Strain Fitness in Pantoea sp. MT58 around IAI47_19165

Experiment: Manganese (II) chloride tetrahydrate 50 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Manganese (II) chloride tetrahydrate 50 uM, anaerobic
59,231	+		IAI47_19160	0.55	+1.1
59,231	+		IAI47_19160	0.55	-0.0
59,231	+		IAI47_19160	0.55	-1.6
59,231	+		IAI47_19160	0.55	-1.6
59,232	-		IAI47_19160	0.55	-0.4
59,232	-		IAI47_19160	0.55	+1.2
59,232	-		IAI47_19160	0.55	+0.1
59,232	-		IAI47_19160	0.55	-1.0
59,232	-		IAI47_19160	0.55	-0.2
59,369	+		IAI47_19160	0.63	-1.4
59,370	-		IAI47_19160	0.63	+1.0
59,400	-		IAI47_19160	0.65	-0.7
59,420	+		IAI47_19160	0.66	+2.2
59,420	+		IAI47_19160	0.66	+4.2
59,420	+		IAI47_19160	0.66	-0.3
59,420	+		IAI47_19160	0.66	-1.0
59,420	+		IAI47_19160	0.66	+0.5
59,420	+		IAI47_19160	0.66	-0.3
59,421	-		IAI47_19160	0.67	+0.7
59,421	-		IAI47_19160	0.67	+2.1
59,421	-		IAI47_19160	0.67	-0.3
59,440	+		IAI47_19160	0.68	+0.3
59,440	+		IAI47_19160	0.68	+0.7
59,440	+		IAI47_19160	0.68	-0.1
59,440	+		IAI47_19160	0.68	-0.0
59,440	+		IAI47_19160	0.68	-2.4
59,440	+		IAI47_19160	0.68	+1.0
59,440	+		IAI47_19160	0.68	+2.1
59,441	-		IAI47_19160	0.68	+0.5
59,441	-		IAI47_19160	0.68	-1.0
59,441	-		IAI47_19160	0.68	-0.4
59,450	+		IAI47_19160	0.68	-1.2
59,593	+		IAI47_19160	0.77	-0.5
59,593	+		IAI47_19160	0.77	-0.3
59,593	+		IAI47_19160	0.77	+4.6
59,594	-		IAI47_19160	0.77	+1.3
59,594	-		IAI47_19160	0.77	+0.5
59,594	-		IAI47_19160	0.77	-0.9
59,630	+		IAI47_19160	0.79	-0.3
59,630	+		IAI47_19160	0.79	+1.5
59,631	-		IAI47_19160	0.79	-0.4
59,642	+		IAI47_19160	0.80	-0.1
59,642	+		IAI47_19160	0.80	-1.2
59,643	-		IAI47_19160	0.80	-1.2
59,643	-		IAI47_19160	0.80	+1.1
59,644	+		IAI47_19160	0.80	-1.6
59,644	+		IAI47_19160	0.80	+0.6
59,644	+		IAI47_19160	0.80	-2.0
59,644	+		IAI47_19160	0.80	+2.7
59,644	+		IAI47_19160	0.80	-1.1
59,644	+		IAI47_19160	0.80	+0.3
59,644	+		IAI47_19160	0.80	-0.0
59,644	+		IAI47_19160	0.80	+0.4
59,644	+		IAI47_19160	0.80	-0.9
59,644	+		IAI47_19160	0.80	-0.3
59,644	+		IAI47_19160	0.80	-3.1
59,644	+		IAI47_19160	0.80	-1.7
59,644	+		IAI47_19160	0.80	-1.1
59,644	+		IAI47_19160	0.80	+0.2
59,644	+		IAI47_19160	0.80	+0.5
59,644	+		IAI47_19160	0.80	+1.1
59,645	-		IAI47_19160	0.80	+1.4
59,645	-		IAI47_19160	0.80	-0.2
59,645	-		IAI47_19160	0.80	+0.1
59,645	-		IAI47_19160	0.80	+1.6
59,645	-		IAI47_19160	0.80	+2.3
59,645	-		IAI47_19160	0.80	+0.1
59,645	-		IAI47_19160	0.80	+0.7
59,645	-		IAI47_19160	0.80	-0.3
59,645	-		IAI47_19160	0.80	-2.0
59,645	-		IAI47_19160	0.80	+1.0
59,645	-		IAI47_19160	0.80	-2.9
59,645	-		IAI47_19160	0.80	+1.6
59,645	-		IAI47_19160	0.80	-0.1
59,645	-		IAI47_19160	0.80	-0.3
59,645	-		IAI47_19160	0.80	+0.6
59,645	-		IAI47_19160	0.80	-2.3
59,665	+		IAI47_19160	0.81	+2.0
