Experiment: L-Valine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS02185 and CA265_RS02190 are separated by 8 nucleotides CA265_RS02190 and CA265_RS02195 are separated by 1 nucleotides
CA265_RS02185: CA265_RS02185 - type I glyceraldehyde-3-phosphate dehydrogenase, at 553,349 to 554,347
_RS02185
CA265_RS02190: CA265_RS02190 - hypothetical protein, at 554,356 to 555,198
_RS02190
CA265_RS02195: CA265_RS02195 - 6-phosphofructokinase, at 555,200 to 556,186
_RS02195
Position (kb)
553
554
555 Strain fitness (log2 ratio)
-1
0
1
2 at 552.355 kb on + strand at 552.374 kb on - strand at 552.380 kb on + strand at 552.389 kb on - strand at 552.431 kb on - strand at 552.452 kb on - strand at 552.455 kb on - strand at 552.455 kb on - strand at 552.515 kb on - strand at 552.562 kb on + strand at 552.599 kb on - strand at 552.618 kb on - strand at 552.655 kb on + strand at 552.657 kb on + strand at 552.671 kb on - strand at 552.692 kb on - strand at 552.809 kb on + strand at 552.841 kb on - strand at 552.918 kb on - strand at 553.291 kb on + strand at 553.313 kb on - strand at 553.316 kb on - strand at 553.316 kb on - strand at 554.362 kb on - strand at 554.367 kb on - strand at 554.486 kb on - strand, within CA265_RS02190 at 554.650 kb on - strand, within CA265_RS02190 at 554.835 kb on - strand at 554.927 kb on - strand, within CA265_RS02190 at 555.118 kb on - strand at 555.121 kb on - strand at 555.202 kb on - strand at 555.202 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (N) remove 552,355 + +1.0 552,374 - +0.2 552,380 + -1.0 552,389 - -0.3 552,431 - -0.3 552,452 - -0.2 552,455 - -0.9 552,455 - -0.2 552,515 - +0.4 552,562 + +1.9 552,599 - +1.1 552,618 - -0.9 552,655 + -1.1 552,657 + -0.3 552,671 - +0.9 552,692 - -0.6 552,809 + +0.6 552,841 - +0.2 552,918 - -0.6 553,291 + -1.0 553,313 - -0.3 553,316 - -1.7 553,316 - +1.2 554,362 - -1.6 554,367 - +0.5 554,486 - CA265_RS02190 0.15 -0.2 554,650 - CA265_RS02190 0.35 +1.5 554,835 - +2.4 554,927 - CA265_RS02190 0.68 +0.3 555,118 - -0.2 555,121 - +0.1 555,202 - +1.3 555,202 - -1.0
Or see this region's nucleotide sequence