Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13810

Experiment: L-Valine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (N)
3,462,612	+		CA265_RS13805	0.19	-0.1
3,462,631	+		CA265_RS13805	0.20	+0.3
3,462,650	+		CA265_RS13805	0.22	-0.6
3,462,650	+		CA265_RS13805	0.22	+0.8
3,462,652	+		CA265_RS13805	0.22	+0.9
3,462,712	+		CA265_RS13805	0.28	-0.1
3,462,712	+		CA265_RS13805	0.28	-0.3
3,462,732	+		CA265_RS13805	0.29	+0.0
3,462,782	+		CA265_RS13805	0.34	-0.3
3,462,823	+		CA265_RS13805	0.38	-0.3
3,462,948	-		CA265_RS13805	0.49	+0.1
3,462,948	-		CA265_RS13805	0.49	-0.3
3,462,948	-		CA265_RS13805	0.49	-1.6
3,462,979	+		CA265_RS13805	0.51	+0.1
3,462,980	-		CA265_RS13805	0.51	-1.5
3,462,980	-		CA265_RS13805	0.51	-0.2
3,462,992	+		CA265_RS13805	0.52	+0.1
3,463,004	+		CA265_RS13805	0.54	-0.5
3,463,015	-		CA265_RS13805	0.55	-1.7
3,463,023	-		CA265_RS13805	0.55	+0.1
3,463,024	+		CA265_RS13805	0.55	+0.1
3,463,025	-		CA265_RS13805	0.55	-0.1
3,463,025	-		CA265_RS13805	0.55	-0.2
3,463,104	+		CA265_RS13805	0.62	+0.4
3,463,128	+		CA265_RS13805	0.65	+0.2
3,463,178	+		CA265_RS13805	0.69	+1.4
3,463,178	+		CA265_RS13805	0.69	-0.1
3,463,179	-		CA265_RS13805	0.69	+1.2
3,463,242	+		CA265_RS13805	0.75	-1.8
3,463,242	+		CA265_RS13805	0.75	+0.5
3,463,268	+		CA265_RS13805	0.77	-1.3
3,463,269	-		CA265_RS13805	0.77	-1.5
3,463,275	-		CA265_RS13805	0.78	-1.1
3,463,275	-		CA265_RS13805	0.78	+1.3
3,463,277	+		CA265_RS13805	0.78	-1.8
3,463,277	+		CA265_RS13805	0.78	-0.7
3,463,325	+		CA265_RS13805	0.82	-1.5
3,463,398	+		CA265_RS13805	0.88	-0.8
3,463,399	-		CA265_RS13805	0.89	+0.2
3,463,430	-				-0.6
3,463,487	-				-0.5
3,463,498	+				+0.1
3,463,499	-				-0.1
3,463,515	+				+1.0
3,463,516	-				+1.0
3,463,540	+				-1.0
3,463,546	-				-0.8
3,463,637	+				+0.1
3,463,645	+				-0.2
3,463,683	-				+0.5
3,463,689	+				-1.3
3,463,690	-				-0.1
3,463,690	-				-0.3
3,463,847	-		CA265_RS13810	0.10	+0.4
3,463,847	-		CA265_RS13810	0.10	+1.4
3,463,921	+		CA265_RS13810	0.13	+0.3
3,463,977	-		CA265_RS13810	0.15	-1.2
3,463,991	-		CA265_RS13810	0.15	-0.6
3,464,020	+		CA265_RS13810	0.16	-0.1
3,464,021	-		CA265_RS13810	0.16	+0.1
3,464,148	+		CA265_RS13810	0.21	-1.2
3,464,151	+		CA265_RS13810	0.21	+0.4
3,464,153	+		CA265_RS13810	0.21	+1.9
3,464,265	-		CA265_RS13810	0.25	-1.5
3,464,270	-		CA265_RS13810	0.25	+1.3
3,464,270	-		CA265_RS13810	0.25	+0.4
3,464,284	+		CA265_RS13810	0.25	-1.4
3,464,312	+		CA265_RS13810	0.26	-0.9
3,464,314	+		CA265_RS13810	0.27	+0.3
3,464,315	-		CA265_RS13810	0.27	-0.2
3,464,315	-		CA265_RS13810	0.27	+0.8
3,464,570	+		CA265_RS13810	0.35	-0.4
