Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3240

Experiment: L-Lysine 25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine 25 mM
3,372,893	+				-0.1
3,372,893	+				+0.4
3,372,893	+				-0.3
3,372,893	+				+0.6
3,372,893	+				+0.5
3,372,893	+				-0.5
3,372,894	-				+1.0
3,372,894	-				-0.0
3,372,894	-				-0.1
3,372,894	-				-0.6
3,372,894	-				+0.0
3,372,894	-				+0.8
3,372,894	-				+0.9
3,373,029	+		Ga0059261_3239	0.20	+1.0
3,373,030	-		Ga0059261_3239	0.20	+0.2
3,373,030	-		Ga0059261_3239	0.20	-1.2
3,373,226	-		Ga0059261_3239	0.40	-0.6
3,373,226	-		Ga0059261_3239	0.40	+0.2
3,373,320	+		Ga0059261_3239	0.49	-0.1
3,373,320	+		Ga0059261_3239	0.49	+0.2
3,373,320	+		Ga0059261_3239	0.49	+0.2
3,373,321	-		Ga0059261_3239	0.49	-1.5
3,373,321	-		Ga0059261_3239	0.49	+0.8
3,373,321	-		Ga0059261_3239	0.49	-0.1
3,373,321	-		Ga0059261_3239	0.49	-1.4
3,373,321	-		Ga0059261_3239	0.49	-0.2
3,373,338	+		Ga0059261_3239	0.51	+0.2
3,373,339	-		Ga0059261_3239	0.51	-0.3
3,373,339	-		Ga0059261_3239	0.51	-0.5
3,373,371	+		Ga0059261_3239	0.54	-1.0
3,373,371	+		Ga0059261_3239	0.54	-0.6
3,373,371	+		Ga0059261_3239	0.54	-0.3
3,373,371	+		Ga0059261_3239	0.54	+0.2
3,373,371	+		Ga0059261_3239	0.54	+1.2
3,373,372	-		Ga0059261_3239	0.54	+0.2
3,373,372	-		Ga0059261_3239	0.54	+0.6
3,373,372	-		Ga0059261_3239	0.54	+0.1
3,373,372	-		Ga0059261_3239	0.54	-0.1
3,373,372	-		Ga0059261_3239	0.54	+1.4
3,373,413	+		Ga0059261_3239	0.58	+0.2
3,373,413	+		Ga0059261_3239	0.58	+0.1
3,373,413	+		Ga0059261_3239	0.58	+0.6
3,373,413	+		Ga0059261_3239	0.58	-0.1
3,373,414	-		Ga0059261_3239	0.58	+0.7
3,373,414	-		Ga0059261_3239	0.58	-1.6
3,373,414	-		Ga0059261_3239	0.58	+0.1
3,373,479	+		Ga0059261_3239	0.65	-0.2
3,373,479	+		Ga0059261_3239	0.65	-0.3
3,373,479	+		Ga0059261_3239	0.65	+0.1
3,373,479	+		Ga0059261_3239	0.65	+0.8
3,373,479	+		Ga0059261_3239	0.65	+0.2
3,373,479	+		Ga0059261_3239	0.65	+0.3
3,373,480	-		Ga0059261_3239	0.65	+0.1
3,373,480	-		Ga0059261_3239	0.65	+0.5
3,373,480	-		Ga0059261_3239	0.65	+0.1
3,373,480	-		Ga0059261_3239	0.65	+0.4
3,373,480	-		Ga0059261_3239	0.65	-0.4
3,373,480	-		Ga0059261_3239	0.65	+0.7
3,373,480	-		Ga0059261_3239	0.65	+0.1
3,373,485	+		Ga0059261_3239	0.66	-0.1
3,373,485	+		Ga0059261_3239	0.66	+0.4
3,373,485	+		Ga0059261_3239	0.66	-0.6
3,373,485	+		Ga0059261_3239	0.66	+0.1
3,373,485	+		Ga0059261_3239	0.66	-0.2
3,373,485	+		Ga0059261_3239	0.66	+0.6
3,373,485	+		Ga0059261_3239	0.66	-0.2
3,373,486	-		Ga0059261_3239	0.66	+0.3
3,373,486	-		Ga0059261_3239	0.66	+0.0
3,373,486	-		Ga0059261_3239	0.66	+0.2
3,373,486	-		Ga0059261_3239	0.66	+0.7
3,373,486	-		Ga0059261_3239	0.66	-0.2
3,373,486	-		Ga0059261_3239	0.66	+0.4
3,373,486	-		Ga0059261_3239	0.66	+0.2
