Experiment: NLDM_metabolites (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS09260 and EX31_RS09265 are separated by 30 nucleotides EX31_RS09265 and EX31_RS09270 overlap by 1 nucleotides
EX31_RS09260: EX31_RS09260 - ABC transporter ATP-binding protein, at 50,795 to 52,663
_RS09260
EX31_RS09265: EX31_RS09265 - L-Ala-D/L-Glu epimerase, at 52,694 to 53,659
_RS09265
EX31_RS09270: EX31_RS09270 - DUF1611 domain-containing protein, at 53,659 to 54,669
_RS09270
Position (kb) 52
53
54 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 51.718 kb on - strand, within EX31_RS09260 at 51.718 kb on - strand, within EX31_RS09260 at 51.718 kb on - strand, within EX31_RS09260 at 51.718 kb on - strand, within EX31_RS09260 at 51.811 kb on + strand, within EX31_RS09260 at 51.897 kb on + strand, within EX31_RS09260 at 51.897 kb on + strand, within EX31_RS09260 at 51.898 kb on - strand, within EX31_RS09260 at 51.960 kb on + strand, within EX31_RS09260 at 51.961 kb on - strand, within EX31_RS09260 at 52.031 kb on - strand, within EX31_RS09260 at 52.201 kb on + strand, within EX31_RS09260 at 52.202 kb on - strand, within EX31_RS09260 at 52.226 kb on - strand, within EX31_RS09260 at 52.683 kb on - strand at 52.925 kb on - strand, within EX31_RS09265 at 52.939 kb on - strand, within EX31_RS09265 at 53.318 kb on - strand, within EX31_RS09265 at 53.467 kb on + strand, within EX31_RS09265 at 53.467 kb on + strand, within EX31_RS09265 at 53.468 kb on - strand, within EX31_RS09265 at 53.562 kb on + strand, within EX31_RS09265 at 53.570 kb on + strand at 53.570 kb on + strand at 53.571 kb on - strand at 53.571 kb on - strand at 53.794 kb on - strand, within EX31_RS09270 at 53.904 kb on + strand, within EX31_RS09270 at 53.938 kb on + strand, within EX31_RS09270 at 53.938 kb on + strand, within EX31_RS09270 at 53.939 kb on - strand, within EX31_RS09270 at 53.939 kb on - strand, within EX31_RS09270 at 53.996 kb on + strand, within EX31_RS09270 at 54.204 kb on - strand, within EX31_RS09270 at 54.321 kb on + strand, within EX31_RS09270 at 54.648 kb on - strand at 54.648 kb on - strand at 54.648 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLDM_metabolites (C) remove 51,718 - EX31_RS09260 0.49 +3.0 51,718 - EX31_RS09260 0.49 +0.2 51,718 - EX31_RS09260 0.49 +0.8 51,718 - EX31_RS09260 0.49 -2.6 51,811 + EX31_RS09260 0.54 -0.8 51,897 + EX31_RS09260 0.59 +2.0 51,897 + EX31_RS09260 0.59 +0.2 51,898 - EX31_RS09260 0.59 -1.2 51,960 + EX31_RS09260 0.62 +0.6 51,961 - EX31_RS09260 0.62 -0.8 52,031 - EX31_RS09260 0.66 +2.2 52,201 + EX31_RS09260 0.75 -1.6 52,202 - EX31_RS09260 0.75 -1.2 52,226 - EX31_RS09260 0.77 +1.2 52,683 - +1.4 52,925 - EX31_RS09265 0.24 +0.0 52,939 - EX31_RS09265 0.25 -0.4 53,318 - EX31_RS09265 0.65 -2.5 53,467 + EX31_RS09265 0.80 +0.2 53,467 + EX31_RS09265 0.80 +0.2 53,468 - EX31_RS09265 0.80 +0.2 53,562 + EX31_RS09265 0.90 +0.2 53,570 + -1.0 53,570 + -0.8 53,571 - +0.2 53,571 - +2.7 53,794 - EX31_RS09270 0.13 +0.7 53,904 + EX31_RS09270 0.24 -1.6 53,938 + EX31_RS09270 0.28 -1.6 53,938 + EX31_RS09270 0.28 -1.4 53,939 - EX31_RS09270 0.28 +3.7 53,939 - EX31_RS09270 0.28 -0.6 53,996 + EX31_RS09270 0.33 +1.2 54,204 - EX31_RS09270 0.54 +2.0 54,321 + EX31_RS09270 0.65 +1.2 54,648 - -0.4 54,648 - -2.0 54,648 - -0.4
Or see this region's nucleotide sequence