59,665	+		IAI47_19160	0.81	+1.3
59,665	+		IAI47_19160	0.81	+1.9
59,665	+		IAI47_19160	0.81	-3.2
59,665	+		IAI47_19160	0.81	+0.3
59,666	-		IAI47_19160	0.81	+0.3
59,666	-		IAI47_19160	0.81	-3.2
59,666	-		IAI47_19160	0.81	+0.9
59,666	-		IAI47_19160	0.81	-0.9
59,666	-		IAI47_19160	0.81	-0.3
59,666	-		IAI47_19160	0.81	+0.1
59,719	+		IAI47_19160	0.85	+0.7
59,719	+		IAI47_19160	0.85	+1.5
59,720	-		IAI47_19160	0.85	-1.3
59,720	-		IAI47_19160	0.85	-1.8
59,729	-		IAI47_19160	0.85	-2.7
59,729	-		IAI47_19160	0.85	+1.1
59,753	+		IAI47_19160	0.87	+0.1
59,753	+		IAI47_19160	0.87	-1.9
59,753	+		IAI47_19160	0.87	-0.9
59,753	+		IAI47_19160	0.87	+0.3
59,754	-		IAI47_19160	0.87	-0.5
59,754	-		IAI47_19160	0.87	+1.9
59,756	+		IAI47_19160	0.87	+1.2
59,757	-		IAI47_19160	0.87	+1.4
59,757	-		IAI47_19160	0.87	+1.6
59,757	-		IAI47_19160	0.87	+0.3
59,757	-		IAI47_19160	0.87	-0.4
59,757	-		IAI47_19160	0.87	-0.2
59,757	-		IAI47_19160	0.87	+0.8
59,757	-		IAI47_19160	0.87	-0.6
59,757	-		IAI47_19160	0.87	-2.0
59,896	+				-2.8
59,896	+				-1.0
59,896	+				+3.3
59,896	+				+1.7
59,896	+				+0.6
59,897	-				-2.2
59,897	-				-0.6
59,897	-				-0.7
59,897	-				-0.3
59,897	-				+0.4
59,897	-				+1.2
59,909	-				+0.1
59,943	-				-0.1
59,960	+				+0.6
59,960	+				-0.3
59,960	+				+0.4
59,961	-				-0.3
59,970	+				-0.8
59,971	-				+0.7
59,971	-				+2.5
59,971	-				+0.8
60,023	+				-0.0
60,024	-				+1.8
60,024	-				-3.1
60,056	+				-3.2
60,056	+				-1.1
60,057	-				+0.9
60,057	-				+1.4
60,057	-				+2.0
60,103	+				+0.9
60,103	+				+0.2
60,103	+				-0.1
60,103	+				+1.4
60,103	+				-1.5
60,103	+				-1.2
60,103	+				-0.2
60,103	+				+1.3
60,103	+				-0.7
60,103	+				+1.6
60,103	+				+1.5
60,103	+				+1.7
60,104	-				+1.2
60,104	-				-3.6
60,104	-				+0.8
60,104	-				+0.9
60,104	-				+0.6
60,104	-				+0.6
60,104	-				-2.8
60,104	-				-0.1
60,104	-				-1.8
60,105	+				-2.0
60,105	+				+0.4
60,105	+				-1.4
60,105	+				-0.9
60,105	+				+1.1
60,105	+				+0.4
60,105	+				-3.6
60,105	+				-1.9
60,105	+				-0.6
60,105	+				-3.0
60,105	+				-1.2
60,105	+				+3.0
60,105	+				+0.1
60,105	+				-1.8
60,106	-				-1.0
60,106	-				+1.5
60,106	-				+1.1
60,106	-				+1.0
60,106	-				-0.3
60,106	-				+2.7
60,106	-				-0.8
60,106	-				+0.3
60,106	-				+0.4
60,106	-				+0.1
60,106	-				+2.8
60,106	-				+0.6
60,106	-				-1.1
60,114	+				-0.9
60,114	+				-0.1
60,115	-				+0.3
60,115	-				-0.3
60,115	-				-1.3
60,115	-				+0.4
60,115	-				-0.2
60,125	+				+0.6
60,126	-				-3.1
60,126	-				-1.0
60,128	+				-0.9
60,128	+				+4.2
60,128	+				-1.2
60,128	+				+1.2
60,128	+				+0.8
60,128	+				-1.6
60,129	-				+0.2
60,129	-				+0.6
60,129	-				+0.5
60,129	-				-0.4
60,132	-				+0.1
60,164	+				+1.2
60,165	-				+1.9
