	-0.2
2,565,892	+		Ga0059261_2479	0.82	-0.7
2,565,892	+		Ga0059261_2479	0.82	-0.3
2,565,892	+		Ga0059261_2479	0.82	-0.5
2,565,892	+		Ga0059261_2479	0.82	+0.0
2,565,893	-		Ga0059261_2479	0.82	+0.1
2,565,893	-		Ga0059261_2479	0.82	+0.2
2,565,893	-		Ga0059261_2479	0.82	-0.5
2,565,893	-		Ga0059261_2479	0.82	+0.4
2,565,893	-		Ga0059261_2479	0.82	+0.4
2,565,893	-		Ga0059261_2479	0.82	+0.3
2,565,893	-		Ga0059261_2479	0.82	+0.1
2,565,893	-		Ga0059261_2479	0.82	-0.2
2,565,893	-		Ga0059261_2479	0.82	-0.2
2,566,058	-		Ga0059261_2479	0.89	-1.5
2,566,069	+		Ga0059261_2479	0.90	+0.3
2,566,069	+		Ga0059261_2479	0.90	-1.0
2,566,070	-				-1.5
2,566,072	+				+0.8
2,566,072	+				-1.0
2,566,072	+				+1.0
2,566,072	+				-1.8
2,566,072	+				+0.1
2,566,072	+				-0.4
2,566,072	+				-0.0
2,566,072	+				-0.1
2,566,072	+				+0.5
2,566,073	-				+1.3
2,566,073	-				-0.5
2,566,073	-				+0.0
2,566,073	-				+1.2
2,566,073	-				+1.0
2,566,073	-				-0.1
2,566,073	-				-0.5
2,566,073	-				-0.1
2,566,073	-				-0.5
2,566,073	-				-0.1
2,566,073	-				-0.1
2,566,073	-				+0.5
2,566,078	+				+0.4
2,566,078	+				-0.2
2,566,078	+				+0.3
2,566,078	+				-2.4
2,566,078	+				+0.8
2,566,078	+				-0.2
2,566,078	+				+0.6
2,566,078	+				-0.6
2,566,079	-				-0.3
2,566,079	-				+0.2
2,566,079	-				-1.3
2,566,079	-				-0.6
2,566,079	-				-0.2
2,566,079	-				+1.2
2,566,079	-				+0.5
2,566,079	-				+1.2
2,566,079	-				+0.5
2,566,079	-				+0.1
2,566,079	-				+0.7
2,566,216	+				-0.2
2,566,216	+				-0.7
2,566,216	+				-0.5
2,566,216	+				-0.2
2,566,216	+				+0.6
2,566,217	-				-0.9
2,566,217	-				-0.7
2,566,217	-				-0.5
2,566,217	-				-1.1
2,566,217	-				-0.5
2,566,217	-				+0.2
2,566,217	-				+0.2
2,566,217	-				-0.1
2,566,217	-				-0.1
2,566,217	-				-0.2
2,566,217	-				-0.7
2,566,217	-				+0.2
2,566,291	+				+0.2
2,566,291	+				-2.5
2,566,291	+				+0.1
2,566,292	-				+0.0
2,566,343	+				+0.1
2,566,343	+				+0.1
2,566,343	+				+0.6
2,566,343	+				-0.4
2,566,344	-				-1.2
2,566,344	-				-0.5
2,566,344	-				+0.1
2,566,405	+				+0.6
2,566,406	-				+0.9
2,566,406	-				-0.3
2,566,431	-				-0.0
2,566,454	+				-1.7
2,566,454	+				-0.1
2,566,455	-				-0.9
2,566,455	-				-2.8
2,566,455	-				-0.9
2,566,458	+				-1.0
2,566,458	+				-1.5
2,566,458	+				+0.7
2,566,458	+				-0.6
2,566,458	+				+0.1
2,566,458	+				-0.3
2,566,458	+				-0.5
2,566,458	+				-0.3
2,566,458	+				-2.5
2,566,458	+				+0.0
2,566,459	-				+0.1
2,566,459	-				-0.1
2,566,459	-				-0.1
2,566,459	-				-0.4
2,566,459	-				+0.0
2,566,459	-				-0.2
2,566,459	-				-0.2
2,566,459	-				-0.9
2,566,648	+				-0.3
2,566,648	+				+0.0
2,566,648	+				+0.8
2,566,648	+				+0.8
2,566,649	-				-0.2
2,566,649	-				+1.2
2,566,722	+				-0.5
2,566,723	-				+0.4
2,566,723	-				+0.4
2,566,774	+				+0.5
2,566,774	+				-0.3
2,566,774	+				-1.7
2,566,774	+				+0.6
2,566,774	+				+1.2
2,566,774	+				+0.4
2,566,774	+				+0.2
2,566,774	+				-0.3
2,566,774	+				-2.4
2,566,774	+				+0.5
2,566,774	+				-0.4
2,566,774	+				+1.5
2,566,774	+				+1.5
2,566,774	+				+0.9
2,566,774	+				+0.3
2,566,774	+				-0.5
2,566,774	+				+0.2
2,566,774	+				-0.1
2,566,775	-				+0.1
2,566,775	-				-1.5
2,566,775	-				-2.4
2,566,775	-				-0.3
2,566,775	-				-0.5
2,566,775	-				-2.9
2,566,775	-				-1.8
2,566,775	-				-1.4
2,566,775	-				-1.5
2,566,775	-				-2.9
2,566,926	-		Ga0059261_2481	0.13	-0.2
2,567,185	-		Ga0059261_2481	0.37	-0.8
2,567,185	-		Ga0059261_2481	0.37	-0.4