Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS12060

Experiment: L-Valine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (N)
2,982,451	+		CA265_RS12055	0.15	+0.8
2,982,455	+		CA265_RS12055	0.15	+0.3
2,982,456	-		CA265_RS12055	0.15	-0.6
2,982,456	-		CA265_RS12055	0.15	+0.9
2,982,485	-		CA265_RS12055	0.18	+0.8
2,982,514	-		CA265_RS12055	0.20	+0.5
2,982,514	-		CA265_RS12055	0.20	+0.6
2,982,533	+		CA265_RS12055	0.22	+0.3
2,982,547	-		CA265_RS12055	0.23	-1.9
2,982,549	+		CA265_RS12055	0.23	+0.1
2,982,560	+		CA265_RS12055	0.24	+1.1
2,982,633	-		CA265_RS12055	0.31	-0.2
2,982,634	+		CA265_RS12055	0.31	-0.6
2,982,634	+		CA265_RS12055	0.31	+0.6
2,982,635	-		CA265_RS12055	0.31	-0.2
2,982,687	-		CA265_RS12055	0.36	-0.4
2,982,690	-		CA265_RS12055	0.36	-3.0
2,982,693	+		CA265_RS12055	0.36	-1.5
2,982,701	+		CA265_RS12055	0.37	-0.6
2,982,702	-		CA265_RS12055	0.37	-1.4
2,982,825	-		CA265_RS12055	0.48	-0.6
2,982,825	-		CA265_RS12055	0.48	+0.2
2,982,830	+		CA265_RS12055	0.48	+2.5
2,982,830	+		CA265_RS12055	0.48	+0.8
2,982,890	+		CA265_RS12055	0.54	-0.2
2,982,928	-		CA265_RS12055	0.57	+0.3
2,982,933	+		CA265_RS12055	0.57	+0.2
2,982,938	-		CA265_RS12055	0.58	-0.2
2,982,986	+		CA265_RS12055	0.62	-0.2
2,983,053	+		CA265_RS12055	0.68	+1.0
2,983,053	+		CA265_RS12055	0.68	+0.0
2,983,062	-		CA265_RS12055	0.69	+0.2
2,983,126	+		CA265_RS12055	0.75	-2.0
2,983,126	+		CA265_RS12055	0.75	-0.3
2,983,130	+		CA265_RS12055	0.75	-0.4
2,983,131	-		CA265_RS12055	0.75	+0.4
2,983,134	+		CA265_RS12055	0.75	-0.4
2,983,152	-		CA265_RS12055	0.77	+0.8
2,983,212	-		CA265_RS12055	0.82	+0.2
2,983,259	+		CA265_RS12055	0.87	-0.2
2,983,260	-		CA265_RS12055	0.87	-0.8
2,983,298	-				-1.0
2,983,328	+				+0.6
2,983,350	-				+0.2
2,983,358	+				+0.6
2,983,358	+				-0.8
2,983,365	+				+0.3
2,983,377	+				+0.2
2,983,377	+				+0.0
2,983,410	+				-0.4
2,983,411	-				+0.6
2,983,440	-				+0.6
2,983,452	+				+0.4
2,983,494	-				+0.0
2,983,526	+				+1.3
2,983,527	-				+0.3
2,983,527	-				-0.0
2,983,572	+				-0.9
2,983,573	-				-0.7
2,983,614	-				-0.5
2,983,659	+				-1.2
2,983,659	+				+0.2
2,983,660	-				-2.4
2,983,660	-				-1.2
2,983,668	-				-0.5
2,983,674	-				+0.1
2,983,692	+				+0.4
2,983,748	+		CA265_RS12060	0.11	-0.0
2,983,749	-		CA265_RS12060	0.11	-0.8
2,983,791	-		CA265_RS12060	0.12	-0.2
2,983,796	+		CA265_RS12060	0.12	+0.6
2,983,805	+		CA265_RS12060	0.13	-0.5
2,983,805	+		CA265_RS12060	0.13	+0.2
2,983,926	+		CA265_RS12060	0.17	-0.4
2,983,995	-		CA265_RS12060	0.19	+0.6
2,984,007	+		CA265_RS12060	0.20	+0.2
2,984,057	+		CA265_RS12060	0.21	-0.2
2,984,058	-		CA265_RS12060	0.21	-0.6
2,984,115	-		CA265_RS12060	0.23	+0.1
2,984,226	-		CA265_RS12060	0.27	+0.4
2,984,269	-		CA265_RS12060	0.29	-0.4
2,984,282	+		CA265_RS12060	0.29	-0.3
2,984,319	+		CA265_RS12060	0.31	-0.0
2,984,321	+		CA265_RS12060	0.31	+0.6
2,984,341	+		CA265_RS12060	0.31	-0.1
2,984,341	+		CA265_RS12060	0.31	-0.5
2,984,359	+		CA265_RS12060	0.32	-0.2
2,984,398	-		CA265_RS12060	0.33	+0.8
2,984,491	+		CA265_RS12060	0.37	-0.5
2,984,562	+		CA265_RS12060	0.39	+0.3
2,984,567	+		CA265_RS12060	0.39	-0.6
2,984,641	-		CA265_RS12060	0.42	+0.4
2,984,641	-		CA265_RS12060	0.42	-1.6
2,984,641	-		CA265_RS12060	0.42	-1.1
2,984,786	+		CA265_RS12060	0.47	-0.2
2,984,786	+		CA265_RS12060	0.47	+0.2
2,984,801	+		CA265_RS12060	0.47	-0.0
2,984,836	+		CA265_RS12060	0.49	+1.1
2,984,836	+		CA265_RS12060	0.49	+0.1
