Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS07245 and EX31_RS07250 overlap by 4 nucleotides EX31_RS07250 and EX31_RS07255 are separated by 83 nucleotides EX31_RS07255 and EX31_RS07260 are separated by 209 nucleotides
EX31_RS07245: EX31_RS07245 - ABC transporter ATP-binding protein, at 249,085 to 249,915
_RS07245
EX31_RS07250: EX31_RS07250 - ABC transporter ATP-binding protein, at 249,912 to 250,685
_RS07250
EX31_RS07255: EX31_RS07255 - serine hydrolase, at 250,769 to 252,322
_RS07255
EX31_RS07260: EX31_RS07260 - formate-dependent uric acid utilization protein AegA, at 252,532 to 254,511
_RS07260
Position (kb) 250
251
252
253 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 249.820 kb on + strand, within EX31_RS07245 at 249.949 kb on + strand at 249.949 kb on + strand at 250.183 kb on + strand, within EX31_RS07250 at 250.183 kb on + strand, within EX31_RS07250 at 250.198 kb on - strand, within EX31_RS07250 at 250.283 kb on + strand, within EX31_RS07250 at 250.506 kb on + strand, within EX31_RS07250 at 250.506 kb on + strand, within EX31_RS07250 at 250.506 kb on + strand, within EX31_RS07250 at 250.507 kb on - strand, within EX31_RS07250 at 250.507 kb on - strand, within EX31_RS07250 at 250.507 kb on - strand, within EX31_RS07250 at 250.507 kb on - strand, within EX31_RS07250 at 250.507 kb on - strand, within EX31_RS07250 at 250.507 kb on - strand, within EX31_RS07250 at 250.508 kb on + strand, within EX31_RS07250 at 250.509 kb on - strand, within EX31_RS07250 at 250.538 kb on - strand, within EX31_RS07250 at 250.609 kb on + strand at 250.610 kb on - strand at 250.610 kb on - strand at 250.648 kb on + strand at 250.657 kb on + strand at 250.657 kb on + strand at 250.657 kb on + strand at 250.658 kb on - strand at 250.658 kb on - strand at 250.704 kb on + strand at 250.704 kb on + strand at 250.705 kb on - strand at 250.795 kb on - strand at 250.835 kb on - strand at 250.888 kb on + strand at 251.061 kb on + strand, within EX31_RS07255 at 251.649 kb on - strand, within EX31_RS07255 at 251.678 kb on - strand, within EX31_RS07255 at 251.678 kb on - strand, within EX31_RS07255 at 251.685 kb on - strand, within EX31_RS07255 at 251.787 kb on + strand, within EX31_RS07255 at 251.787 kb on + strand, within EX31_RS07255 at 251.832 kb on + strand, within EX31_RS07255 at 251.832 kb on + strand, within EX31_RS07255 at 251.832 kb on + strand, within EX31_RS07255 at 251.833 kb on - strand, within EX31_RS07255 at 251.833 kb on - strand, within EX31_RS07255 at 251.913 kb on - strand, within EX31_RS07255 at 252.159 kb on + strand, within EX31_RS07255 at 252.159 kb on + strand, within EX31_RS07255 at 252.243 kb on - strand at 252.433 kb on + strand at 252.442 kb on + strand at 252.442 kb on + strand at 252.476 kb on - strand at 252.478 kb on + strand at 252.479 kb on - strand at 252.512 kb on - strand at 252.544 kb on - strand at 252.544 kb on - strand at 252.790 kb on - strand, within EX31_RS07260 at 252.798 kb on + strand, within EX31_RS07260 at 252.799 kb on - strand, within EX31_RS07260 at 252.843 kb on - strand, within EX31_RS07260 at 252.843 kb on - strand, within EX31_RS07260 at 252.898 kb on - strand, within EX31_RS07260 at 252.898 kb on - strand, within EX31_RS07260 at 253.147 kb on - strand, within EX31_RS07260 at 253.156 kb on + strand, within EX31_RS07260 at 253.157 kb on - strand, within EX31_RS07260 at 253.157 kb on - strand, within EX31_RS07260 at 253.157 kb on - strand, within EX31_RS07260 at 253.157 kb on - strand, within EX31_RS07260 at 253.168 kb on - strand, within EX31_RS07260 at 253.168 kb on - strand, within EX31_RS07260 at 253.168 kb on - strand, within EX31_RS07260
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 249,820 + EX31_RS07245 0.88 -1.0 249,949 + -0.1 249,949 + +2.4 250,183 + EX31_RS07250 0.35 -2.2 250,183 + EX31_RS07250 0.35 +0.4 250,198 - EX31_RS07250 0.37 +1.4 250,283 + EX31_RS07250 0.48 -0.3 250,506 + EX31_RS07250 0.77 -0.8 250,506 + EX31_RS07250 0.77 -1.2 250,506 + EX31_RS07250 0.77 +0.4 250,507 - EX31_RS07250 0.77 +1.0 250,507 - EX31_RS07250 0.77 -1.2 250,507 - EX31_RS07250 0.77 +3.7 250,507 - EX31_RS07250 0.77 +1.4 250,507 - EX31_RS07250 0.77 +0.4 250,507 - EX31_RS07250 0.77 -0.6 250,508 + EX31_RS07250 0.77 +0.2 250,509 - EX31_RS07250 0.77 +0.7 250,538 - EX31_RS07250 0.81 +0.4 250,609 + +0.4 250,610 - +0.4 250,610 - -0.6 250,648 + -0.5 250,657 + +0.1 250,657 + -0.4 250,657 + +0.4 250,658 - -0.0 250,658 - +2.7 250,704 + +2.2 250,704 + +1.0 250,705 - +1.0 250,795 - +0.0 250,835 - -0.3 250,888 + -0.6 251,061 + EX31_RS07255 0.19 +0.6 251,649 - EX31_RS07255 0.57 +2.0 251,678 - EX31_RS07255 0.58 -0.2 251,678 - EX31_RS07255 0.58 -0.3 251,685 - EX31_RS07255 0.59 +0.0 251,787 + EX31_RS07255 0.66 -0.3 251,787 + EX31_RS07255 0.66 -0.6 251,832 + EX31_RS07255 0.68 -0.1 251,832 + EX31_RS07255 0.68 +0.7 251,832 + EX31_RS07255 0.68 -1.5 251,833 - EX31_RS07255 0.68 -2.9 251,833 - EX31_RS07255 0.68 +0.2 251,913 - EX31_RS07255 0.74 -1.2 252,159 + EX31_RS07255 0.89 +0.4 252,159 + EX31_RS07255 0.89 +0.4 252,243 - +0.1 252,433 + -1.6 252,442 + -0.0 252,442 + +1.0 252,476 - -3.4 252,478 + -2.6 252,479 - -0.0 252,512 - +0.4 252,544 - +0.4 252,544 - +2.0 252,790 - EX31_RS07260 0.13 +0.1 252,798 + EX31_RS07260 0.13 +1.4 252,799 - EX31_RS07260 0.13 +1.8 252,843 - EX31_RS07260 0.16 -0.9 252,843 - EX31_RS07260 0.16 -0.0 252,898 - EX31_RS07260 0.18 +0.2 252,898 - EX31_RS07260 0.18 -1.2 253,147 - EX31_RS07260 0.31 +0.4 253,156 + EX31_RS07260 0.32 +1.0 253,157 - EX31_RS07260 0.32 +1.4 253,157 - EX31_RS07260 0.32 +2.0 253,157 - EX31_RS07260 0.32 +1.1 253,157 - EX31_RS07260 0.32 +1.3 253,168 - EX31_RS07260 0.32 +2.0 253,168 - EX31_RS07260 0.32 +0.4 253,168 - EX31_RS07260 0.32 +1.1
Or see this region's nucleotide sequence