Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_21855 and AO356_21860 are separated by 182 nucleotides AO356_21860 and AO356_21865 are separated by 42 nucleotides AO356_21865 and AO356_21870 are separated by 43 nucleotides AO356_21870 and AO356_21875 are separated by 102 nucleotides
AO356_21855: AO356_21855 - glycine/betaine ABC transporter substrate-binding protein, at 4,893,427 to 4,894,326
_21855
AO356_21860: AO356_21860 - transcriptional regulator, at 4,894,509 to 4,895,153
_21860
AO356_21865: AO356_21865 - hypothetical protein, at 4,895,196 to 4,895,462
_21865
AO356_21870: AO356_21870 - hypothetical protein, at 4,895,506 to 4,896,312
_21870
AO356_21875: AO356_21875 - hypothetical protein, at 4,896,415 to 4,896,654
_21875
Position (kb) 4895
4896 Strain fitness (log2 ratio) -2
-1
0
1 at 4894.255 kb on + strand at 4894.256 kb on - strand at 4894.344 kb on + strand at 4894.344 kb on + strand at 4894.344 kb on + strand at 4894.344 kb on + strand at 4894.344 kb on + strand at 4894.455 kb on + strand at 4894.456 kb on - strand at 4894.616 kb on + strand, within AO356_21860 at 4894.616 kb on + strand, within AO356_21860 at 4894.616 kb on + strand, within AO356_21860 at 4894.638 kb on + strand, within AO356_21860 at 4894.639 kb on - strand, within AO356_21860 at 4894.722 kb on + strand, within AO356_21860 at 4894.989 kb on + strand, within AO356_21860 at 4894.990 kb on - strand, within AO356_21860 at 4894.990 kb on - strand, within AO356_21860 at 4894.990 kb on - strand, within AO356_21860 at 4895.029 kb on + strand, within AO356_21860 at 4895.029 kb on + strand, within AO356_21860 at 4895.029 kb on + strand, within AO356_21860 at 4895.029 kb on + strand, within AO356_21860 at 4895.030 kb on - strand, within AO356_21860 at 4895.030 kb on - strand, within AO356_21860 at 4895.030 kb on - strand, within AO356_21860 at 4895.030 kb on - strand, within AO356_21860 at 4895.030 kb on - strand, within AO356_21860 at 4895.066 kb on - strand, within AO356_21860 at 4895.066 kb on - strand, within AO356_21860 at 4895.171 kb on + strand at 4895.171 kb on + strand at 4895.171 kb on + strand at 4895.171 kb on + strand at 4895.171 kb on + strand at 4895.172 kb on - strand at 4895.172 kb on - strand at 4895.172 kb on - strand at 4895.172 kb on - strand at 4895.342 kb on + strand, within AO356_21865 at 4895.343 kb on - strand, within AO356_21865 at 4895.343 kb on - strand, within AO356_21865 at 4895.343 kb on - strand, within AO356_21865 at 4895.417 kb on + strand, within AO356_21865 at 4895.428 kb on + strand, within AO356_21865 at 4895.428 kb on + strand, within AO356_21865 at 4895.429 kb on - strand, within AO356_21865 at 4895.447 kb on + strand at 4895.447 kb on + strand at 4895.447 kb on + strand at 4895.447 kb on + strand at 4895.448 kb on - strand at 4895.448 kb on - strand at 4895.448 kb on - strand at 4895.448 kb on - strand at 4895.619 kb on + strand, within AO356_21870 at 4895.620 kb on - strand, within AO356_21870 at 4895.764 kb on + strand, within AO356_21870 at 4895.764 kb on + strand, within AO356_21870 at 4895.765 kb on - strand, within AO356_21870 at 4895.852 kb on + strand, within AO356_21870 at 4896.007 kb on + strand, within AO356_21870 at 4896.007 kb on + strand, within AO356_21870 at 4896.007 kb on + strand, within AO356_21870 at 4896.007 kb on + strand, within AO356_21870 at 4896.007 kb on + strand, within AO356_21870 at 4896.008 kb on - strand, within AO356_21870 at 4896.008 kb on - strand, within AO356_21870 at 4896.008 kb on - strand, within AO356_21870 at 4896.008 kb on - strand, within AO356_21870 at 4896.008 kb on - strand, within AO356_21870 at 4896.008 kb on - strand, within AO356_21870 at 4896.008 kb on - strand, within AO356_21870 at 4896.008 kb on - strand, within AO356_21870 at 4896.008 kb on - strand, within AO356_21870 at 4896.008 kb on - strand, within AO356_21870 at 4896.131 kb on + strand, within AO356_21870 at 4896.131 kb on + strand, within AO356_21870 at 4896.132 kb on - strand, within AO356_21870 at 4896.132 kb on - strand, within AO356_21870 at 4896.132 kb on - strand, within AO356_21870 at 4896.132 kb on - strand, within AO356_21870 at 4896.132 kb on - strand, within AO356_21870 at 4896.151 kb on + strand, within AO356_21870 at 4896.151 kb on + strand, within AO356_21870 at 4896.152 kb on - strand, within AO356_21870 at 4896.165 kb on + strand, within AO356_21870 at 4896.165 kb on + strand, within AO356_21870 at 4896.166 kb on - strand, within AO356_21870 at 4896.184 kb on + strand, within AO356_21870 at 4896.184 kb on + strand, within AO356_21870 at 4896.185 kb on - strand, within AO356_21870 at 4896.185 kb on - strand, within AO356_21870 at 4896.185 kb on - strand, within AO356_21870 at 4896.185 kb on - strand, within AO356_21870 at 4896.225 kb on - strand, within AO356_21870 at 4896.237 kb on - strand at 4896.237 kb on - strand at 4896.237 kb on - strand at 4896.237 kb on - strand at 4896.237 kb on - strand at 4896.237 kb on - strand at 4896.289 kb on + strand at 4896.289 kb on + strand at 4896.289 kb on + strand at 4896.290 kb on - strand at 4896.290 kb on - strand at 4896.388 kb on + strand at 4896.388 kb on + strand at 4896.388 kb on + strand at 4896.388 kb on + strand at 4896.388 kb on + strand at 4896.388 kb on + strand at 4896.388 kb on + strand at 4896.388 kb on + strand at 4896.389 kb on - strand at 4896.389 kb on - strand at 4896.389 kb on - strand at 4896.389 kb on - strand at 4896.389 kb on - strand at 4896.389 kb on - strand at 4896.389 kb on - strand at 4896.389 kb on - strand at 4896.389 kb on - strand at 4896.415 kb on - strand at 4896.415 kb on - strand at 4896.415 kb on - strand at 4896.425 kb on + strand at 4896.425 kb on + strand at 4896.425 kb on + strand at 4896.425 kb on + strand at 4896.425 kb on + strand at 4896.426 kb on - strand at 4896.426 kb on - strand at 4896.430 kb on + strand at 4896.430 kb on + strand at 4896.430 kb on + strand at 4896.430 kb on + strand at 4896.430 kb on + strand at 4896.430 kb on + strand at 4896.430 kb on + strand at 4896.431 kb on - strand at 4896.431 kb on - strand at 4896.431 kb on - strand at 4896.435 kb on + strand at 4896.435 kb on + strand at 4896.435 kb on + strand at 4896.435 kb on + strand at 4896.436 kb on - strand at 4896.436 kb on - strand at 4896.436 kb on - strand at 4896.441 kb on + strand, within AO356_21875 at 4896.441 kb on + strand, within AO356_21875 at 4896.441 kb on + strand, within AO356_21875 at 4896.441 kb on + strand, within AO356_21875 at 4896.441 kb on + strand, within AO356_21875 at 4896.441 kb on + strand, within AO356_21875 at 4896.441 kb on + strand, within AO356_21875 at 4896.442 kb on - strand, within AO356_21875 at 4896.442 kb on - strand, within AO356_21875 at 4896.442 kb on - strand, within AO356_21875
