Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS03600 and CA265_RS03605 are separated by 82 nucleotides CA265_RS03605 and CA265_RS03610 are separated by 109 nucleotides
CA265_RS03600: CA265_RS03600 - hypothetical protein, at 861,614 to 862,513
_RS03600
CA265_RS03605: CA265_RS03605 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase, at 862,596 to 863,198
_RS03605
CA265_RS03610: CA265_RS03610 - imidazole glycerol phosphate synthase subunit HisF, at 863,308 to 864,447
_RS03610
Position (kb) 862
863
864 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 861.603 kb on + strand at 861.607 kb on - strand at 861.886 kb on - strand, within CA265_RS03600 at 861.908 kb on + strand, within CA265_RS03600 at 861.939 kb on + strand, within CA265_RS03600 at 861.940 kb on - strand, within CA265_RS03600 at 861.940 kb on - strand, within CA265_RS03600 at 861.970 kb on + strand, within CA265_RS03600 at 862.004 kb on + strand, within CA265_RS03600 at 862.048 kb on + strand, within CA265_RS03600 at 862.049 kb on - strand, within CA265_RS03600 at 862.049 kb on - strand, within CA265_RS03600 at 862.075 kb on + strand, within CA265_RS03600 at 862.107 kb on + strand, within CA265_RS03600 at 862.214 kb on + strand, within CA265_RS03600 at 862.214 kb on + strand, within CA265_RS03600 at 862.297 kb on + strand, within CA265_RS03600 at 862.321 kb on + strand, within CA265_RS03600 at 862.322 kb on - strand, within CA265_RS03600 at 862.334 kb on + strand at 862.335 kb on - strand, within CA265_RS03600 at 862.387 kb on + strand, within CA265_RS03600 at 862.388 kb on - strand, within CA265_RS03600 at 862.391 kb on + strand, within CA265_RS03600 at 862.392 kb on - strand, within CA265_RS03600 at 862.404 kb on - strand, within CA265_RS03600 at 862.546 kb on + strand at 862.546 kb on + strand at 862.576 kb on - strand at 862.622 kb on + strand at 862.626 kb on + strand at 862.637 kb on + strand at 862.641 kb on + strand at 862.805 kb on + strand, within CA265_RS03605 at 862.807 kb on + strand, within CA265_RS03605 at 862.808 kb on - strand, within CA265_RS03605 at 862.808 kb on - strand, within CA265_RS03605 at 862.879 kb on + strand, within CA265_RS03605 at 863.052 kb on + strand, within CA265_RS03605 at 863.053 kb on - strand, within CA265_RS03605 at 863.053 kb on - strand, within CA265_RS03605 at 863.053 kb on - strand, within CA265_RS03605 at 863.110 kb on - strand, within CA265_RS03605 at 863.151 kb on + strand at 863.186 kb on + strand at 863.186 kb on + strand at 863.187 kb on - strand at 863.187 kb on - strand at 863.239 kb on + strand at 863.271 kb on + strand at 863.303 kb on - strand at 863.307 kb on - strand at 863.311 kb on + strand at 863.500 kb on - strand, within CA265_RS03610 at 863.500 kb on - strand, within CA265_RS03610 at 863.575 kb on + strand, within CA265_RS03610 at 863.684 kb on - strand, within CA265_RS03610 at 863.786 kb on - strand, within CA265_RS03610 at 863.788 kb on + strand, within CA265_RS03610 at 863.865 kb on + strand, within CA265_RS03610 at 863.866 kb on - strand at 863.907 kb on + strand, within CA265_RS03610 at 863.987 kb on - strand, within CA265_RS03610 at 864.055 kb on - strand, within CA265_RS03610 at 864.057 kb on + strand, within CA265_RS03610 at 864.168 kb on + strand, within CA265_RS03610
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 861,603 + +0.9 861,607 - -0.2 861,886 - CA265_RS03600 0.30 -0.4 861,908 + CA265_RS03600 0.33 +1.0 861,939 + CA265_RS03600 0.36 -1.2 861,940 - CA265_RS03600 0.36 -0.5 861,940 - CA265_RS03600 0.36 -1.0 861,970 + CA265_RS03600 0.40 -0.9 862,004 + CA265_RS03600 0.43 +0.5 862,048 + CA265_RS03600 0.48 -0.7 862,049 - CA265_RS03600 0.48 +0.4 862,049 - CA265_RS03600 0.48 -0.4 862,075 + CA265_RS03600 0.51 +0.2 862,107 + CA265_RS03600 0.55 +0.7 862,214 + CA265_RS03600 0.67 +0.1 862,214 + CA265_RS03600 0.67 +0.0 862,297 + CA265_RS03600 0.76 +0.6 862,321 + CA265_RS03600 0.79 -0.6 862,322 - CA265_RS03600 0.79 -0.5 862,334 + +0.2 862,335 - CA265_RS03600 0.80 -0.9 862,387 + CA265_RS03600 0.86 -0.1 862,388 - CA265_RS03600 0.86 -0.3 862,391 + CA265_RS03600 0.86 +0.1 862,392 - CA265_RS03600 0.86 -1.1 862,404 - CA265_RS03600 0.88 +0.1 862,546 + +1.3 862,546 + +0.1 862,576 - +0.1 862,622 + -3.6 862,626 + -3.7 862,637 + -3.6 862,641 + -5.0 862,805 + CA265_RS03605 0.35 -2.2 862,807 + CA265_RS03605 0.35 -5.1 862,808 - CA265_RS03605 0.35 -2.9 862,808 - CA265_RS03605 0.35 -1.8 862,879 + CA265_RS03605 0.47 -0.2 863,052 + CA265_RS03605 0.76 -1.1 863,053 - CA265_RS03605 0.76 -4.5 863,053 - CA265_RS03605 0.76 -2.3 863,053 - CA265_RS03605 0.76 -4.3 863,110 - CA265_RS03605 0.85 -0.2 863,151 + -1.7 863,186 + -2.7 863,186 + -1.8 863,187 - -0.2 863,187 - -1.8 863,239 + -5.1 863,271 + -1.9 863,303 - -1.0 863,307 - +0.5 863,311 + -2.1 863,500 - CA265_RS03610 0.17 -2.3 863,500 - CA265_RS03610 0.17 -4.9 863,575 + CA265_RS03610 0.23 -2.5 863,684 - CA265_RS03610 0.33 -1.7 863,786 - CA265_RS03610 0.42 -2.8 863,788 + CA265_RS03610 0.42 -1.8 863,865 + CA265_RS03610 0.49 -0.6 863,866 - -0.3 863,907 + CA265_RS03610 0.53 -2.1 863,987 - CA265_RS03610 0.60 -3.0 864,055 - CA265_RS03610 0.66 -3.4 864,057 + CA265_RS03610 0.66 -4.0 864,168 + CA265_RS03610 0.75 -2.0
Or see this region's nucleotide sequence