Experiment: L-Valine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS02370 and CA265_RS02375 are separated by 182 nucleotides CA265_RS02375 and CA265_RS02380 are separated by 191 nucleotides CA265_RS02380 and CA265_RS02385 are separated by 130 nucleotides CA265_RS02385 and CA265_RS02390 overlap by 1 nucleotides
CA265_RS02370: CA265_RS02370 - AraC family transcriptional regulator, at 591,040 to 591,903
_RS02370
CA265_RS02375: CA265_RS02375 - hypothetical protein, at 592,086 to 592,679
_RS02375
CA265_RS02380: CA265_RS02380 - hypothetical protein, at 592,871 to 593,050
_RS02380
CA265_RS02385: CA265_RS02385 - 30S ribosomal protein S6, at 593,181 to 593,537
_RS02385
CA265_RS02390: CA265_RS02390 - 30S ribosomal protein S18, at 593,537 to 593,800
_RS02390
Position (kb) 592
593 Strain fitness (log2 ratio) -2
-1
0
1
2 at 591.107 kb on - strand at 591.132 kb on + strand, within CA265_RS02370 at 591.228 kb on + strand, within CA265_RS02370 at 591.337 kb on + strand, within CA265_RS02370 at 591.354 kb on + strand, within CA265_RS02370 at 591.448 kb on + strand, within CA265_RS02370 at 591.449 kb on - strand, within CA265_RS02370 at 591.449 kb on - strand, within CA265_RS02370 at 591.578 kb on - strand, within CA265_RS02370 at 591.578 kb on - strand, within CA265_RS02370 at 591.578 kb on - strand, within CA265_RS02370 at 591.729 kb on - strand, within CA265_RS02370 at 591.732 kb on - strand, within CA265_RS02370 at 591.839 kb on - strand at 591.967 kb on + strand at 592.008 kb on + strand at 592.045 kb on - strand at 592.045 kb on - strand at 592.055 kb on + strand at 592.058 kb on - strand at 592.145 kb on - strand at 592.178 kb on - strand, within CA265_RS02375 at 592.217 kb on + strand, within CA265_RS02375 at 592.311 kb on + strand, within CA265_RS02375 at 592.349 kb on + strand, within CA265_RS02375 at 592.350 kb on - strand, within CA265_RS02375 at 592.380 kb on + strand, within CA265_RS02375 at 592.395 kb on - strand, within CA265_RS02375 at 592.443 kb on - strand, within CA265_RS02375 at 592.503 kb on - strand, within CA265_RS02375 at 592.559 kb on - strand, within CA265_RS02375 at 592.638 kb on + strand at 592.639 kb on - strand at 592.721 kb on - strand at 592.780 kb on - strand at 592.784 kb on + strand at 592.784 kb on + strand at 592.784 kb on + strand at 592.787 kb on + strand at 592.788 kb on - strand at 592.869 kb on - strand at 592.873 kb on - strand at 593.007 kb on - strand, within CA265_RS02380 at 593.069 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (N) remove 591,107 - -0.6 591,132 + CA265_RS02370 0.11 +0.2 591,228 + CA265_RS02370 0.22 +0.0 591,337 + CA265_RS02370 0.34 +0.9 591,354 + CA265_RS02370 0.36 +1.4 591,448 + CA265_RS02370 0.47 -0.6 591,449 - CA265_RS02370 0.47 +1.0 591,449 - CA265_RS02370 0.47 +1.0 591,578 - CA265_RS02370 0.62 +1.3 591,578 - CA265_RS02370 0.62 +1.7 591,578 - CA265_RS02370 0.62 +0.8 591,729 - CA265_RS02370 0.80 -0.3 591,732 - CA265_RS02370 0.80 +1.1 591,839 - +0.1 591,967 + +0.6 592,008 + -0.3 592,045 - +0.6 592,045 - -1.2 592,055 + +0.3 592,058 - -0.4 592,145 - +0.6 592,178 - CA265_RS02375 0.15 +1.2 592,217 + CA265_RS02375 0.22 -0.6 592,311 + CA265_RS02375 0.38 +0.7 592,349 + CA265_RS02375 0.44 +1.0 592,350 - CA265_RS02375 0.44 +1.1 592,380 + CA265_RS02375 0.49 +0.7 592,395 - CA265_RS02375 0.52 +0.7 592,443 - CA265_RS02375 0.60 +1.8 592,503 - CA265_RS02375 0.70 +0.8 592,559 - CA265_RS02375 0.80 +1.6 592,638 + +1.2 592,639 - +0.4 592,721 - +1.4 592,780 - +0.4 592,784 + -0.4 592,784 + -0.2 592,784 + -1.2 592,787 + +1.9 592,788 - -0.2 592,869 - +1.2 592,873 - +0.6 593,007 - CA265_RS02380 0.76 -1.0 593,069 - -1.9
Or see this region's nucleotide sequence