Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS12495

Experiment: L-Valine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (N)
3,120,927	+		CA265_RS12490	0.49	-0.3
3,120,928	-		CA265_RS12490	0.49	-1.5
3,120,980	-		CA265_RS12490	0.52	-1.3
3,121,022	+		CA265_RS12490	0.54	+0.5
3,121,048	+		CA265_RS12490	0.56	+1.0
3,121,049	-		CA265_RS12490	0.56	-1.1
3,121,049	-		CA265_RS12490	0.56	+1.2
3,121,049	-		CA265_RS12490	0.56	+0.4
3,121,049	-		CA265_RS12490	0.56	+0.2
3,121,074	-		CA265_RS12490	0.57	-1.0
3,121,074	-		CA265_RS12490	0.57	-1.6
3,121,074	-		CA265_RS12490	0.57	-0.6
3,121,116	+		CA265_RS12490	0.59	+0.3
3,121,116	+		CA265_RS12490	0.59	+1.9
3,121,126	+		CA265_RS12490	0.60	+0.1
3,121,130	+		CA265_RS12490	0.60	-0.6
3,121,237	-		CA265_RS12490	0.66	-1.1
3,121,265	+		CA265_RS12490	0.67	-0.6
3,121,266	-		CA265_RS12490	0.67	-1.1
3,121,270	+		CA265_RS12490	0.68	-1.3
3,121,291	+		CA265_RS12490	0.69	-0.8
3,121,314	+		CA265_RS12490	0.70	+0.2
3,121,407	+		CA265_RS12490	0.75	+0.0
3,121,407	+		CA265_RS12490	0.75	-0.1
3,121,460	-		CA265_RS12490	0.78	-0.3
3,121,460	-		CA265_RS12490	0.78	-0.6
3,121,546	+		CA265_RS12490	0.83	+0.1
3,121,547	-		CA265_RS12490	0.83	-0.6
3,121,570	+		CA265_RS12490	0.84	+1.0
3,121,571	-		CA265_RS12490	0.84	+0.3
3,121,577	-		CA265_RS12490	0.85	-0.6
3,121,577	-		CA265_RS12490	0.85	+0.4
3,121,634	+		CA265_RS12490	0.88	-0.3
3,121,635	-		CA265_RS12490	0.88	-0.4
3,121,638	-		CA265_RS12490	0.88	-0.0
3,121,638	-		CA265_RS12490	0.88	-0.0
3,121,692	+				+1.2
3,121,749	+				-0.7
3,121,789	-				-0.7
3,121,825	-				-0.2
3,121,831	+				+0.8
3,121,832	-				+0.0
3,121,872	+				-0.1
3,121,889	-				-0.1
3,122,176	-		CA265_RS12495	0.11	+0.2
3,122,176	-		CA265_RS12495	0.11	-1.3
3,122,182	-		CA265_RS12495	0.12	-1.2
3,122,275	+		CA265_RS12495	0.16	-0.8
3,122,276	-		CA265_RS12495	0.16	+0.1
3,122,276	-		CA265_RS12495	0.16	-0.8
3,122,296	+		CA265_RS12495	0.17	+0.6
3,122,297	-		CA265_RS12495	0.17	-0.3
3,122,330	+		CA265_RS12495	0.18	-0.3
3,122,350	-		CA265_RS12495	0.19	+0.9
3,122,350	-		CA265_RS12495	0.19	-0.3
3,122,363	-		CA265_RS12495	0.20	-0.6
3,122,406	-		CA265_RS12495	0.22	+0.1
3,122,448	+		CA265_RS12495	0.24	+0.6
3,122,562	-		CA265_RS12495	0.29	-0.6
3,122,615	+		CA265_RS12495	0.31	+0.4
3,122,616	-		CA265_RS12495	0.31	-0.3
3,122,616	-		CA265_RS12495	0.31	-0.0
3,122,619	-		CA265_RS12495	0.31	-0.2
3,122,741	-		CA265_RS12495	0.37	-0.7
3,122,741	-		CA265_RS12495	0.37	+0.4
3,122,744	+		CA265_RS12495	0.37	+0.7
3,122,744	+		CA265_RS12495	0.37	-1.5
3,122,749	-		CA265_RS12495	0.37	+0.1
3,122,809	-		CA265_RS12495	0.40	-0.1
3,122,845	-		CA265_RS12495	0.41	-0.2
3,122,845	-		CA265_RS12495	0.41	+1.8
