Strain Fitness in Rahnella sp. WP5 around EX31_RS08145

Experiment: NLDM_metabolites (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_metabolites (C)
119,617	-		EX31_RS08140	0.46	+3.5
119,642	-		EX31_RS08140	0.48	+0.6
119,738	-		EX31_RS08140	0.55	+0.3
119,964	-		EX31_RS08140	0.70	+1.6
120,059	+		EX31_RS08140	0.77	+0.1
120,060	-		EX31_RS08140	0.77	+0.6
120,060	-		EX31_RS08140	0.77	+0.6
120,061	+		EX31_RS08140	0.77	+1.6
120,062	-		EX31_RS08140	0.77	+2.6
120,062	-		EX31_RS08140	0.77	-0.7
120,062	-		EX31_RS08140	0.77	+1.0
120,330	-				+0.6
120,330	-				+0.6
120,405	+				+3.5
120,406	-				-2.7
120,406	-				+0.8
120,406	-				+1.8
120,423	+				+0.1
120,424	-				-1.3
120,424	-				+0.6
120,424	-				-1.0
120,424	-				+1.0
120,424	-				-0.4
120,424	-				+1.9
120,440	+				-1.2
120,441	-				-3.3
120,441	-				+0.8
120,597	+				+0.6
120,597	+				+1.0
120,598	-				+1.0
120,598	-				-0.3
120,598	-				+0.9
120,598	-				+0.1
120,598	-				-0.3
120,598	-				+2.2
120,598	-				-2.4
120,598	-				+1.2
120,598	-				-0.7
120,598	-				+0.1
120,598	-				+1.7
120,673	+				-1.8
120,674	-				-2.4
120,726	+				-1.9
120,727	-				-1.4
120,727	-				+0.3
120,741	+				+0.1
120,797	-		EX31_RS08145	0.11	+0.3
120,813	+		EX31_RS08145	0.12	-0.0
120,813	+		EX31_RS08145	0.12	+0.8
120,813	+		EX31_RS08145	0.12	-1.2
120,813	+		EX31_RS08145	0.12	-0.7
120,813	+		EX31_RS08145	0.12	-1.8
120,814	-		EX31_RS08145	0.12	-1.2
120,814	-		EX31_RS08145	0.12	+0.7
120,814	-		EX31_RS08145	0.12	+0.2
120,845	-		EX31_RS08145	0.13	+0.9
120,898	+		EX31_RS08145	0.15	+1.2
120,928	-		EX31_RS08145	0.16	-0.1
120,988	-		EX31_RS08145	0.18	+1.9
121,062	+		EX31_RS08145	0.21	+2.0
121,082	-		EX31_RS08145	0.21	-1.1
121,082	-		EX31_RS08145	0.21	+1.1
121,094	+		EX31_RS08145	0.22	+1.1
121,095	-		EX31_RS08145	0.22	-3.2
121,302	+		EX31_RS08145	0.29	-0.5
121,307	+		EX31_RS08145	0.29	+0.2
121,308	-		EX31_RS08145	0.29	-2.4
121,308	-		EX31_RS08145	0.29	+2.0
121,365	+		EX31_RS08145	0.31	+0.6
121,365	+		EX31_RS08145	0.31	+0.4
121,366	-		EX31_RS08145	0.31	-1.7
121,366	-		EX31_RS08145	0.31	-0.0
121,370	+		EX31_RS08145	0.32	+2.4
121,370	+		EX31_RS08145	0.32	-0.1
121,370	+		EX31_RS08145	0.32	-1.7
121,370	+		EX31_RS08145	0.32	-1.7
121,371	-		EX31_RS08145	0.32	-0.6
121,371	-		EX31_RS08145	0.32	-0.4
121,371	-		EX31_RS08145	0.32	+0.6
121,371	-		EX31_RS08145	0.32	+1.7
121,447	+		EX31_RS08145	0.34	-0.2
121,448	-		EX31_RS08145	0.34	+1.3
121,457	+		EX31_RS08145	0.35	-2.6
121,527	+		EX31_RS08145	0.37	-2.5
121,551	+		EX31_RS08145	0.38	-1.4
121,587	-		EX31_RS08145	0.39	+0.8
121,587	-		EX31_RS08145	0.39	-2.3
121,643	+		EX31_RS08145	0.41	+1.0
121,665	+		EX31_RS08145	0.42	-0.2
121,684	+		EX31_RS08145	0.43	+0.3
121,686	+		EX31_RS08145	0.43	-0.2
121,686	+		EX31_RS08145	0.43	+1.8
121,686	+		EX31_RS08145	0.43	-0.4
121,686	+		EX31_RS08145	0.43	-0.7
121,686	+		EX31_RS08145	0.43	+0.3