3,464,600	+		CA265_RS13810	0.36	+0.4
3,464,782	+		CA265_RS13810	0.43	-0.4
3,464,820	+		CA265_RS13810	0.44	-1.0
3,464,820	+		CA265_RS13810	0.44	+2.3
3,464,821	-		CA265_RS13810	0.44	-1.0
3,464,853	+		CA265_RS13810	0.45	-0.0
3,464,934	-		CA265_RS13810	0.48	-0.5
3,464,934	-		CA265_RS13810	0.48	-2.7
3,464,938	+		CA265_RS13810	0.48	+0.3
3,464,939	-		CA265_RS13810	0.48	+0.9
3,464,991	+		CA265_RS13810	0.50	-0.3
3,464,992	-		CA265_RS13810	0.50	-0.3
3,465,029	-		CA265_RS13810	0.51	+0.5
3,465,085	+		CA265_RS13810	0.53	-0.6
3,465,099	+		CA265_RS13810	0.54	+0.5
3,465,241	+		CA265_RS13810	0.58	+1.2
3,465,288	-		CA265_RS13810	0.60	-0.3
3,465,316	+		CA265_RS13810	0.61	-0.6
3,465,320	+		CA265_RS13810	0.61	-0.7
3,465,373	+		CA265_RS13810	0.63	-0.0
3,465,373	+		CA265_RS13810	0.63	-0.5
3,465,373	+		CA265_RS13810	0.63	-0.1
3,465,374	-		CA265_RS13810	0.63	-1.6
3,465,516	-		CA265_RS13810	0.68	-0.9
3,465,545	+		CA265_RS13810	0.69	-1.2
3,465,604	-		CA265_RS13810	0.71	+0.5
3,465,614	+		CA265_RS13810	0.71	-0.1
3,465,614	+		CA265_RS13810	0.71	-1.4
3,465,668	-		CA265_RS13810	0.73	-0.2
3,465,829	+		CA265_RS13810	0.79	-0.1
3,465,830	-		CA265_RS13810	0.79	+0.5
3,465,961	+		CA265_RS13810	0.83	-0.2
3,466,017	+		CA265_RS13810	0.85	+0.8
3,466,022	+		CA265_RS13810	0.85	-1.9
3,466,031	+		CA265_RS13810	0.86	+0.4
3,466,031	+		CA265_RS13810	0.86	+0.5
3,466,032	-		CA265_RS13810	0.86	-1.6
3,466,097	-		CA265_RS13810	0.88	+0.2
3,466,133	+		CA265_RS13810	0.89	-0.2
3,466,186	+				-0.5
3,466,191	+				-0.4
3,466,222	+				+0.5
3,466,225	+				+0.1
3,466,226	-				-0.0
3,466,307	+				+0.1
3,466,308	-				+0.5
3,466,321	+				+0.3
3,466,409	+				-1.8
3,466,482	+				+0.3
3,466,525	-				+0.6
3,466,553	+				-0.9
3,466,557	+				+0.5
3,466,612	+				-0.2
3,466,613	-				+0.1
3,466,694	+		CA265_RS13815	0.19	+0.5
3,466,704	+		CA265_RS13815	0.20	-0.9
3,466,772	+		CA265_RS13815	0.29	+0.0
3,466,773	-		CA265_RS13815	0.29	+0.6
3,466,786	+		CA265_RS13815	0.31	-0.0
3,466,895	+		CA265_RS13815	0.44	-1.4
3,466,901	+		CA265_RS13815	0.45	+0.2
3,466,902	-		CA265_RS13815	0.45	+1.3
3,466,934	+		CA265_RS13815	0.49	-2.2
3,466,966	+		CA265_RS13815	0.53	+0.3
3,466,967	-		CA265_RS13815	0.54	-0.1
3,466,989	+		CA265_RS13815	0.56	-0.1
3,466,989	+		CA265_RS13815	0.56	+0.5
3,467,014	-		CA265_RS13815	0.59	+0.1
3,467,153	-		CA265_RS13815	0.77	+0.7
3,467,153	-		CA265_RS13815	0.77	-0.3
3,467,240	-		CA265_RS13815	0.88	-0.4
3,467,296	-				-0.0
3,467,309	-				+0.5
3,467,314	+				-0.1
3,467,314	+				+0.7
3,467,315	-				+0.3
3,467,319	-				-0.3
3,467,366	-				-0.3
3,467,394	+				-1.1
3,467,397	+				-0.2
3,467,398	-				+0.3