3,122,855	+		CA265_RS12495	0.42	-1.6
3,122,856	-		CA265_RS12495	0.42	-0.5
3,122,898	+		CA265_RS12495	0.44	-0.2
3,122,899	-		CA265_RS12495	0.44	-1.5
3,122,938	+				-0.4
3,122,944	-		CA265_RS12495	0.46	+0.4
3,122,944	-		CA265_RS12495	0.46	+0.6
3,122,944	-		CA265_RS12495	0.46	+1.0
3,122,944	-		CA265_RS12495	0.46	-0.4
3,123,007	-		CA265_RS12495	0.49	+0.7
3,123,042	+		CA265_RS12495	0.50	-0.3
3,123,043	-		CA265_RS12495	0.50	-0.0
3,123,043	-		CA265_RS12495	0.50	-0.5
3,123,053	-		CA265_RS12495	0.51	-0.9
3,123,053	-		CA265_RS12495	0.51	-1.3
3,123,056	+		CA265_RS12495	0.51	+0.4
3,123,058	+		CA265_RS12495	0.51	-0.4
3,123,169	+		CA265_RS12495	0.56	+0.2
3,123,169	+		CA265_RS12495	0.56	+0.2
3,123,170	-		CA265_RS12495	0.56	+0.7
3,123,170	-		CA265_RS12495	0.56	-0.7
3,123,170	-		CA265_RS12495	0.56	-0.2
3,123,199	-		CA265_RS12495	0.57	+0.8
3,123,211	-		CA265_RS12495	0.58	-0.5
3,123,243	-		CA265_RS12495	0.59	+1.4
3,123,310	-		CA265_RS12495	0.62	+1.1
3,123,344	+		CA265_RS12495	0.64	+0.2
3,123,365	-		CA265_RS12495	0.64	+1.8
3,123,463	-		CA265_RS12495	0.69	-0.1
3,123,468	-		CA265_RS12495	0.69	-0.5
3,123,533	+		CA265_RS12495	0.72	+0.3
3,123,607	+		CA265_RS12495	0.75	+0.1
3,123,725	-		CA265_RS12495	0.81	+0.2
3,123,727	-		CA265_RS12495	0.81	-2.0
3,123,769	+		CA265_RS12495	0.83	-1.5
3,123,769	+		CA265_RS12495	0.83	-3.0
3,123,769	+		CA265_RS12495	0.83	+0.1
3,123,770	-		CA265_RS12495	0.83	+0.4
3,123,770	-		CA265_RS12495	0.83	+0.6
3,123,770	-		CA265_RS12495	0.83	-2.5
3,123,773	+		CA265_RS12495	0.83	-0.8
3,123,798	-		CA265_RS12495	0.84	-0.6
3,123,870	-		CA265_RS12495	0.87	-0.5
3,123,880	-		CA265_RS12495	0.87	+0.4
3,123,880	-		CA265_RS12495	0.87	-0.1
3,123,880	-		CA265_RS12495	0.87	-0.3
3,124,052	+				+0.6
3,124,053	-				-0.1
3,124,194	+				-0.7
3,124,194	+				+0.4
3,124,211	+				+0.6
3,124,217	-				+0.2
3,124,227	-				+0.2
3,124,347	+				+0.4
3,124,414	-		CA265_RS12500	0.10	+0.4
3,124,421	-		CA265_RS12500	0.11	+1.0
3,124,513	+		CA265_RS12500	0.15	-1.1
3,124,598	+		CA265_RS12500	0.19	+0.1
3,124,598	+		CA265_RS12500	0.19	-0.6
3,124,599	-		CA265_RS12500	0.19	-1.0
3,124,648	+		CA265_RS12500	0.21	-0.1
3,124,751	+		CA265_RS12500	0.26	+0.7
3,124,752	-		CA265_RS12500	0.26	+0.5
3,124,752	-		CA265_RS12500	0.26	-0.2
3,124,789	+		CA265_RS12500	0.28	-0.6
3,124,790	-		CA265_RS12500	0.28	+0.5
3,124,961	-		CA265_RS12500	0.36	+0.0
3,124,961	-		CA265_RS12500	0.36	+0.1
3,124,999	+		CA265_RS12500	0.38	+1.9
3,125,088	+		CA265_RS12500	0.42	-0.0
3,125,089	-		CA265_RS12500	0.42	+0.2
3,125,089	-		CA265_RS12500	0.42	-0.2
3,125,110	-		CA265_RS12500	0.43	+0.1
3,125,129	-		CA265_RS12500	0.44	+0.9
3,125,132	-		CA265_RS12500	0.44	+0.4