Strain Fitness in Rahnella sp. WP5 around EX31_RS16250

Experiment: NLDM_metabolites (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_metabolites (C)
1,111	+				-0.9
1,111	+				-2.0
1,134	+				-0.9
1,135	-				+0.7
1,135	-				-1.9
1,135	-				-2.2
1,135	-				-1.7
1,254	+				+0.1
1,254	+				+0.8
1,255	-				+1.1
1,255	-				+2.7
1,277	+				-1.4
1,277	+				+0.8
1,330	-				+1.5
1,333	+				-2.0
1,333	+				+0.2
1,333	+				-1.2
1,333	+				+0.8
1,333	+				-1.7
1,333	+				+0.5
1,333	+				+3.5
1,334	-				-0.6
1,334	-				+1.7
1,334	-				+0.3
1,334	-				-1.2
1,334	-				+0.4
1,334	-				-0.3
1,362	+				-2.4
1,362	+				-0.1
1,362	+				+1.7
1,363	-				-0.9
1,363	-				-0.4
1,363	-				+1.1
1,367	+				-1.4
1,367	+				+0.1
1,368	-				-2.6
1,423	-				+0.0
1,461	+				-1.7
1,537	-				+2.6
1,560	+				-0.9
1,560	+				+2.5
1,560	+				-0.4
1,560	+				+0.7
1,560	+				+0.2
1,560	+				+1.3
1,560	+				+1.2
1,560	+				+3.1
1,560	+				-1.3
1,560	+				-1.7
1,560	+				-0.2
1,560	+				+0.7
1,561	-				+2.9
1,561	-				+0.1
1,561	-				-1.2
1,561	-				-0.4
1,561	-				+2.3
1,561	-				-2.6
1,561	-				+1.8
1,561	-				-0.2
1,561	-				-1.0
1,561	-				-1.7
1,580	+				+1.1
1,580	+				-2.9
1,580	+				-2.9
1,580	+				-1.4
1,581	-				+1.6
1,581	-				-1.2
1,581	-				+1.5
1,581	-				+3.9
1,581	-				+1.0
1,581	-				-0.4
1,581	-				+0.1
1,581	-				-1.4
1,581	-				+1.1
1,596	+		EX31_RS16240	0.14	+0.7
1,596	+		EX31_RS16240	0.14	-2.0
1,596	+		EX31_RS16240	0.14	-0.6
1,692	+		EX31_RS16240	0.54	+1.1
1,692	+		EX31_RS16240	0.54	+1.5
1,692	+		EX31_RS16240	0.54	-2.0
1,692	+		EX31_RS16240	0.54	-0.4
1,693	-		EX31_RS16240	0.54	+0.1
1,693	-		EX31_RS16240	0.54	+1.7
1,693	-		EX31_RS16240	0.54	+2.0
1,759	+		EX31_RS16240	0.81	+0.9
1,759	+		EX31_RS16240	0.81	+0.6
1,759	+		EX31_RS16240	0.81	-2.0
1,759	+		EX31_RS16240	0.81	+1.5
1,760	-		EX31_RS16240	0.82	-1.4
1,760	-		EX31_RS16240	0.82	-1.4
1,760	-		EX31_RS16240	0.82	+2.6
1,801	+				+0.4
1,801	+				-1.9
1,801	+				+1.6
1,801	+				+1.7
1,801	+				+2.3
1,801	+				-1.2
1,801	+				+2.0
1,801	+				-2.2
1,802	-				+1.8
1,802	-				-1.2
1,802	-				+0.9
1,811	+				-1.4
1,811	+				-0.3
1,811	+				+1.1
1,811	+				-0.8
1,811	+				-2.7
1,811	+				-1.4
1,811	+				-1.4
1,811	+				+1.3
1,812	-				-2.4
1,812	-				-0.4
1,812	-				-1.4
1,812	-				-1.7
1,844	+		EX31_RS16245	0.12	+0.6
1,845	-		EX31_RS16245	0.13	+1.7
1,867	+		EX31_RS16245	0.20	-0.0
1,931	-		EX31_RS16245	0.41	+0.1
1,980	+		EX31_RS16245	0.57	+1.1
1,980	+		EX31_RS16245	0.57	-2.3
1,980	+		EX31_RS16245	0.57	-0.4
1,980	+		EX31_RS16245	0.57	-3.3
1,980	+		EX31_RS16245	0.57	+2.1
1,980	+		EX31_RS16245	0.57	+2.1
1,980	+		EX31_RS16245	0.57	+0.0
1,980	+		EX31_RS16245	0.57	+2.2
