Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS07185

Experiment: L-Valine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (N)
1,799,876	-		CA265_RS07180	0.65	-0.8
1,799,895	+		CA265_RS07180	0.65	-0.1
1,799,896	-		CA265_RS07180	0.65	-0.4
1,799,899	+		CA265_RS07180	0.66	+1.2
1,799,900	-		CA265_RS07180	0.66	+1.2
1,799,935	+		CA265_RS07180	0.67	-0.8
1,800,025	-		CA265_RS07180	0.71	+0.6
1,800,059	-		CA265_RS07180	0.73	+0.3
1,800,076	-		CA265_RS07180	0.74	+0.7
1,800,113	+		CA265_RS07180	0.75	-1.5
1,800,185	+		CA265_RS07180	0.79	+0.8
1,800,186	-		CA265_RS07180	0.79	+0.0
1,800,186	-		CA265_RS07180	0.79	-1.5
1,800,253	-		CA265_RS07180	0.82	-0.4
1,800,253	-		CA265_RS07180	0.82	-1.6
1,800,300	-		CA265_RS07180	0.84	+1.0
1,800,317	-		CA265_RS07180	0.84	-1.2
1,800,394	+		CA265_RS07180	0.88	-0.1
1,800,395	-		CA265_RS07180	0.88	+1.2
1,800,436	+		CA265_RS07180	0.90	-1.1
1,800,450	+				-1.2
1,800,490	-				+0.4
1,800,557	-				-0.3
1,800,626	-				-0.0
1,800,660	-				-0.8
1,800,660	-				+0.1
1,800,830	+				-0.3
1,800,831	-				-0.0
1,800,853	-				-0.8
1,800,853	-				+0.0
1,800,870	+				+0.3
1,800,873	+				+0.3
1,800,873	+				+0.6
1,800,901	-				-1.0
1,800,909	-				-0.4
1,801,004	-				-0.8
1,801,072	+				-0.4
1,801,103	-		CA265_RS07185	0.10	+0.2
1,801,109	-		CA265_RS07185	0.10	-0.0
1,801,146	-		CA265_RS07185	0.12	+1.4
1,801,156	+		CA265_RS07185	0.12	-0.0
1,801,180	+		CA265_RS07185	0.13	-0.0
1,801,190	+		CA265_RS07185	0.13	-0.8
1,801,231	+		CA265_RS07185	0.15	-1.1
1,801,279	+		CA265_RS07185	0.17	+0.8
1,801,323	-		CA265_RS07185	0.18	+0.2
1,801,333	-		CA265_RS07185	0.19	-0.3
1,801,434	+		CA265_RS07185	0.23	-0.3
1,801,434	+		CA265_RS07185	0.23	-0.6
1,801,435	-		CA265_RS07185	0.23	+0.1
1,801,441	-		CA265_RS07185	0.23	+0.2
1,801,457	-		CA265_RS07185	0.23	-0.3
1,801,612	-		CA265_RS07185	0.29	+0.4
1,801,631	+		CA265_RS07185	0.30	+0.5
1,801,631	+		CA265_RS07185	0.30	-0.0
1,801,631	+		CA265_RS07185	0.30	+0.0
1,801,667	-		CA265_RS07185	0.31	+0.7
1,801,797	-		CA265_RS07185	0.36	-0.1
1,801,816	+		CA265_RS07185	0.37	-2.2
1,802,030	-		CA265_RS07185	0.45	+1.0
1,802,053	+		CA265_RS07185	0.46	+0.0
1,802,054	-		CA265_RS07185	0.46	-0.3
1,802,069	+		CA265_RS07185	0.46	+1.2
1,802,069	+		CA265_RS07185	0.46	-0.1
1,802,070	-		CA265_RS07185	0.46	-0.4
1,802,071	+		CA265_RS07185	0.47	-0.7
1,802,071	+		CA265_RS07185	0.47	-0.5
1,802,071	+		CA265_RS07185	0.47	-2.0
1,802,072	-		CA265_RS07185	0.47	-0.1
1,802,072	-		CA265_RS07185	0.47	+0.9
1,802,072	-		CA265_RS07185	0.47	+0.6
1,802,072	-		CA265_RS07185	0.47	+1.0
