Strain Fitness in Rahnella sp. WP5 around EX31_RS03300

Experiment: NLDM_metabolites (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_metabolites (C)
149,451	+				+0.4
149,466	+				+1.0
149,466	+				+0.8
149,467	-				+1.0
149,539	+				-2.5
149,609	+				+1.7
149,609	+				-0.3
149,610	-				-2.7
149,634	-		EX31_RS03295	0.11	-0.1
149,693	-		EX31_RS03295	0.19	+1.1
149,693	-		EX31_RS03295	0.19	-1.6
149,693	-		EX31_RS03295	0.19	+0.4
149,693	-		EX31_RS03295	0.19	+3.6
149,712	-		EX31_RS03295	0.21	-1.4
149,771	-		EX31_RS03295	0.29	-1.4
149,877	+		EX31_RS03295	0.43	+1.7
149,993	-		EX31_RS03295	0.58	-2.0
150,044	+		EX31_RS03295	0.64	-0.6
150,120	-		EX31_RS03295	0.74	-0.1
150,135	-		EX31_RS03295	0.76	+0.8
150,145	+		EX31_RS03295	0.78	+0.4
150,145	+		EX31_RS03295	0.78	-0.9
150,145	+		EX31_RS03295	0.78	-2.3
150,146	-		EX31_RS03295	0.78	-1.9
150,146	-		EX31_RS03295	0.78	-1.9
150,146	-		EX31_RS03295	0.78	+1.0
150,146	-		EX31_RS03295	0.78	+0.8
150,206	-		EX31_RS03295	0.85	+0.8
150,206	-		EX31_RS03295	0.85	+1.8
150,206	-		EX31_RS03295	0.85	-0.6
150,208	-		EX31_RS03295	0.86	+2.1
150,208	-		EX31_RS03295	0.86	+1.8
150,208	-		EX31_RS03295	0.86	+0.5
150,208	-		EX31_RS03295	0.86	-2.8
150,285	-				-1.2
150,285	-				-0.3
150,285	-				+0.4
150,285	-				+0.3
150,305	-				+0.5
150,305	-				+1.7
150,318	+				+1.4
150,319	-				-2.8
150,319	-				+1.0
150,319	-				-0.2
150,319	-				+1.9
150,319	-				+1.9
150,319	-				+1.2
150,382	+				-1.6
150,383	-				+0.3
150,383	-				+1.5
150,383	-				-0.2
150,383	-				+0.7
150,389	-				+1.4
150,395	+				-1.6
150,534	-		EX31_RS03300	0.23	+1.8
150,617	-		EX31_RS03300	0.32	+0.5
150,617	-		EX31_RS03300	0.32	-0.9
150,619	+		EX31_RS03300	0.33	-0.6
150,620	-		EX31_RS03300	0.33	-3.5
150,658	-		EX31_RS03300	0.37	+0.2
150,658	-		EX31_RS03300	0.37	+0.6
150,729	-		EX31_RS03300	0.45	-2.0
150,729	-		EX31_RS03300	0.45	+0.8
150,729	-		EX31_RS03300	0.45	-2.2
150,927	+		EX31_RS03300	0.66	-2.9
150,940	+		EX31_RS03300	0.67	+0.4
150,980	-		EX31_RS03300	0.72	-3.0
151,024	+		EX31_RS03300	0.77	-0.0
151,187	+				+0.4
151,187	+				+0.1
151,188	-				-2.4
151,188	-				-2.7
151,201	-				-0.9
151,233	+				+0.6
151,233	+				+0.7
151,233	+				-1.9
151,233	+				-0.3
151,233	+				+0.8
151,233	+				-1.9
151,234	-				-3.5
151,234	-				-3.9
151,234	-				-2.5
151,234	-				+1.4
151,234	-				+0.9
151,252	-				+0.2
151,275	+				-1.9
151,275	+				+0.3
151,275	+				+1.2
151,275	+				+3.5
151,275	+				-1.2
151,275	+				-1.2
151,276	-				-0.0
151,276	-				-0.2
151,276	-				-0.0
151,276	-				+1.1
151,329	+				+2.7
151,329	+				-2.3
151,329	+				+0.2
151,329	+				-2.2
151,330	-				-3.2
151,331	+				-1.2
151,331	+				-1.0
151,331	+				-0.9
151,331	+				+0.8
151,331	+				+1.1
151,331	+				-1.9
151,331	+				-0.6
151,331	+				-1.6
151,332	-				-0.3