1,980	+		EX31_RS16245	0.57	-1.9
1,981	-		EX31_RS16245	0.57	+2.4
1,981	-		EX31_RS16245	0.57	+1.1
1,981	-		EX31_RS16245	0.57	+1.3
1,981	-		EX31_RS16245	0.57	-2.2
1,981	-		EX31_RS16245	0.57	+0.1
1,981	-		EX31_RS16245	0.57	-2.4
1,981	-		EX31_RS16245	0.57	+1.0
2,052	+		EX31_RS16245	0.80	+1.1
2,053	-		EX31_RS16245	0.81	+0.4
2,053	-		EX31_RS16245	0.81	-0.9
2,053	-		EX31_RS16245	0.81	+1.7
2,066	+		EX31_RS16245	0.85	+1.1
2,066	+		EX31_RS16245	0.85	-1.2
2,066	+		EX31_RS16245	0.85	+2.0
2,066	+		EX31_RS16245	0.85	+0.5
2,066	+		EX31_RS16245	0.85	+1.1
2,066	+		EX31_RS16245	0.85	-0.2
2,067	-		EX31_RS16245	0.85	-2.9
2,067	-		EX31_RS16245	0.85	+1.3
2,070	+		EX31_RS16245	0.86	-3.0
2,070	+		EX31_RS16245	0.86	-2.2
2,070	+		EX31_RS16245	0.86	-0.4
2,070	+		EX31_RS16245	0.86	-2.8
2,070	+		EX31_RS16245	0.86	+1.2
2,070	+		EX31_RS16245	0.86	-0.4
2,071	-		EX31_RS16245	0.87	+0.4
2,071	-		EX31_RS16245	0.87	+0.0
2,071	-		EX31_RS16245	0.87	+1.1
2,071	-		EX31_RS16245	0.87	-2.4
2,071	-		EX31_RS16245	0.87	+3.5
2,071	-		EX31_RS16245	0.87	-1.2
2,071	-		EX31_RS16245	0.87	-0.4
2,153	+				+4.6
2,153	+				-2.2
2,153	+				-1.4
2,153	+				+0.1
2,153	+				+3.9
2,154	-		EX31_RS16250	0.10	+1.8
2,154	-		EX31_RS16250	0.10	+1.1
2,154	-		EX31_RS16250	0.10	+1.1
2,156	+		EX31_RS16250	0.10	+0.9
2,303	-		EX31_RS16250	0.42	+5.5
2,337	-		EX31_RS16250	0.50	-1.9
2,351	+		EX31_RS16250	0.53	-1.9
2,351	+		EX31_RS16250	0.53	+0.9
2,351	+		EX31_RS16250	0.53	-2.3
2,351	+		EX31_RS16250	0.53	+0.1
2,351	+		EX31_RS16250	0.53	+0.7
2,352	-		EX31_RS16250	0.53	+1.1
2,352	-		EX31_RS16250	0.53	-2.4
2,352	-		EX31_RS16250	0.53	-2.3
2,355	+		EX31_RS16250	0.54	-2.2
2,355	+		EX31_RS16250	0.54	+1.9
2,355	+		EX31_RS16250	0.54	+1.6
2,355	+		EX31_RS16250	0.54	+2.5
2,355	+		EX31_RS16250	0.54	+1.8
2,356	-		EX31_RS16250	0.54	-1.2
2,356	-		EX31_RS16250	0.54	+2.7
2,356	-		EX31_RS16250	0.54	+2.7
2,356	-		EX31_RS16250	0.54	+1.8
2,382	+		EX31_RS16250	0.60	-2.7
2,383	-		EX31_RS16250	0.60	-2.3
2,383	-		EX31_RS16250	0.60	+1.9
2,403	-		EX31_RS16250	0.64	+1.1
2,417	+		EX31_RS16250	0.67	+2.7
2,417	+		EX31_RS16250	0.67	+0.1
2,417	+		EX31_RS16250	0.67	-2.9
2,521	+				+0.1
2,522	-				+1.1
2,523	+				-0.4
2,523	+				-0.7
2,523	+				+3.8
2,524	-				-1.4
2,524	-				+0.8
2,565	-				+0.1
2,565	-				-2.0
2,580	+				-1.7
2,596	-				-0.4
2,611	+				+1.8
2,627	-				+2.0
2,681	+				-1.7
2,681	+				-0.7
2,681	+				-2.0
2,782	+		EX31_RS16255	0.41	+1.4
2,782	+		EX31_RS16255	0.41	+1.7
2,782	+		EX31_RS16255	0.41	+2.5
2,782	+		EX31_RS16255	0.41	-2.3
2,782	+		EX31_RS16255	0.41	+2.5
2,782	+		EX31_RS16255	0.41	+0.9
2,783	-		EX31_RS16255	0.41	-2.3
2,783	-		EX31_RS16255	0.41	-0.4