60,165	-				+0.0
60,165	-				+0.9
60,165	-				-2.3
60,175	-				+0.0
60,175	-				+0.4
60,226	-		IAI47_19165	0.11	-1.5
60,238	-		IAI47_19165	0.13	-1.2
60,241	+		IAI47_19165	0.14	+1.5
60,241	+		IAI47_19165	0.14	+2.4
60,241	+		IAI47_19165	0.14	+0.5
60,242	-		IAI47_19165	0.14	-1.2
60,242	-		IAI47_19165	0.14	+1.0
60,242	-		IAI47_19165	0.14	+0.0
60,242	-		IAI47_19165	0.14	-0.7
60,242	-		IAI47_19165	0.14	+1.4
60,242	-		IAI47_19165	0.14	-0.1
60,278	+		IAI47_19165	0.19	-0.1
60,279	-		IAI47_19165	0.20	+0.0
60,279	-		IAI47_19165	0.20	+1.4
60,287	+		IAI47_19165	0.21	+1.5
60,287	+		IAI47_19165	0.21	+0.9
60,287	+		IAI47_19165	0.21	+0.6
60,287	+		IAI47_19165	0.21	+0.3
60,288	-		IAI47_19165	0.21	+0.7
60,288	-		IAI47_19165	0.21	+2.2
60,288	-		IAI47_19165	0.21	+0.2
60,288	-		IAI47_19165	0.21	+0.9
60,291	+		IAI47_19165	0.22	+1.7
60,291	+		IAI47_19165	0.22	-0.1
60,291	+		IAI47_19165	0.22	+1.7
60,291	+		IAI47_19165	0.22	-0.1
60,291	+		IAI47_19165	0.22	-0.5
60,292	-		IAI47_19165	0.22	+1.5
60,292	-		IAI47_19165	0.22	+1.6
60,292	-		IAI47_19165	0.22	+0.8
60,292	-		IAI47_19165	0.22	-0.0
60,354	+		IAI47_19165	0.31	+0.3
60,358	+		IAI47_19165	0.32	+0.8
60,358	+		IAI47_19165	0.32	+1.1
60,358	+		IAI47_19165	0.32	-3.2
60,359	-		IAI47_19165	0.32	+0.8
60,359	-		IAI47_19165	0.32	-1.9
60,359	-		IAI47_19165	0.32	+0.8
60,359	-		IAI47_19165	0.32	-0.4
60,359	-		IAI47_19165	0.32	+0.2
60,359	-		IAI47_19165	0.32	+0.7
60,359	-		IAI47_19165	0.32	-1.6
60,360	+		IAI47_19165	0.32	+0.2
60,360	+		IAI47_19165	0.32	-0.5
60,361	-		IAI47_19165	0.33	-0.9
60,361	-		IAI47_19165	0.33	-3.0
60,361	-		IAI47_19165	0.33	-2.8
60,362	+		IAI47_19165	0.33	-0.2
60,362	+		IAI47_19165	0.33	+0.9
60,363	-		IAI47_19165	0.33	+0.2
60,420	+		IAI47_19165	0.42	+1.0
60,420	+		IAI47_19165	0.42	+1.6
60,420	+		IAI47_19165	0.42	-1.4
60,420	+		IAI47_19165	0.42	+0.7
60,421	-		IAI47_19165	0.42	+0.7
60,421	-		IAI47_19165	0.42	-0.2
60,470	-		IAI47_19165	0.50	+0.4
60,491	+		IAI47_19165	0.53	-1.2
60,491	+		IAI47_19165	0.53	+1.0
60,491	+		IAI47_19165	0.53	+1.4
60,491	+		IAI47_19165	0.53	+0.9
60,492	-		IAI47_19165	0.53	-0.4
60,492	-		IAI47_19165	0.53	-0.5
60,492	-		IAI47_19165	0.53	-1.5
60,492	-		IAI47_19165	0.53	+1.0
60,492	-		IAI47_19165	0.53	+0.8
60,492	-		IAI47_19165	0.53	+1.3
60,492	-		IAI47_19165	0.53	-2.9
60,494	+		IAI47_19165	0.53	-0.2
60,494	+		IAI47_19165	0.53	+0.7
60,494	+		IAI47_19165	0.53	-1.7
60,494	+		IAI47_19165	0.53	-0.8
60,495	-		IAI47_19165	0.54	-2.1
60,495	-		IAI47_19165	0.54	-0.3
60,495	-		IAI47_19165	0.54	-1.5
60,576	+		IAI47_19165	0.66	-1.2
60,576	+		IAI47_19165	0.66	-0.8
60,577	-		IAI47_19165	0.67	-1.6
60,582	+		IAI47_19165	0.67	+0.1
60,582	+		IAI47_19165	0.67	+0.8
60,589	+		IAI47_19165	0.68	-0.3
60,590	-		IAI47_19165	0.69	+1.9