151,332	-				+0.4
151,332	-				-4.0
151,332	-				-0.4
151,332	-				+0.0
151,332	-				-1.2
151,332	-				+0.5
151,332	-				-1.7
151,332	-				-0.4
151,332	-				-2.3
151,332	-				+0.3
151,334	+				-2.9
151,334	+				+1.3
151,334	+				+1.5
151,334	+				+0.8
151,335	-				+2.5
151,335	-				+0.5
151,335	-				-2.7
151,335	-				+3.1
151,335	-				+0.6
151,335	-				+1.4
151,355	+				-0.2
151,355	+				-1.6
151,355	+				-0.9
151,365	+				+0.8
151,366	-				+1.1
151,366	-				-2.3
151,366	-				-0.5
151,366	-				+1.4
151,368	+				+1.0
151,368	+				+0.4
151,368	+				-1.4
151,386	+				-0.2
151,386	+				-0.9
151,386	+				+1.9
151,386	+				-0.2
151,386	+				-0.9
151,386	-				+2.2
151,387	-				+0.5
151,387	-				+1.4
151,387	-				+1.5
151,387	-				-1.7
151,387	-				+1.4
151,387	-				-0.2
151,600	+		EX31_RS03305	0.34	-2.0
151,600	+		EX31_RS03305	0.34	+2.6
151,600	+		EX31_RS03305	0.34	+0.4
151,600	+		EX31_RS03305	0.34	+0.1
151,601	-		EX31_RS03305	0.34	+1.3
151,622	+		EX31_RS03305	0.37	-0.5
151,622	+		EX31_RS03305	0.37	-1.2
151,622	+		EX31_RS03305	0.37	-1.6
151,622	+		EX31_RS03305	0.37	-0.6
151,622	+		EX31_RS03305	0.37	-2.7
151,622	+		EX31_RS03305	0.37	-2.3
151,622	+		EX31_RS03305	0.37	-0.9
151,622	+		EX31_RS03305	0.37	-0.4
151,622	+		EX31_RS03305	0.37	+1.0
151,622	+		EX31_RS03305	0.37	-2.0
151,622	+		EX31_RS03305	0.37	+1.4
151,623	-		EX31_RS03305	0.38	-0.9
151,623	-		EX31_RS03305	0.38	+2.3
151,658	-		EX31_RS03305	0.43	+2.5
151,658	-		EX31_RS03305	0.43	-2.7
151,671	-		EX31_RS03305	0.45	+0.5
151,726	+		EX31_RS03305	0.53	+0.2
151,726	+		EX31_RS03305	0.53	+2.1
151,727	-		EX31_RS03305	0.53	+1.4
151,727	-		EX31_RS03305	0.53	+0.6
151,758	-		EX31_RS03305	0.58	+0.3
151,812	+		EX31_RS03305	0.66	-0.3
151,812	+		EX31_RS03305	0.66	+0.9
151,812	+		EX31_RS03305	0.66	+1.3
151,812	+		EX31_RS03305	0.66	+0.6
151,813	-		EX31_RS03305	0.67	+2.2
151,813	-		EX31_RS03305	0.67	+1.4
151,813	-		EX31_RS03305	0.67	-3.0
151,813	-		EX31_RS03305	0.67	+1.3
151,813	-		EX31_RS03305	0.67	-3.4
151,813	-		EX31_RS03305	0.67	+0.7
151,813	-		EX31_RS03305	0.67	-0.3
151,813	-		EX31_RS03305	0.67	-1.4
151,813	-		EX31_RS03305	0.67	-0.5
151,842	-		EX31_RS03305	0.71	-2.5
151,917	-		EX31_RS03305	0.82	-0.9
152,049	-				+1.0
152,103	-				-2.0
152,105	+				-0.9
152,126	-				+0.3
152,168	+				-0.9
152,168	+				+0.8
152,168	+				-0.9
152,169	-				+0.2
152,169	-				-1.9
152,169	-				-0.3
152,170	+				+2.0
152,170	+				-2.8
152,170	+				-0.9
152,170	+				+0.4
152,170	+				-0.9
152,170	+				+1.4
152,170	+				+0.5
152,170	+				+1.4
152,170	+				-1.2
152,170	+				-1.4
152,170	+				+1.0
152,170	+				-1.6
152,171	-				-1.1
152,171	-				-0.2
152,171	-				-2.5
152,171	-				+2.6
152,171	-				-1.4
152,171	-				-1.0
152,171	-				+1.4
152,171	-				-1.7
152,171	-				+0.1
152,171	-				+1.8
152,171	-				-2.6