121,686	+		EX31_RS08145	0.43	+0.6
121,686	+		EX31_RS08145	0.43	-1.7
121,686	+		EX31_RS08145	0.43	+2.3
121,686	+		EX31_RS08145	0.43	+1.9
121,686	+		EX31_RS08145	0.43	+0.6
121,686	+		EX31_RS08145	0.43	-0.5
121,686	+		EX31_RS08145	0.43	-0.1
121,686	+		EX31_RS08145	0.43	-1.8
121,686	+		EX31_RS08145	0.43	+0.9
121,686	+		EX31_RS08145	0.43	-1.7
121,686	+		EX31_RS08145	0.43	+1.3
121,686	+		EX31_RS08145	0.43	+1.1
121,686	+		EX31_RS08145	0.43	-1.8
121,687	-		EX31_RS08145	0.43	+1.1
121,687	-		EX31_RS08145	0.43	+0.1
121,687	-		EX31_RS08145	0.43	+0.8
121,687	-		EX31_RS08145	0.43	-2.7
121,687	-		EX31_RS08145	0.43	+0.6
121,687	-		EX31_RS08145	0.43	-2.4
121,687	-		EX31_RS08145	0.43	-1.2
121,687	-		EX31_RS08145	0.43	+2.2
121,687	-		EX31_RS08145	0.43	-2.4
121,687	-		EX31_RS08145	0.43	-2.4
121,687	-		EX31_RS08145	0.43	+0.8
121,693	+		EX31_RS08145	0.43	-0.5
121,693	+		EX31_RS08145	0.43	-2.1
121,693	+		EX31_RS08145	0.43	+0.6
121,693	+		EX31_RS08145	0.43	+0.6
121,693	+		EX31_RS08145	0.43	+3.0
121,694	-		EX31_RS08145	0.43	+0.8
121,694	-		EX31_RS08145	0.43	-0.0
121,705	+		EX31_RS08145	0.43	+0.1
121,705	+		EX31_RS08145	0.43	-0.4
121,755	+		EX31_RS08145	0.45	+1.1
121,755	+		EX31_RS08145	0.45	+1.6
121,755	+		EX31_RS08145	0.45	+0.6
121,760	-		EX31_RS08145	0.45	+1.7
121,760	-		EX31_RS08145	0.45	-3.7
121,760	-		EX31_RS08145	0.45	+1.4
121,760	-		EX31_RS08145	0.45	-2.2
121,760	-		EX31_RS08145	0.45	+0.8
121,760	-		EX31_RS08145	0.45	-0.4
121,835	+		EX31_RS08145	0.48	+0.8
121,835	+		EX31_RS08145	0.48	-2.1
121,835	+		EX31_RS08145	0.48	+0.6
121,835	+		EX31_RS08145	0.48	+1.4
121,836	-		EX31_RS08145	0.48	-1.5
121,836	-		EX31_RS08145	0.48	+3.0
121,836	-		EX31_RS08145	0.48	-1.7
121,836	-		EX31_RS08145	0.48	-0.4
121,836	-		EX31_RS08145	0.48	-2.2
121,836	-		EX31_RS08145	0.48	+1.0
121,836	-		EX31_RS08145	0.48	-0.0
121,864	-		EX31_RS08145	0.49	-1.2
121,865	+		EX31_RS08145	0.49	-1.9
121,865	+		EX31_RS08145	0.49	-0.5
121,866	-		EX31_RS08145	0.49	+0.3
121,944	-		EX31_RS08145	0.52	-2.4
122,076	+		EX31_RS08145	0.56	+0.4
122,077	-		EX31_RS08145	0.57	-1.4
122,077	-		EX31_RS08145	0.57	-1.5
122,077	-		EX31_RS08145	0.57	+0.1
122,077	-		EX31_RS08145	0.57	-1.9
122,147	+		EX31_RS08145	0.59	+2.6
122,187	+		EX31_RS08145	0.60	+0.6
122,187	+		EX31_RS08145	0.60	+0.3
122,187	+		EX31_RS08145	0.60	-1.5
122,188	-		EX31_RS08145	0.60	-1.7
122,188	-		EX31_RS08145	0.60	+0.8
122,195	-		EX31_RS08145	0.61	+0.5
122,207	+		EX31_RS08145	0.61	+1.6
122,312	+		EX31_RS08145	0.65	-0.1
122,313	-		EX31_RS08145	0.65	-2.4
122,313	-		EX31_RS08145	0.65	+0.6
122,323	+		EX31_RS08145	0.65	+0.4
122,323	+		EX31_RS08145	0.65	-1.2
122,324	-		EX31_RS08145	0.65	-2.7
122,416	+		EX31_RS08145	0.68	+0.9
122,448	+		EX31_RS08145	0.70	+1.1
122,449	-		EX31_RS08145	0.70	+1.0
122,541	+		EX31_RS08145	0.73	+1.5
122,542	-		EX31_RS08145	0.73	+1.6
122,572	-		EX31_RS08145	0.74	+0.6
122,574	+		EX31_RS08145	0.74	-0.6
