Experiment: L-Valine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS01655 and CA265_RS01660 overlap by 1 nucleotides CA265_RS01660 and CA265_RS01665 are separated by 127 nucleotides CA265_RS01665 and CA265_RS01670 overlap by 44 nucleotides CA265_RS01670 and CA265_RS01675 are separated by 4 nucleotides
CA265_RS01655: CA265_RS01655 - hypothetical protein, at 425,328 to 426,461
_RS01655
CA265_RS01660: CA265_RS01660 - hypothetical protein, at 426,461 to 427,315
_RS01660
CA265_RS01665: CA265_RS01665 - hypothetical protein, at 427,443 to 428,492
_RS01665
CA265_RS01670: CA265_RS01670 - hypothetical protein, at 428,449 to 429,117
_RS01670
CA265_RS01675: CA265_RS01675 - hypothetical protein, at 429,122 to 430,102
_RS01675
Position (kb) 427
428
429 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 426.456 kb on + strand at 426.462 kb on + strand at 426.462 kb on + strand at 426.492 kb on + strand at 426.644 kb on - strand, within CA265_RS01660 at 426.644 kb on - strand, within CA265_RS01660 at 426.699 kb on + strand, within CA265_RS01660 at 426.700 kb on - strand, within CA265_RS01660 at 426.700 kb on - strand, within CA265_RS01660 at 426.733 kb on - strand, within CA265_RS01660 at 426.749 kb on - strand, within CA265_RS01660 at 426.817 kb on + strand, within CA265_RS01660 at 426.817 kb on + strand, within CA265_RS01660 at 426.818 kb on - strand, within CA265_RS01660 at 426.855 kb on + strand, within CA265_RS01660 at 427.151 kb on - strand, within CA265_RS01660 at 427.211 kb on + strand, within CA265_RS01660 at 427.212 kb on - strand, within CA265_RS01660 at 427.229 kb on + strand, within CA265_RS01660 at 427.235 kb on + strand at 427.239 kb on - strand at 427.263 kb on + strand at 427.263 kb on + strand at 427.263 kb on + strand at 427.267 kb on + strand at 427.267 kb on + strand at 427.267 kb on + strand at 427.268 kb on - strand at 427.268 kb on - strand at 427.295 kb on + strand at 427.370 kb on - strand at 427.376 kb on - strand at 427.380 kb on - strand at 427.393 kb on - strand at 427.447 kb on + strand at 427.546 kb on - strand at 427.636 kb on + strand, within CA265_RS01665 at 427.641 kb on - strand, within CA265_RS01665 at 427.641 kb on - strand, within CA265_RS01665 at 427.641 kb on - strand, within CA265_RS01665 at 427.670 kb on + strand, within CA265_RS01665 at 427.670 kb on + strand, within CA265_RS01665 at 427.673 kb on - strand, within CA265_RS01665 at 427.675 kb on - strand, within CA265_RS01665 at 427.686 kb on + strand, within CA265_RS01665 at 427.687 kb on - strand, within CA265_RS01665 at 427.776 kb on - strand, within CA265_RS01665 at 427.822 kb on - strand, within CA265_RS01665 at 427.826 kb on - strand, within CA265_RS01665 at 427.836 kb on - strand, within CA265_RS01665 at 427.885 kb on + strand, within CA265_RS01665 at 427.960 kb on - strand, within CA265_RS01665 at 427.962 kb on + strand, within CA265_RS01665 at 427.979 kb on + strand, within CA265_RS01665 at 427.986 kb on - strand, within CA265_RS01665 at 427.986 kb on - strand, within CA265_RS01665 at 428.012 kb on + strand, within CA265_RS01665 at 428.018 kb on - strand, within CA265_RS01665 at 428.021 kb on - strand, within CA265_RS01665 at 428.038 kb on - strand, within CA265_RS01665 at 428.101 kb on - strand, within CA265_RS01665 at 428.114 kb on + strand, within CA265_RS01665 at 428.115 kb on - strand, within CA265_RS01665 at 428.157 kb on + strand, within CA265_RS01665 at 428.162 kb on + strand, within CA265_RS01665 at 428.178 kb on + strand, within CA265_RS01665 at 428.242 kb on + strand, within CA265_RS01665 at 428.242 kb on + strand, within CA265_RS01665 at 428.263 kb on + strand, within CA265_RS01665 at 428.268 kb on + strand, within CA265_RS01665 at 428.312 kb on - strand, within CA265_RS01665 at 428.333 kb on - strand, within CA265_RS01665 at 428.334 kb on + strand, within CA265_RS01665 at 428.367 kb on - strand, within CA265_RS01665 at 428.376 kb on + strand, within CA265_RS01665 at 428.377 kb on - strand, within CA265_RS01665 at 428.431 kb on - strand at 428.431 kb on - strand at 428.572 kb on - strand, within CA265_RS01670 at 428.680 kb on - strand, within CA265_RS01670 at 428.695 kb on + strand, within CA265_RS01670 at 428.701 kb on + strand, within CA265_RS01670 at 428.716 kb on - strand, within CA265_RS01670 at 428.744 kb on - strand, within CA265_RS01670 at 428.789 kb on - strand, within CA265_RS01670 at 428.872 kb on + strand, within CA265_RS01670 at 428.882 kb on + strand, within CA265_RS01670 at 428.883 kb on - strand, within CA265_RS01670 at 428.892 kb on + strand, within CA265_RS01670 at 428.895 kb on + strand, within CA265_RS01670 at 428.896 kb on - strand, within CA265_RS01670 at 428.896 kb on - strand, within CA265_RS01670 at 428.899 kb on + strand, within CA265_RS01670 at 428.920 kb on - strand, within CA265_RS01670 at 429.000 kb on + strand, within CA265_RS01670 at 429.001 kb on - strand, within CA265_RS01670 at 429.004 kb on + strand, within CA265_RS01670 at 429.004 kb on + strand, within CA265_RS01670 at 429.004 kb on + strand, within CA265_RS01670 at 429.004 kb on + strand, within CA265_RS01670 at 429.005 kb on - strand, within CA265_RS01670 at 429.006 kb on + strand, within CA265_RS01670 at 429.022 kb on + strand, within CA265_RS01670 at 429.098 kb on - strand at 429.118 kb on - strand at 429.156 kb on - strand at 429.159 kb on - strand at 429.170 kb on - strand at 429.192 kb on + strand at 429.224 kb on - strand, within CA265_RS01675 at 429.256 kb on + strand, within CA265_RS01675 at 429.378 kb on - strand, within CA265_RS01675 at 429.438 kb on + strand, within CA265_RS01675 at 429.438 kb on + strand, within CA265_RS01675 at 429.439 kb on - strand, within CA265_RS01675 at 429.439 kb on - strand, within CA265_RS01675 at 429.466 kb on + strand, within CA265_RS01675
