Strain Fitness in Rahnella sp. WP5 around EX31_RS02800

Experiment: NLDM_metabolites (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_metabolites (C)
30,063	-		EX31_RS02795	0.40	-2.8
30,098	-		EX31_RS02795	0.43	-1.9
30,138	-		EX31_RS02795	0.46	-0.3
30,154	+		EX31_RS02795	0.48	-2.3
30,155	-		EX31_RS02795	0.48	+1.7
30,194	+		EX31_RS02795	0.51	-0.6
30,194	+		EX31_RS02795	0.51	-0.9
30,195	-		EX31_RS02795	0.51	-1.2
30,228	+		EX31_RS02795	0.54	+0.4
30,228	+		EX31_RS02795	0.54	-2.0
30,228	+		EX31_RS02795	0.54	+2.1
30,228	+		EX31_RS02795	0.54	-2.4
30,229	-		EX31_RS02795	0.54	+1.4
30,229	-		EX31_RS02795	0.54	-0.0
30,229	-		EX31_RS02795	0.54	+1.6
30,229	-		EX31_RS02795	0.54	-2.2
30,229	-		EX31_RS02795	0.54	+1.3
30,229	-		EX31_RS02795	0.54	-0.6
30,283	+		EX31_RS02795	0.59	+1.9
30,284	-		EX31_RS02795	0.59	-1.9
30,284	-		EX31_RS02795	0.59	+0.0
30,284	-		EX31_RS02795	0.59	-0.6
30,284	-		EX31_RS02795	0.59	-0.2
30,284	-		EX31_RS02795	0.59	+1.9
30,285	+		EX31_RS02795	0.59	+1.1
30,285	+		EX31_RS02795	0.59	-1.4
30,286	-		EX31_RS02795	0.59	+2.4
30,286	-		EX31_RS02795	0.59	-0.9
30,286	-		EX31_RS02795	0.59	-0.2
30,307	+		EX31_RS02795	0.61	-0.2
30,356	+		EX31_RS02795	0.66	-0.5
30,356	+		EX31_RS02795	0.66	-1.4
30,356	+		EX31_RS02795	0.66	+1.5
30,356	+		EX31_RS02795	0.66	+1.2
30,357	-		EX31_RS02795	0.66	-0.6
30,360	+		EX31_RS02795	0.66	+1.3
30,360	+		EX31_RS02795	0.66	+2.5
30,361	-		EX31_RS02795	0.66	-2.9
30,361	-		EX31_RS02795	0.66	-1.2
30,361	-		EX31_RS02795	0.66	-2.4
30,361	-		EX31_RS02795	0.66	+1.4
30,367	-		EX31_RS02795	0.66	+0.4
30,371	+		EX31_RS02795	0.67	+0.4
30,372	-		EX31_RS02795	0.67	+0.3
30,458	+		EX31_RS02795	0.75	+2.0
30,463	+		EX31_RS02795	0.75	-2.5
30,463	+		EX31_RS02795	0.75	-2.1
30,464	-		EX31_RS02795	0.75	+0.2
30,464	-		EX31_RS02795	0.75	-3.0
30,473	+		EX31_RS02795	0.76	+2.4
30,473	+		EX31_RS02795	0.76	-0.0
30,473	+		EX31_RS02795	0.76	-2.4
30,473	+		EX31_RS02795	0.76	-0.2
30,474	-		EX31_RS02795	0.76	-1.9
30,474	-		EX31_RS02795	0.76	+1.6
30,474	-		EX31_RS02795	0.76	+1.4
30,474	-		EX31_RS02795	0.76	-1.2
30,474	-		EX31_RS02795	0.76	-1.6
30,476	-		EX31_RS02795	0.76	-0.6
30,476	-		EX31_RS02795	0.76	-0.4
30,476	-		EX31_RS02795	0.76	+1.8
30,492	+		EX31_RS02795	0.78	-1.9
30,492	+		EX31_RS02795	0.78	+2.6
30,493	-		EX31_RS02795	0.78	+1.6
30,493	-		EX31_RS02795	0.78	-2.4
30,493	-		EX31_RS02795	0.78	-2.8
30,493	-		EX31_RS02795	0.78	+1.1
30,495	+		EX31_RS02795	0.78	+0.6
30,495	+		EX31_RS02795	0.78	-1.6
30,496	-		EX31_RS02795	0.78	+1.7
30,496	-		EX31_RS02795	0.78	+1.4
30,501	+		EX31_RS02795	0.78	-1.2
30,502	-		EX31_RS02795	0.78	-0.6
30,508	+		EX31_RS02795	0.79	-1.4
30,508	+		EX31_RS02795	0.79	+2.4
30,614	-		EX31_RS02795	0.88	-1.8
30,662	+				-0.2
30,685	+				+0.9
30,685	+				-0.6
30,686	-				-0.6
30,686	-				+2.2
30,686	-				+1.7
30,686	-				-1.9
30,711	-				+0.2
30,782	+				-0.6