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 4,894,255 + -0.3 4,894,256 - +0.3 4,894,344 + -1.3 4,894,344 + -0.3 4,894,344 + -0.8 4,894,344 + -0.6 4,894,344 + -0.2 4,894,455 + +0.7 4,894,456 - +0.0 4,894,616 + AO356_21860 0.17 -0.3 4,894,616 + AO356_21860 0.17 +0.4 4,894,616 + AO356_21860 0.17 -0.7 4,894,638 + AO356_21860 0.20 -0.2 4,894,639 - AO356_21860 0.20 -0.5 4,894,722 + AO356_21860 0.33 +0.4 4,894,989 + AO356_21860 0.74 -1.6 4,894,990 - AO356_21860 0.75 +0.5 4,894,990 - AO356_21860 0.75 -2.2 4,894,990 - AO356_21860 0.75 +0.6 4,895,029 + AO356_21860 0.81 -0.2 4,895,029 + AO356_21860 0.81 +0.4 4,895,029 + AO356_21860 0.81 +0.4 4,895,029 + AO356_21860 0.81 +0.7 4,895,030 - AO356_21860 0.81 +1.2 4,895,030 - AO356_21860 0.81 +0.8 4,895,030 - AO356_21860 0.81 +0.5 4,895,030 - AO356_21860 0.81 +1.5 4,895,030 - AO356_21860 0.81 +0.3 4,895,066 - AO356_21860 0.86 -0.2 4,895,066 - AO356_21860 0.86 -0.0 4,895,171 + +0.2 4,895,171 + -0.2 4,895,171 + +1.4 4,895,171 + -1.2 4,895,171 + +0.5 4,895,172 - +0.1 4,895,172 - -0.1 4,895,172 - +0.3 4,895,172 - -0.2 4,895,342 + AO356_21865 0.55 +0.5 4,895,343 - AO356_21865 0.55 -1.4 4,895,343 - AO356_21865 0.55 +0.7 4,895,343 - AO356_21865 0.55 +1.2 4,895,417 + AO356_21865 0.83 -0.4 4,895,428 + AO356_21865 0.87 -0.4 4,895,428 + AO356_21865 0.87 +0.4 4,895,429 - AO356_21865 0.87 -0.4 4,895,447 + +1.5 4,895,447 + -0.2 4,895,447 + +0.1 4,895,447 + +1.2 4,895,448 - -0.4 4,895,448 - +1.2 4,895,448 - +0.4 4,895,448 - +0.3 4,895,619 + AO356_21870 0.14 -0.1 4,895,620 - AO356_21870 0.14 -0.3 4,895,764 + AO356_21870 0.32 +0.2 4,895,764 + AO356_21870 0.32 +1.4 4,895,765 - AO356_21870 0.32 +1.3 4,895,852 + AO356_21870 0.43 +0.2 4,896,007 + AO356_21870 0.62 +0.2 4,896,007 + AO356_21870 0.62 +0.1 4,896,007 + AO356_21870 0.62 -0.2 4,896,007 + AO356_21870 0.62 -0.2 4,896,007 + AO356_21870 0.62 -1.3 4,896,008 - AO356_21870 0.62 +0.2 4,896,008 - AO356_21870 0.62 +0.3 4,896,008 - AO356_21870 0.62 -0.3 4,896,008 - AO356_21870 0.62 -0.8 4,896,008 - AO356_21870 0.62 +0.5 4,896,008 - AO356_21870 0.62 -1.1 4,896,008 - AO356_21870 0.62 -0.6 4,896,008 - AO356_21870 0.62 +0.5 4,896,008 - AO356_21870 0.62 -1.0 4,896,008 - AO356_21870 0.62 +0.5 4,896,131 + AO356_21870 0.77 -0.6 4,896,131 + AO356_21870 0.77 +0.0 4,896,132 - AO356_21870 0.78 +0.6 4,896,132 - AO356_21870 0.78 -0.7 4,896,132 - AO356_21870 0.78 -0.2 4,896,132 - AO356_21870 0.78 +0.5 4,896,132 - AO356_21870 0.78 -1.4 4,896,151 + AO356_21870 0.80 +0.2 4,896,151 + AO356_21870 0.80 +0.3 4,896,152 - AO356_21870 0.80 -0.2 4,896,165 + AO356_21870 0.82 +0.2 4,896,165 + AO356_21870 0.82 +0.5 4,896,166 - AO356_21870 0.82 -0.3 4,896,184 + AO356_21870 0.84 +0.3 4,896,184 + AO356_21870 0.84 +0.3 4,896,185 - AO356_21870 0.84 -0.0 4,896,185 - AO356_21870 0.84 -0.3 4,896,185 - AO356_21870 0.84 -0.8 4,896,185 - AO356_21870 0.84 +0.1 4,896,225 - AO356_21870 0.89 +0.3 4,896,237 - +0.9 4,896,237 - +0.3 4,896,237 - -1.4 4,896,237 - +0.6 4,896,237 - -0.1 4,896,237 - +1.1 4,896,289 + +1.0 4,896,289 + +0.4 4,896,289 + +0.5 4,896,290 - +0.0 4,896,290 - +0.3 4,896,388 + -2.4 4,896,388 + -0.0 4,896,388 + -0.3 4,896,388 + +0.7 4,896,388 + -1.1 4,896,388 + +0.8 4,896,388 + -1.0 4,896,388 + -0.6 4,896,389 - -1.6 4,896,389 - +0.9 4,896,389 - +0.1 4,896,389 - +0.4 4,896,389 - +1.0 4,896,389 - -0.1 4,896,389 - +0.5 4,896,389 - +0.2 4,896,389 - -0.0 4,896,415 - +0.2 4,896,415 - +0.9 4,896,415 - -1.5 4,896,425 + +0.8 4,896,425 + +0.5 4,896,425 + -0.2 4,896,425 + +0.5 4,896,425 + +0.1 4,896,426 - -0.7 4,896,426 - -0.2 4,896,430 + -0.3 4,896,430 + -0.2 4,896,430 + -0.5 4,896,430 + +0.7 4,896,430 + +0.9 4,896,430 + -1.4 4,896,430 + -0.1 4,896,431 - +0.1 4,896,431 - +0.7 4,896,431 - -0.4 4,896,435 + +0.4 4,896,435 + -0.9 4,896,435 + -0.1 4,896,435 + -0.7 4,896,436 - -0.0 4,896,436 - +0.5 4,896,436 - -1.0 4,896,441 + AO356_21875 0.11 +0.4 4,896,441 + AO356_21875 0.11 +0.9 4,896,441 + AO356_21875 0.11 +0.2 4,896,441 + AO356_21875 0.11 -0.4 4,896,441 + AO356_21875 0.11 +0.0 4,896,441 + AO356_21875 0.11 +1.0 4,896,441 + AO356_21875 0.11 -0.3 4,896,442 - AO356_21875 0.11 +0.4 4,896,442 - AO356_21875 0.11 +0.3 4,896,442 - AO356_21875 0.11 -0.0
Or see this region's nucleotide sequence