1,802,072	-		CA265_RS07185	0.47	+0.4
1,802,072	-		CA265_RS07185	0.47	-0.1
1,802,072	-		CA265_RS07185	0.47	+0.2
1,802,198	+		CA265_RS07185	0.51	+0.4
1,802,199	-		CA265_RS07185	0.51	+0.2
1,802,319	+		CA265_RS07185	0.56	-0.4
1,802,353	-		CA265_RS07185	0.57	+0.0
1,802,359	+		CA265_RS07185	0.57	-0.0
1,802,359	+		CA265_RS07185	0.57	+1.4
1,802,360	-		CA265_RS07185	0.57	-0.0
1,802,442	+		CA265_RS07185	0.60	+1.2
1,802,443	-		CA265_RS07185	0.61	-0.7
1,802,447	+		CA265_RS07185	0.61	-1.8
1,802,447	+		CA265_RS07185	0.61	-0.0
1,802,447	+		CA265_RS07185	0.61	-0.1
1,802,614	+		CA265_RS07185	0.67	-0.1
1,802,615	-		CA265_RS07185	0.67	-0.9
1,802,637	-		CA265_RS07185	0.68	-0.1
1,802,637	-		CA265_RS07185	0.68	+0.2
1,802,637	-		CA265_RS07185	0.68	+0.6
1,802,656	+		CA265_RS07185	0.69	-0.2
1,802,753	-		CA265_RS07185	0.72	-0.3
1,802,788	-		CA265_RS07185	0.74	-2.2
1,802,793	+		CA265_RS07185	0.74	-1.4
1,802,923	+		CA265_RS07185	0.79	+0.4
1,802,934	-		CA265_RS07185	0.79	+0.2
1,802,981	+		CA265_RS07185	0.81	+0.3
1,803,066	-		CA265_RS07185	0.84	-0.8
1,803,160	+		CA265_RS07185	0.88	-0.2
1,803,194	+		CA265_RS07185	0.89	-0.4
1,803,195	-		CA265_RS07185	0.89	-0.3
1,803,256	+				+0.2
1,803,256	+				+0.6
1,803,257	-				-0.1
1,803,257	-				-0.3
1,803,261	+				+0.3
1,803,261	+				+0.1
1,803,265	+				-0.8
1,803,266	-				-0.9
1,803,285	+				+0.2
1,803,286	-				+0.1
1,803,327	+				+0.5
1,803,418	+				-2.5
1,803,423	+				-1.4
1,803,544	+				-0.0
1,803,602	+				+0.3
1,803,623	+		CA265_RS07190	0.10	+0.6
1,803,624	-		CA265_RS07190	0.10	-0.9
1,803,684	-		CA265_RS07190	0.15	+0.8
1,803,769	+		CA265_RS07190	0.23	-0.9
1,803,809	+		CA265_RS07190	0.26	+0.1
1,803,809	+		CA265_RS07190	0.26	-0.3
1,803,810	-		CA265_RS07190	0.26	+0.1
1,803,810	-		CA265_RS07190	0.26	+0.8
1,803,842	-		CA265_RS07190	0.29	+0.6
1,803,860	+		CA265_RS07190	0.30	+0.9
1,803,860	+		CA265_RS07190	0.30	+0.2
1,803,985	-		CA265_RS07190	0.41	+0.5
1,803,986	+		CA265_RS07190	0.41	+0.4
1,803,987	-		CA265_RS07190	0.41	+0.5
1,803,987	-		CA265_RS07190	0.41	+0.2
1,803,987	-		CA265_RS07190	0.41	-0.2
1,804,062	+		CA265_RS07190	0.47	-0.6
1,804,145	+		CA265_RS07190	0.55	-0.4
1,804,191	-		CA265_RS07190	0.58	-0.5
1,804,223	-		CA265_RS07190	0.61	-0.1
1,804,239	-		CA265_RS07190	0.62	-0.0
1,804,312	+		CA265_RS07190	0.69	-1.2
1,804,312	+		CA265_RS07190	0.69	-3.4
1,804,332	-		CA265_RS07190	0.70	+1.0
1,804,372	-		CA265_RS07190	0.74	-0.3
1,804,396	+		CA265_RS07190	0.76	-0.7
1,804,396	+		CA265_RS07190	0.76	-0.3
1,804,397	-		CA265_RS07190	0.76	+0.3