30,782	+				+0.4
30,783	-				-2.3
31,158	+				-1.2
31,158	+				+1.4
31,268	-		EX31_RS02800	0.20	-1.1
31,442	-		EX31_RS02800	0.36	-0.6
31,444	-		EX31_RS02800	0.36	-2.3
31,475	-		EX31_RS02800	0.39	+0.7
31,495	+		EX31_RS02800	0.41	+1.1
31,495	+		EX31_RS02800	0.41	+2.0
31,495	+		EX31_RS02800	0.41	+0.4
31,495	+		EX31_RS02800	0.41	+0.1
31,573	+		EX31_RS02800	0.48	-0.2
31,587	+		EX31_RS02800	0.49	-0.7
31,665	-		EX31_RS02800	0.57	-0.2
31,742	+		EX31_RS02800	0.64	-0.9
31,743	-		EX31_RS02800	0.64	+0.5
31,757	-		EX31_RS02800	0.65	+0.7
31,757	-		EX31_RS02800	0.65	-3.1
31,764	+		EX31_RS02800	0.66	+1.6
31,765	-		EX31_RS02800	0.66	+0.8
31,793	-		EX31_RS02800	0.68	-1.8
31,793	-		EX31_RS02800	0.68	-0.2
31,795	+		EX31_RS02800	0.69	-2.8
31,796	-		EX31_RS02800	0.69	-2.2
31,796	-		EX31_RS02800	0.69	+0.5
31,796	-		EX31_RS02800	0.69	-2.0
31,797	+		EX31_RS02800	0.69	-1.9
31,798	-		EX31_RS02800	0.69	+1.1
31,800	-		EX31_RS02800	0.69	+0.4
31,813	+		EX31_RS02800	0.70	+2.1
31,814	-		EX31_RS02800	0.70	-1.9
31,980	+		EX31_RS02800	0.86	+0.6
31,984	+		EX31_RS02800	0.86	+1.4
32,066	+				+1.0
32,161	+				-2.2
32,410	+				+0.4
32,510	+				+1.5
32,511	-				+3.7
32,552	+				-1.8
32,552	+				+0.7
32,552	+				-0.2
32,552	+				-3.0
32,552	+				+1.8
32,552	+				+1.7
32,553	-				-0.2
32,553	-				-1.2
32,553	-				-1.1
32,553	-				+0.6
32,553	-				-1.6
32,553	-				-2.0
32,596	-				-2.0
32,613	+				+1.1
32,662	+				+1.4
32,662	+				+0.6
32,662	+				-0.6
32,662	+				+1.0
32,663	-				+1.5
32,663	-				-0.2
32,663	-				-0.3
32,663	-				+1.1
32,663	-				-0.7
32,663	-				+0.4
32,678	+				+0.3
32,679	-				-1.1
32,786	-		EX31_RS02805	0.13	-1.2
32,824	+		EX31_RS02805	0.15	-1.9
32,849	+		EX31_RS02805	0.16	+1.5
32,849	+		EX31_RS02805	0.16	+1.3
32,849	+		EX31_RS02805	0.16	+1.6
32,857	-		EX31_RS02805	0.17	+3.2
32,857	-		EX31_RS02805	0.17	+1.6
32,888	+		EX31_RS02805	0.18	-2.8
32,888	+		EX31_RS02805	0.18	-1.4
32,889	-		EX31_RS02805	0.18	-1.4
32,889	-		EX31_RS02805	0.18	+0.1
32,889	-		EX31_RS02805	0.18	+2.5
32,889	-		EX31_RS02805	0.18	-2.4
32,889	-		EX31_RS02805	0.18	+1.6
32,963	+		EX31_RS02805	0.22	+1.8
32,963	+		EX31_RS02805	0.22	-2.0
32,963	+		EX31_RS02805	0.22	-2.3
32,963	+		EX31_RS02805	0.22	+0.8
32,963	+		EX31_RS02805	0.22	+1.3
32,963	+		EX31_RS02805	0.22	+1.7
32,963	+		EX31_RS02805	0.22	+1.3
32,963	+		EX31_RS02805	0.22	-0.6
32,964	-		EX31_RS02805	0.22	-1.9
32,964	-		EX31_RS02805	0.22	+0.4
33,089	+		EX31_RS02805	0.28	+2.9
33,089	+		EX31_RS02805	0.28	+0.9
33,089	+		EX31_RS02805	0.28	-2.8
33,090	-		EX31_RS02805	0.28	-2.0
33,090	-		EX31_RS02805	0.28	-0.6
33,090	-		EX31_RS02805	0.28	+1.3
33,090	-		EX31_RS02805	0.28	-2.3
33,090	-		EX31_RS02805	0.28	-0.2
33,090	-		EX31_RS02805	0.28	+0.5
33,090	-		EX31_RS02805	0.28	+1.1
33,128	+		EX31_RS02805	0.29	-1.2
33,128	+		EX31_RS02805	0.29	-0.9
33,129	-		EX31_RS02805	0.29	+3.0