Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS07200 and EX31_RS07205 are separated by 135 nucleotides EX31_RS07205 and EX31_RS07210 are separated by 69 nucleotides
EX31_RS07200: EX31_RS07200 - FNR family transcription factor, at 237,624 to 238,379
_RS07200
EX31_RS07205: EX31_RS07205 - universal stress protein UspE, at 238,515 to 239,474
_RS07205
EX31_RS07210: EX31_RS07210 - Re/Si-specific NAD(P)(+) transhydrogenase subunit beta, at 239,544 to 240,935
_RS07210
Position (kb) 238
239
240 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 237.546 kb on + strand at 237.547 kb on - strand at 237.554 kb on + strand at 237.554 kb on + strand at 237.554 kb on + strand at 237.554 kb on + strand at 237.554 kb on + strand at 237.555 kb on - strand at 237.555 kb on - strand at 237.555 kb on - strand at 237.555 kb on - strand at 237.555 kb on - strand at 237.556 kb on + strand at 237.556 kb on + strand at 237.557 kb on - strand at 237.557 kb on - strand at 237.557 kb on - strand at 237.560 kb on + strand at 237.560 kb on + strand at 237.561 kb on - strand at 237.561 kb on - strand at 237.565 kb on - strand at 237.623 kb on + strand at 237.623 kb on + strand at 237.653 kb on + strand at 237.692 kb on + strand at 237.692 kb on + strand at 237.692 kb on + strand at 237.710 kb on + strand, within EX31_RS07200 at 237.748 kb on + strand, within EX31_RS07200 at 237.800 kb on + strand, within EX31_RS07200 at 237.826 kb on + strand, within EX31_RS07200 at 237.826 kb on + strand, within EX31_RS07200 at 237.826 kb on + strand, within EX31_RS07200 at 237.826 kb on + strand, within EX31_RS07200 at 237.826 kb on + strand, within EX31_RS07200 at 237.826 kb on + strand, within EX31_RS07200 at 237.826 kb on + strand, within EX31_RS07200 at 237.828 kb on + strand, within EX31_RS07200 at 237.828 kb on + strand, within EX31_RS07200 at 237.943 kb on + strand, within EX31_RS07200 at 237.943 kb on + strand, within EX31_RS07200 at 237.943 kb on + strand, within EX31_RS07200 at 237.980 kb on + strand, within EX31_RS07200 at 237.980 kb on + strand, within EX31_RS07200 at 237.980 kb on + strand, within EX31_RS07200 at 238.075 kb on + strand, within EX31_RS07200 at 238.075 kb on + strand, within EX31_RS07200 at 238.075 kb on + strand, within EX31_RS07200 at 238.075 kb on + strand, within EX31_RS07200 at 238.091 kb on + strand, within EX31_RS07200 at 238.091 kb on + strand, within EX31_RS07200 at 238.146 kb on + strand, within EX31_RS07200 at 238.146 kb on + strand, within EX31_RS07200 at 238.226 kb on + strand, within EX31_RS07200 at 238.226 kb on + strand, within EX31_RS07200 at 238.230 kb on + strand, within EX31_RS07200 at 238.230 kb on + strand, within EX31_RS07200 at 238.264 kb on + strand, within EX31_RS07200 at 238.300 kb on + strand, within EX31_RS07200 at 238.300 kb on + strand, within EX31_RS07200 at 238.300 kb on + strand, within EX31_RS07200 at 238.311 kb on + strand at 238.311 kb on + strand at 238.311 kb on + strand at 238.311 kb on + strand at 238.311 kb on + strand at 238.311 kb on + strand at 238.311 kb on + strand at 238.312 kb on - strand at 238.471 kb on + strand at 238.472 kb on - strand at 238.474 kb on + strand at 238.474 kb on + strand at 238.474 kb on + strand at 238.494 kb on + strand at 238.525 kb on - strand at 238.545 kb on - strand at 238.546 kb on + strand at 238.604 kb on + strand at 238.651 kb on - strand, within EX31_RS07205 at 238.749 kb on + strand, within EX31_RS07205 at 238.915 kb on + strand, within EX31_RS07205 at 238.915 kb on + strand, within EX31_RS07205 at 238.948 kb on + strand, within EX31_RS07205 at 239.161 kb on + strand, within EX31_RS07205 at 239.161 kb on + strand, within EX31_RS07205 at 239.161 kb on + strand, within EX31_RS07205 at 239.161 kb on + strand, within EX31_RS07205 at 239.161 kb on + strand, within EX31_RS07205 at 239.161 kb on + strand, within EX31_RS07205 at 