2,984,837	-		CA265_RS12060	0.49	-1.2
2,984,893	-		CA265_RS12060	0.51	-0.8
2,984,935	-		CA265_RS12060	0.52	-1.9
2,984,965	-		CA265_RS12060	0.53	+0.1
2,984,992	+		CA265_RS12060	0.54	+0.0
2,984,992	+		CA265_RS12060	0.54	+0.8
2,984,993	-		CA265_RS12060	0.54	-0.5
2,984,993	-		CA265_RS12060	0.54	-2.7
2,984,993	-		CA265_RS12060	0.54	-0.3
2,985,022	+		CA265_RS12060	0.55	+0.6
2,985,022	+		CA265_RS12060	0.55	-1.0
2,985,023	-		CA265_RS12060	0.55	-2.0
2,985,034	+		CA265_RS12060	0.56	+1.2
2,985,149	-		CA265_RS12060	0.60	-0.3
2,985,157	-		CA265_RS12060	0.60	+0.2
2,985,264	+		CA265_RS12060	0.64	-0.2
2,985,357	-		CA265_RS12060	0.67	+0.9
2,985,397	-		CA265_RS12060	0.68	-0.7
2,985,459	+		CA265_RS12060	0.70	-0.8
2,985,509	+		CA265_RS12060	0.72	-0.1
2,985,514	-		CA265_RS12060	0.72	-0.3
2,985,528	+		CA265_RS12060	0.73	+0.5
2,985,535	-		CA265_RS12060	0.73	-1.9
2,985,535	-		CA265_RS12060	0.73	+0.0
2,985,564	+		CA265_RS12060	0.74	-0.6
2,985,577	-		CA265_RS12060	0.74	+0.6
2,985,621	-		CA265_RS12060	0.76	+2.2
2,985,642	-		CA265_RS12060	0.77	+1.0
2,985,648	+		CA265_RS12060	0.77	-1.3
2,985,674	+		CA265_RS12060	0.78	-0.2
2,985,753	+		CA265_RS12060	0.81	+0.5
2,985,917	+		CA265_RS12060	0.86	+0.7
2,985,917	+		CA265_RS12060	0.86	-0.2
2,985,953	-		CA265_RS12060	0.88	-0.2
2,985,993	-		CA265_RS12060	0.89	+0.5
2,985,993	-		CA265_RS12060	0.89	+0.7
2,986,004	+		CA265_RS12060	0.89	-0.2
2,986,006	+		CA265_RS12060	0.89	-2.0
2,986,007	-		CA265_RS12060	0.89	-1.2
2,986,007	-		CA265_RS12060	0.89	+0.0
2,986,016	-		CA265_RS12060	0.90	-0.0
2,986,122	-				+0.7
2,986,134	+				+0.3
2,986,146	-				+0.9
2,986,162	-				-1.6
2,986,169	+				+0.1
2,986,170	-				+0.2
2,986,247	+				+0.2
2,986,252	-				-0.2
2,986,260	+				-0.8
2,986,280	+				-1.8
2,986,281	-				-0.2
2,986,309	+				+0.1
2,986,379	+				-0.3
2,986,389	+				+2.2
2,986,417	+				+1.0
2,986,418	-				+0.9
2,986,418	-				+0.6
2,986,441	-				+0.2
2,986,458	+				+0.3
2,986,539	-				-1.5
2,986,539	-				-1.4
2,986,540	+				+0.3
2,986,540	+				+1.1
2,986,541	-				+1.1
2,986,541	-				+0.3
2,986,541	-				-1.8
2,986,551	-				-0.7
2,986,678	-		CA265_RS12065	0.16	+0.9
2,986,751	+		CA265_RS12065	0.20	+0.5
2,986,752	-		CA265_RS12065	0.20	-0.6
2,986,756	-		CA265_RS12065	0.21	+0.1
2,986,757	+		CA265_RS12065	0.21	+0.3
2,986,758	-		CA265_RS12065	0.21	-0.7
2,986,763	+		CA265_RS12065	0.21	-0.8
2,986,763	+		CA265_RS12065	0.21	+0.9
2,986,764	-		CA265_RS12065	0.21	-0.4
2,986,765	+		CA265_RS12065	0.21	-1.6
2,986,815	+		CA265_RS12065	0.24	+0.1
2,986,839	+		CA265_RS12065	0.26	-0.6
2,986,840	-		CA265_RS12065	0.26	-2.2
2,986,840	-		CA265_RS12065	0.26	-1.7
2,986,846	+		CA265_RS12065	0.26	-0.1
2,986,893	-		CA265_RS12065	0.29	+0.7
2,986,920	-		CA265_RS12065	0.31	-0.5
2,986,922	-		CA265_RS12065	0.31	-1.5
2,986,924	+		CA265_RS12065	0.31	-0.6
2,986,979	+		CA265_RS12065	0.34	-0.4
2,987,003	+		CA265_RS12065	0.36	+0.4
2,987,003	+		CA265_RS12065	0.36	+0.9
2,987,006	-		CA265_RS12065	0.36	+1.6
2,987,011	+		CA265_RS12065	0.36	-1.0
2,987,012	-		CA265_RS12065	0.36	-0.2
2,987,031	-		CA265_RS12065	0.37	+0.4
2,987,039	-		CA265_RS12065	0.38	-0.0
2,987,099	+		CA265_RS12065	0.41	+0.7
2,987,104	-		CA265_RS12065	0.42	-0.4
2,987,125	+		CA265_RS12065	0.43	-0.7
2,987,147	+		CA265_RS12065	0.44	+0.5
2,987,190	+		CA265_RS12065	0.47	-0.7
2,987,207	+		CA265_RS12065	0.48	+0.4
2,987,207	+		CA265_RS12065	0.48	+0.6
2,987,241	-		CA265_RS12065	0.50	+0.4