122,574	+		EX31_RS08145	0.74	-0.9
122,575	-		EX31_RS08145	0.74	-1.7
122,575	-		EX31_RS08145	0.74	-1.2
122,575	-		EX31_RS08145	0.74	+0.1
122,575	-		EX31_RS08145	0.74	-1.1
122,651	+		EX31_RS08145	0.77	-2.5
122,652	-		EX31_RS08145	0.77	-2.1
122,652	-		EX31_RS08145	0.77	-1.0
122,652	-		EX31_RS08145	0.77	-0.2
122,652	-		EX31_RS08145	0.77	+0.7
122,652	-		EX31_RS08145	0.77	-1.5
122,652	-		EX31_RS08145	0.77	-0.4
122,652	-		EX31_RS08145	0.77	+1.4
122,878	+		EX31_RS08145	0.85	-1.5
122,905	-		EX31_RS08145	0.86	-3.3
123,020	-		EX31_RS08145	0.90	-0.4
123,038	+				-3.4
123,038	+				-2.5
123,038	+				+0.3
123,038	+				+1.6
123,039	-				+0.5
123,103	-				+1.2
123,183	-				-0.2
123,357	+				+0.1
123,357	+				+0.3
123,357	+				+1.6
123,358	-				+0.9
123,369	-				-0.6
123,487	-				+0.9
123,488	+				-1.9
123,489	-				+0.1
123,489	-				-3.9
123,489	-				+1.6
123,489	-				-2.3
123,489	-				-2.7
123,538	-		EX31_RS08150	0.13	-0.5
123,538	-		EX31_RS08150	0.13	+0.1
123,538	-		EX31_RS08150	0.13	+0.3
123,538	-		EX31_RS08150	0.13	+1.6
123,538	-		EX31_RS08150	0.13	+0.5
123,538	-		EX31_RS08150	0.13	+0.7
123,696	+		EX31_RS08150	0.25	-2.9
123,696	+		EX31_RS08150	0.25	-1.5
123,696	+		EX31_RS08150	0.25	+1.6
123,696	+		EX31_RS08150	0.25	-0.4
123,697	-		EX31_RS08150	0.25	-0.9
123,697	-		EX31_RS08150	0.25	-0.3
123,697	-		EX31_RS08150	0.25	+1.8
123,697	-		EX31_RS08150	0.25	-1.7
123,756	-		EX31_RS08150	0.30	+1.4
123,822	+		EX31_RS08150	0.35	+1.2
123,822	+		EX31_RS08150	0.35	+0.6
123,823	-		EX31_RS08150	0.35	-2.2
123,826	+		EX31_RS08150	0.35	-1.4
123,826	+		EX31_RS08150	0.35	+1.2
123,827	-		EX31_RS08150	0.35	-1.2
123,827	-		EX31_RS08150	0.35	-1.2
123,827	-		EX31_RS08150	0.35	-0.2
123,827	-		EX31_RS08150	0.35	+0.4
123,827	-		EX31_RS08150	0.35	+0.5
123,827	-		EX31_RS08150	0.35	+0.4
123,827	-		EX31_RS08150	0.35	+0.9
123,831	+		EX31_RS08150	0.35	+0.1
123,831	+		EX31_RS08150	0.35	-1.2
123,831	+		EX31_RS08150	0.35	-0.0
123,831	+		EX31_RS08150	0.35	-2.4
123,832	-		EX31_RS08150	0.36	+2.0
123,832	-		EX31_RS08150	0.36	+0.1
123,832	-		EX31_RS08150	0.36	-0.7
123,853	-		EX31_RS08150	0.37	-1.9
123,910	+		EX31_RS08150	0.42	-1.5
123,911	-		EX31_RS08150	0.42	-1.1
123,911	-		EX31_RS08150	0.42	+0.7
123,962	+		EX31_RS08150	0.45	-0.7
123,963	-		EX31_RS08150	0.46	-1.4
123,963	-		EX31_RS08150	0.46	+1.3
123,963	-		EX31_RS08150	0.46	-0.5
123,963	-		EX31_RS08150	0.46	+2.4
124,002	+		EX31_RS08150	0.49	-2.7
124,002	+		EX31_RS08150	0.49	-1.2
124,002	+		EX31_RS08150	0.49	+1.8
124,003	-		EX31_RS08150	0.49	+0.5
124,003	-		EX31_RS08150	0.49	+1.1
124,003	-		EX31_RS08150	0.49	+0.1
124,017	+		EX31_RS08150	0.50	-1.8
124,017	+		EX31_RS08150	0.50	-2.3
124,018	-		EX31_RS08150	0.50	-1.7
124,018	-		EX31_RS08150	0.50	-1.7
124,035	+		EX31_RS08150	0.51	+1.3
124,177	-		EX31_RS08150	0.62	-1.4
124,250	-		EX31_RS08150	0.68	+0.7
124,250	-		EX31_RS08150	0.68	+0.3