3,373,486	-		Ga0059261_3239	0.66	-0.2
3,373,486	-		Ga0059261_3239	0.66	-0.1
3,373,486	-		Ga0059261_3239	0.66	+0.1
3,373,486	-		Ga0059261_3239	0.66	-0.0
3,373,486	-		Ga0059261_3239	0.66	+0.3
3,373,553	+		Ga0059261_3239	0.72	-0.3
3,373,553	+		Ga0059261_3239	0.72	+1.2
3,373,554	-		Ga0059261_3239	0.72	-0.1
3,373,582	+		Ga0059261_3239	0.75	+0.5
3,373,725	+		Ga0059261_3239	0.90	+0.5
3,373,725	+		Ga0059261_3239	0.90	-0.3
3,373,725	+		Ga0059261_3239	0.90	+0.2
3,373,725	+		Ga0059261_3239	0.90	+0.2
3,373,725	+		Ga0059261_3239	0.90	+0.3
3,373,725	+		Ga0059261_3239	0.90	-0.5
3,373,725	+		Ga0059261_3239	0.90	+0.2
3,373,726	-		Ga0059261_3239	0.90	+0.3
3,373,726	-		Ga0059261_3239	0.90	+0.3
3,373,726	-		Ga0059261_3239	0.90	-1.5
3,373,726	-		Ga0059261_3239	0.90	+0.5
3,373,726	-		Ga0059261_3239	0.90	+0.4
3,373,726	-		Ga0059261_3239	0.90	-1.2
3,373,726	-		Ga0059261_3239	0.90	+0.8
3,373,726	-		Ga0059261_3239	0.90	+0.5
3,373,779	+				+0.1
3,373,779	+				-0.2
3,373,779	+				-0.5
3,373,780	-				+0.4
3,373,780	-				+1.1
3,373,780	-				+0.7
3,373,780	-				-0.1
3,373,945	+		Ga0059261_3240	0.11	-0.3
3,373,945	+				+0.8
3,373,946	-		Ga0059261_3240	0.12	+0.7
3,373,946	-		Ga0059261_3240	0.12	-0.3
3,373,946	-		Ga0059261_3240	0.12	+0.4
3,373,946	-		Ga0059261_3240	0.12	+0.8
3,373,946	-		Ga0059261_3240	0.12	+0.2
3,373,946	-		Ga0059261_3240	0.12	-0.1
3,374,005	+		Ga0059261_3240	0.18	+0.0
3,374,005	+		Ga0059261_3240	0.18	-0.3
3,374,006	-		Ga0059261_3240	0.18	+0.7
3,374,220	-		Ga0059261_3240	0.40	+0.8
3,374,519	-		Ga0059261_3240	0.70	+0.9
3,374,519	-		Ga0059261_3240	0.70	+0.2
3,374,818	+				-0.2
3,374,818	+				-0.2
3,374,819	-				-0.6
3,374,819	-				+0.7
3,374,863	-				-0.4
3,374,863	-				+0.2
3,374,983	-				-0.3
3,374,983	-				+0.2
3,375,096	+		Ga0059261_3241	0.18	+0.1
3,375,096	+		Ga0059261_3241	0.18	-0.7
3,375,096	+		Ga0059261_3241	0.18	+0.7
3,375,096	+		Ga0059261_3241	0.18	-0.1
3,375,096	+				-0.2
3,375,097	-		Ga0059261_3241	0.18	-0.4
3,375,097	-		Ga0059261_3241	0.18	-0.2
3,375,097	-		Ga0059261_3241	0.18	+0.0
3,375,108	+		Ga0059261_3241	0.19	+1.4
3,375,108	+		Ga0059261_3241	0.19	-1.8
3,375,108	+		Ga0059261_3241	0.19	+0.4
3,375,109	-		Ga0059261_3241	0.19	-0.0
3,375,109	-		Ga0059261_3241	0.19	+0.0
3,375,109	-		Ga0059261_3241	0.19	+0.6
3,375,318	+		Ga0059261_3241	0.35	+0.5
3,375,319	-		Ga0059261_3241	0.36	+0.1
3,375,319	-		Ga0059261_3241	0.36	+0.1
3,375,506	-		Ga0059261_3241	0.50	+0.2
3,375,810	+		Ga0059261_3241	0.74	+0.0
3,375,810	+		Ga0059261_3241	0.74	+0.3
3,375,810	+		Ga0059261_3241	0.74	+0.0
3,375,810	+		Ga0059261_3241	0.74	-1.0
3,375,810	+		Ga0059261_3241	0.74	+0.1
3,375,810	+		Ga0059261_3241	0.74	+0.3
3,375,810	+		Ga0059261_3241	0.74	-0.8
3,375,810	+		Ga0059261_3241	0.74	+0.5