239.162 kb on - strand, within EX31_RS07205 at 239.163 kb on + strand, within EX31_RS07205 at 239.163 kb on + strand, within EX31_RS07205 at 239.164 kb on - strand, within EX31_RS07205 at 239.165 kb on + strand, within EX31_RS07205 at 239.165 kb on + strand, within EX31_RS07205 at 239.166 kb on - strand, within EX31_RS07205 at 239.166 kb on - strand, within EX31_RS07205 at 239.166 kb on - strand, within EX31_RS07205 at 239.241 kb on - strand, within EX31_RS07205 at 239.241 kb on - strand, within EX31_RS07205 at 239.580 kb on - strand at 239.664 kb on - strand at 240.152 kb on + strand, within EX31_RS07210 at 240.153 kb on - strand, within EX31_RS07210 at 240.153 kb on - strand, within EX31_RS07210 at 240.161 kb on + strand, within EX31_RS07210 at 240.161 kb on + strand, within EX31_RS07210 at 240.162 kb on - strand, within EX31_RS07210 at 240.164 kb on - strand, within EX31_RS07210 at 240.164 kb on - strand, within EX31_RS07210
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 237,546 + -1.0 237,547 - +2.4 237,554 + -0.4 237,554 + -0.5 237,554 + -0.2 237,554 + +0.4 237,554 + -0.4 237,555 - +0.4 237,555 - -0.6 237,555 - +0.4 237,555 - +0.4 237,555 - +0.9 237,556 + -1.0 237,556 + +0.4 237,557 - -1.9 237,557 - +1.2 237,557 - +0.4 237,560 + +0.4 237,560 + +2.0 237,561 - +0.7 237,561 - +0.4 237,565 - +1.1 237,623 + +1.4 237,623 + +1.7 237,653 + -0.7 237,692 + -0.6 237,692 + -1.5 237,692 + +1.4 237,710 + EX31_RS07200 0.11 -0.7 237,748 + EX31_RS07200 0.16 +1.5 237,800 + EX31_RS07200 0.23 -0.4 237,826 + EX31_RS07200 0.27 +1.4 237,826 + EX31_RS07200 0.27 +0.7 237,826 + EX31_RS07200 0.27 -1.5 237,826 + EX31_RS07200 0.27 -1.6 237,826 + EX31_RS07200 0.27 -0.3 237,826 + EX31_RS07200 0.27 -1.6 237,826 + EX31_RS07200 0.27 -0.3 237,828 + EX31_RS07200 0.27 +0.7 237,828 + EX31_RS07200 0.27 -0.3 237,943 + EX31_RS07200 0.42 +1.4 237,943 + EX31_RS07200 0.42 -0.9 237,943 + EX31_RS07200 0.42 +2.4 237,980 + EX31_RS07200 0.47 -1.0 237,980 + EX31_RS07200 0.47 +0.6 237,980 + EX31_RS07200 0.47 -2.1 238,075 + EX31_RS07200 0.60 -1.2 238,075 + EX31_RS07200 0.60 +1.1 238,075 + EX31_RS07200 0.60 +0.4 238,075 + EX31_RS07200 0.60 -0.4 238,091 + EX31_RS07200 0.62 -1.4 238,091 + EX31_RS07200 0.62 +0.4 238,146 + EX31_RS07200 0.69 +0.6 238,146 + EX31_RS07200 0.69 -1.8 238,226 + EX31_RS07200 0.80 +0.8 238,226 + EX31_RS07200 0.80 -0.1 238,230 + EX31_RS07200 0.80 -0.5 238,230 + EX31_RS07200 0.80 -0.7 238,264 + EX31_RS07200 0.85 -0.0 238,300 + EX31_RS07200 0.89 -0.7 238,300 + EX31_RS07200 0.89 +0.0 238,300 + EX31_RS07200 0.89 +1.8 238,311 + -1.2 238,311 + +0.4 238,311 + +0.5 238,311 + +0.0 238,311 + -1.0 238,311 + -1.0 238,311 + +0.2 238,312 - +0.4 238,471 + -0.0 238,472 - +0.4 238,474 + -0.6 238,474 + +0.6 238,474 + +1.4 238,494 + -0.4 238,525 - -1.2 238,545 - -0.2 238,546 + +0.9 238,604 + +0.2 238,651 - EX31_RS07205 0.14 -1.2 238,749 + EX31_RS07205 0.24 +0.4 238,915 + EX31_RS07205 0.42 -1.0 238,915 + EX31_RS07205 0.42 +1.7 238,948 + EX31_RS07205 0.45 +0.1 239,161 + EX31_RS07205 0.67 -0.5 239,161 + EX31_RS07205 0.67 +0.7 239,161 + EX31_RS07205 0.67 -0.4 239,161 + EX31_RS07205 0.67 +0.4 239,161 + EX31_RS07205 0.67 -1.1 239,161 + EX31_RS07205 0.67 -1.6 239,162 - EX31_RS07205 0.67 -0.6 239,163 + EX31_RS07205 0.68 +0.1 239,163 + EX31_RS07205 0.68 +1.4 239,164 - EX31_RS07205 0.68 -0.2 239,165 + EX31_RS07205 0.68 +0.4 239,165 + EX31_RS07205 0.68 -1.0 239,166 - EX31_RS07205 0.68 -1.2 239,166 - EX31_RS07205 0.68 -0.0 239,166 - EX31_RS07205 0.68 +0.1 239,241 - EX31_RS07205 0.76 +2.0 239,241 - EX31_RS07205 0.76 -0.9 239,580 - +0.4 239,664 - +0.6 240,152 + EX31_RS07210 0.44 -2.2 240,153 - EX31_RS07210 0.44 -0.0 240,153 - EX31_RS07210 0.44 -2.2 240,161 + EX31_RS07210 0.44 +1.8 240,161 + EX31_RS07210 0.44 -0.0 240,162 - EX31_RS07210 0.44 -0.4 240,164 - EX31_RS07210 0.45 +0.9 240,164 - EX31_RS07210 0.45 -3.5
Or see this region's nucleotide sequence