2,830	+		EX31_RS16255	0.57	-0.1
2,830	+		EX31_RS16255	0.57	+1.1
2,830	+		EX31_RS16255	0.57	+2.1
2,831	-		EX31_RS16255	0.57	+0.1
2,840	+		EX31_RS16255	0.60	-1.2
2,840	+		EX31_RS16255	0.60	+1.6
2,840	+		EX31_RS16255	0.60	-1.4
2,840	+		EX31_RS16255	0.60	+2.5
2,840	+		EX31_RS16255	0.60	-2.0
2,840	+		EX31_RS16255	0.60	-0.2
2,840	+		EX31_RS16255	0.60	+1.5
2,840	+		EX31_RS16255	0.60	+0.7
2,840	+		EX31_RS16255	0.60	+0.1
2,840	+		EX31_RS16255	0.60	-1.4
2,840	+		EX31_RS16255	0.60	+0.8
2,840	+		EX31_RS16255	0.60	-1.7
2,840	+		EX31_RS16255	0.60	-2.0
2,840	+		EX31_RS16255	0.60	+2.4
2,840	+		EX31_RS16255	0.60	-0.1
2,840	+		EX31_RS16255	0.60	+2.2
2,840	+		EX31_RS16255	0.60	-0.9
2,840	+		EX31_RS16255	0.60	-0.9
2,841	-		EX31_RS16255	0.61	-1.4
2,841	-		EX31_RS16255	0.61	-0.1
2,841	-		EX31_RS16255	0.61	+1.1
2,841	-		EX31_RS16255	0.61	+3.5
2,842	+		EX31_RS16255	0.61	+1.6
2,842	+		EX31_RS16255	0.61	+0.1
2,851	+		EX31_RS16255	0.64	-2.3
2,851	+		EX31_RS16255	0.64	-0.4
2,851	+		EX31_RS16255	0.64	-1.7
2,851	+		EX31_RS16255	0.64	-0.6
2,851	+		EX31_RS16255	0.64	+0.3
2,851	+		EX31_RS16255	0.64	+2.8
2,851	+		EX31_RS16255	0.64	+0.1
2,851	+		EX31_RS16255	0.64	+1.6
2,852	-		EX31_RS16255	0.65	-0.4
2,852	-		EX31_RS16255	0.65	+0.8
2,852	-		EX31_RS16255	0.65	+2.6
2,868	+		EX31_RS16255	0.70	+0.6
2,868	+		EX31_RS16255	0.70	+0.4
2,868	+		EX31_RS16255	0.70	-0.3
2,868	+		EX31_RS16255	0.70	+0.1
2,868	+		EX31_RS16255	0.70	-0.9
2,868	+		EX31_RS16255	0.70	-0.6
2,868	+		EX31_RS16255	0.70	-1.4
2,868	+		EX31_RS16255	0.70	-0.4
2,898	+		EX31_RS16255	0.80	+2.6
2,898	+		EX31_RS16255	0.80	+1.1
2,898	+		EX31_RS16255	0.80	-3.8
2,898	+		EX31_RS16255	0.80	+2.1
2,898	+		EX31_RS16255	0.80	+2.4
2,898	+		EX31_RS16255	0.80	-0.9
2,898	+		EX31_RS16255	0.80	+0.4
2,898	+		EX31_RS16255	0.80	-0.9
2,898	+		EX31_RS16255	0.80	-2.3
2,898	+		EX31_RS16255	0.80	-1.9
2,898	+		EX31_RS16255	0.80	+3.3
2,898	+		EX31_RS16255	0.80	-1.2
2,898	+		EX31_RS16255	0.80	+1.1
2,898	+		EX31_RS16255	0.80	+3.1
2,898	+		EX31_RS16255	0.80	-2.0
2,898	+		EX31_RS16255	0.80	-2.2
2,898	+		EX31_RS16255	0.80	-0.5
2,898	+		EX31_RS16255	0.80	-0.4
2,898	+		EX31_RS16255	0.80	+0.1
2,898	+		EX31_RS16255	0.80	-2.2
2,898	+		EX31_RS16255	0.80	-2.3
2,898	+		EX31_RS16255	0.80	+2.4
2,898	+		EX31_RS16255	0.80	+1.4
2,898	+		EX31_RS16255	0.80	-1.4
2,898	+		EX31_RS16255	0.80	+0.1
2,898	+		EX31_RS16255	0.80	-0.4
2,898	+		EX31_RS16255	0.80	+0.1
2,898	+		EX31_RS16255	0.80	+0.3
2,898	+		EX31_RS16255	0.80	+2.1
2,898	+		EX31_RS16255	0.80	+3.5
2,898	+		EX31_RS16255	0.80	-1.0
2,898	+		EX31_RS16255	0.80	-0.4
2,898	+		EX31_RS16255	0.80	-2.0
2,899	-		EX31_RS16255	0.80	+0.9
2,899	-		EX31_RS16255	0.80	-1.7