60,590	-		IAI47_19165	0.69	-0.1
60,590	-		IAI47_19165	0.69	+0.6
60,592	+		IAI47_19165	0.69	+3.3
60,592	+		IAI47_19165	0.69	+0.8
60,592	+		IAI47_19165	0.69	-1.1
60,593	-		IAI47_19165	0.69	-1.0
60,593	-		IAI47_19165	0.69	+0.3
60,621	+		IAI47_19165	0.73	-1.5
60,621	+		IAI47_19165	0.73	+1.1
60,628	+		IAI47_19165	0.75	-0.8
60,628	+		IAI47_19165	0.75	-0.5
60,628	+		IAI47_19165	0.75	-0.3
60,629	-		IAI47_19165	0.75	-1.5
60,636	+		IAI47_19165	0.76	-1.4
60,636	+		IAI47_19165	0.76	-1.7
60,636	+		IAI47_19165	0.76	-0.3
60,636	+		IAI47_19165	0.76	-0.2
60,636	+		IAI47_19165	0.76	-1.5
60,637	-		IAI47_19165	0.76	+1.2
60,637	-		IAI47_19165	0.76	+1.1
60,637	-		IAI47_19165	0.76	-0.3
60,665	+		IAI47_19165	0.80	+0.4
60,665	+		IAI47_19165	0.80	+1.9
60,682	+		IAI47_19165	0.83	-0.1
60,684	+		IAI47_19165	0.83	+0.1
60,684	+		IAI47_19165	0.83	-0.1
60,684	+		IAI47_19165	0.83	-0.4
60,685	-		IAI47_19165	0.83	-0.4
60,685	-		IAI47_19165	0.83	+2.0
60,685	-		IAI47_19165	0.83	-2.1
60,685	-		IAI47_19165	0.83	+0.6
60,685	-		IAI47_19165	0.83	-0.7
60,712	+		IAI47_19165	0.88	+1.1
60,713	-		IAI47_19165	0.88	+1.8
60,758	+				+1.3
60,758	+				+0.2
60,758	+				+2.0
60,758	+				+0.5
60,759	-				+0.8
60,773	+				+0.3
60,774	-				+1.5
60,774	-				-1.4
60,774	-				+0.2
60,783	+				-0.3
60,784	-				+0.5
60,786	-				+0.8
60,786	-				+0.9
60,786	-				-1.2
60,792	+				+0.3
60,792	+				-0.5
60,793	-				+1.6
60,797	-				-1.3
60,797	-				+0.5
60,797	-				+1.1
60,812	-				-0.9
60,819	+				-1.4
60,819	+				-2.0
60,828	+				+0.7
60,828	+				+0.9
60,829	-				-2.1
60,829	-				-2.9
60,831	-				+0.3
60,880	-				+0.1
60,912	-				-0.0
60,917	+				+0.6
60,918	-				+0.6
60,918	-				+1.2
60,922	+				+0.3
60,922	+				-0.1
60,922	+				-0.0
60,923	-				+1.8
60,930	+				+0.3
60,930	+				-1.1
60,931	-				+1.3
60,931	-				+0.0
60,977	+				+0.2
60,978	-				+0.3
60,985	-				+0.6
60,985	-				+0.3
60,985	-				+1.4
61,003	+				+0.9
61,003	+				+0.5
61,004	-				+0.7
61,004	-				-2.9
61,017	+				-1.7
61,018	-				+1.2
61,020	+				+0.2
61,038	+				+1.2
61,038	+				+1.4
61,039	-				-0.8
61,039	-				+1.7
61,044	+				+0.8
61,044	+				+0.7
61,045	-				+1.3
61,045	-				-0.1
61,087	+				+1.0
61,094	+				+0.7
61,094	+				+1.3
61,094	+				+0.2
61,094	+				-0.5
61,094	+				+0.9
61,094	+				-0.0
61,094	+				+0.6
61,094	+				+1.2
61,095	-				-2.4
61,095	-				-1.2
61,095	-				+0.1
61,095	-				-1.6
61,095	-				-1.6
61,139	+		IAI47_19170	0.11	-0.2
61,140	-		IAI47_19170	0.11	+0.7
61,164	+		IAI47_19170	0.13	+2.0
61,164	+		IAI47_19170	0.13	+1.4
61,170	+		IAI47_19170	0.14	-0.9
61,170	+		IAI47_19170	0.14	+1.9
61,171	-		IAI47_19170	0.14	+0.2
61,219	-		IAI47_19170	0.18	-1.9
61,233	+		IAI47_19170	0.19	+2.4
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