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (N) remove 426,456 + +0.1 426,462 + +0.3 426,462 + -0.8 426,492 + -0.9 426,644 - CA265_RS01660 0.21 +0.1 426,644 - CA265_RS01660 0.21 -0.3 426,699 + CA265_RS01660 0.28 -1.5 426,700 - CA265_RS01660 0.28 +0.3 426,700 - CA265_RS01660 0.28 +0.6 426,733 - CA265_RS01660 0.32 -0.7 426,749 - CA265_RS01660 0.34 -1.9 426,817 + CA265_RS01660 0.42 -1.0 426,817 + CA265_RS01660 0.42 -2.5 426,818 - CA265_RS01660 0.42 +0.9 426,855 + CA265_RS01660 0.46 -0.6 427,151 - CA265_RS01660 0.81 -0.8 427,211 + CA265_RS01660 0.88 -0.6 427,212 - CA265_RS01660 0.88 +0.4 427,229 + CA265_RS01660 0.90 -1.1 427,235 + +0.4 427,239 - +1.1 427,263 + -0.5 427,263 + -0.6 427,263 + +0.5 427,267 + -2.0 427,267 + -1.3 427,267 + +0.1 427,268 - +1.1 427,268 - -0.6 427,295 + -0.2 427,370 - -1.7 427,376 - -2.9 427,380 - -0.5 427,393 - +1.6 427,447 + -2.0 427,546 - +0.0 427,636 + CA265_RS01665 0.18 -0.2 427,641 - CA265_RS01665 0.19 +0.6 427,641 - CA265_RS01665 0.19 -0.5 427,641 - CA265_RS01665 0.19 -0.7 427,670 + CA265_RS01665 0.22 -0.1 427,670 + CA265_RS01665 0.22 -0.8 427,673 - CA265_RS01665 0.22 +1.8 427,675 - CA265_RS01665 0.22 +0.2 427,686 + CA265_RS01665 0.23 -0.4 427,687 - CA265_RS01665 0.23 +0.5 427,776 - CA265_RS01665 0.32 +2.3 427,822 - CA265_RS01665 0.36 -0.2 427,826 - CA265_RS01665 0.36 +0.2 427,836 - CA265_RS01665 0.37 +0.3 427,885 + CA265_RS01665 0.42 -1.9 427,960 - CA265_RS01665 0.49 +2.0 427,962 + CA265_RS01665 0.49 +0.6 427,979 + CA265_RS01665 0.51 -0.5 427,986 - CA265_RS01665 0.52 -1.3 427,986 - CA265_RS01665 0.52 -0.1 428,012 + CA265_RS01665 0.54 +0.4 428,018 - CA265_RS01665 0.55 -0.8 428,021 - CA265_RS01665 0.55 +1.2 428,038 - CA265_RS01665 0.57 -1.1 428,101 - CA265_RS01665 0.63 -0.8 428,114 + CA265_RS01665 0.64 +0.1 428,115 - CA265_RS01665 0.64 -1.7 428,157 + CA265_RS01665 0.68 -0.5 428,162 + CA265_RS01665 0.68 -0.4 428,178 + CA265_RS01665 0.70 -0.6 428,242 + CA265_RS01665 0.76 -0.8 428,242 + CA265_RS01665 0.76 -1.8 428,263 + CA265_RS01665 0.78 -0.6 428,268 + CA265_RS01665 0.79 +0.6 428,312 - CA265_RS01665 0.83 -0.9 428,333 - CA265_RS01665 0.85 -0.6 428,334 + CA265_RS01665 0.85 -0.9 428,367 - CA265_RS01665 0.88 +0.5 428,376 + CA265_RS01665 0.89 -0.1 428,377 - CA265_RS01665 0.89 -1.8 428,431 - -1.1 428,431 - +0.2 428,572 - CA265_RS01670 0.18 +2.6 428,680 - CA265_RS01670 0.35 +0.7 428,695 + CA265_RS01670 0.37 +0.3 428,701 + CA265_RS01670 0.38 -0.6 428,716 - CA265_RS01670 0.40 -0.2 428,744 - CA265_RS01670 0.44 -0.8 428,789 - CA265_RS01670 0.51 -1.5 428,872 + CA265_RS01670 0.63 +0.1 428,882 + CA265_RS01670 0.65 +0.8 428,883 - CA265_RS01670 0.65 -0.4 428,892 + CA265_RS01670 0.66 -0.8 428,895 + CA265_RS01670 0.67 +0.2 428,896 - CA265_RS01670 0.67 +0.6 428,896 - CA265_RS01670 0.67 -1.3 428,899 + CA265_RS01670 0.67 -1.0 428,920 - CA265_RS01670 0.70 -1.3 429,000 + CA265_RS01670 0.82 -0.0 429,001 - CA265_RS01670 0.83 -1.2 429,004 + CA265_RS01670 0.83 -0.8 429,004 + CA265_RS01670 0.83 -0.8 429,004 + CA265_RS01670 0.83 -1.0 429,004 + CA265_RS01670 0.83 +0.4 429,005 - CA265_RS01670 0.83 +0.2 429,006 + CA265_RS01670 0.83 +0.3 429,022 + CA265_RS01670 0.86 -1.8 429,098 - -0.8 429,118 - +0.6 429,156 - +0.2 429,159 - +0.1 429,170 - +0.4 429,192 + +0.9 429,224 - CA265_RS01675 0.10 -1.0 429,256 + CA265_RS01675 0.14 -1.4 429,378 - CA265_RS01675 0.26 -0.3 429,438 + CA265_RS01675 0.32 -0.4 429,438 + CA265_RS01675 0.32 +0.1 429,439 - CA265_RS01675 0.32 -1.9 429,439 - CA265_RS01675 0.32 +0.7 429,466 + CA265_RS01675 0.35 +1.6
Or see this region's nucleotide sequence