2,899	-		EX31_RS16255	0.80	+1.1
2,899	-		EX31_RS16255	0.80	+1.1
2,899	-		EX31_RS16255	0.80	+2.7
2,899	-		EX31_RS16255	0.80	-1.4
2,899	-		EX31_RS16255	0.80	+3.7
2,899	-		EX31_RS16255	0.80	+2.7
2,900	+		EX31_RS16255	0.81	+0.8
2,900	+		EX31_RS16255	0.81	-2.0
2,900	+		EX31_RS16255	0.81	-0.4
2,900	+		EX31_RS16255	0.81	+1.5
2,900	+		EX31_RS16255	0.81	-0.3
2,900	+		EX31_RS16255	0.81	-2.0
2,901	-		EX31_RS16255	0.81	-0.9
2,904	+		EX31_RS16255	0.82	+2.6
2,904	+		EX31_RS16255	0.82	+1.7
2,905	-		EX31_RS16255	0.82	-1.7
2,910	+		EX31_RS16255	0.84	+1.6
2,954	+				+2.1
2,954	+				+1.1
2,954	+				+0.7
2,954	+				+2.3
2,954	+				-2.2
2,954	+				+1.8
2,954	+				-0.5
2,954	+				-1.0
2,954	+				+0.5
2,954	+				+1.7
2,954	+				-1.0
2,955	-				-1.9
2,958	-				-0.4
3,015	+		EX31_RS16260	0.14	-1.2
3,015	+		EX31_RS16260	0.14	-1.9
3,016	-		EX31_RS16260	0.14	+0.1
3,104	+		EX31_RS16260	0.36	+1.2
3,104	+		EX31_RS16260	0.36	-2.0
3,104	+		EX31_RS16260	0.36	-3.3
3,104	+		EX31_RS16260	0.36	-2.9
3,111	+		EX31_RS16260	0.38	+2.0
3,111	+		EX31_RS16260	0.38	+1.1
3,111	+		EX31_RS16260	0.38	+1.3
3,111	+		EX31_RS16260	0.38	-2.3
3,111	+		EX31_RS16260	0.38	+0.4
3,111	+		EX31_RS16260	0.38	+0.7
3,111	+		EX31_RS16260	0.38	+1.0
3,111	+		EX31_RS16260	0.38	+0.4
3,111	+		EX31_RS16260	0.38	-0.1
3,111	+		EX31_RS16260	0.38	-0.7
3,111	+		EX31_RS16260	0.38	-1.8
3,111	+		EX31_RS16260	0.38	-0.9
3,111	+		EX31_RS16260	0.38	+1.1
3,111	+		EX31_RS16260	0.38	-0.3
3,111	+		EX31_RS16260	0.38	+0.0
3,111	+		EX31_RS16260	0.38	+0.8
3,111	+		EX31_RS16260	0.38	+0.0
3,112	-		EX31_RS16260	0.38	-0.9
3,125	+		EX31_RS16260	0.42	+1.4
3,125	+		EX31_RS16260	0.42	+0.4
3,171	+		EX31_RS16260	0.53	+0.5
3,171	+		EX31_RS16260	0.53	-0.6
3,171	+		EX31_RS16260	0.53	+0.0
3,171	+		EX31_RS16260	0.53	-3.7
3,171	+		EX31_RS16260	0.53	-2.2
3,171	+		EX31_RS16260	0.53	+1.1
3,171	+		EX31_RS16260	0.53	-0.9
3,171	+		EX31_RS16260	0.53	-2.0
3,172	-		EX31_RS16260	0.53	-0.1
3,188	+		EX31_RS16260	0.57	+1.1
3,188	+		EX31_RS16260	0.57	-2.6
3,269	+		EX31_RS16260	0.77	-0.4
3,310	+		EX31_RS16260	0.88	+1.3
3,331	+				-1.8
3,331	+				-0.9
3,357	+				-0.4
3,357	+				+0.9
3,357	+				+0.3
3,357	+				+0.5
3,357	+				+1.0
3,357	+				+1.9
3,357	+				+0.3
3,357	+				-1.0
3,357	+				+1.1
3,357	+				+0.9
3,357	+				-2.3
3,358	-				+2.7
3,358	-				+0.7
3,358	-				-1.2
3,358	-				+1.5
3,358	-				-1.4
3,358	-				+2.9
3,358	-				+2.1
3,358	-				+0.6
3,358	-				+0.3
3,358	-				-2.0
3,358	-				-2.2
3,358	-				+0.3
3,358	-				-2.3
3,469	+				+1.1
3,469	+				+2.3
3,469	+				+1.1
3,470	-				-1.9
3,470	-				+0.1
3,470	-				+0.9
3,470	-				-0.9
3,525	+				+2.1
3,525	+				-1.7
3,525	+				-0.2
3,526	-				+1.1