Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_19150 and AO356_19155 overlap by 8 nucleotides AO356_19155 and AO356_19160 overlap by 4 nucleotides AO356_19160 and AO356_19165 are separated by 151 nucleotides AO356_19165 and AO356_19170 overlap by 4 nucleotides
AO356_19150: AO356_19150 - cobalamin biosynthesis protein CobD, at 4,300,442 to 4,301,350
_19150
AO356_19155: AO356_19155 - threonine-phosphate decarboxylase, at 4,301,343 to 4,302,335
_19155
AO356_19160: AO356_19160 - cobyric acid synthase, at 4,302,332 to 4,303,783
_19160
AO356_19165: AO356_19165 - adenosylcobinamide kinase, at 4,303,935 to 4,304,456
_19165
AO356_19170: AO356_19170 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, at 4,304,453 to 4,305,508
_19170
Position (kb)
4302
4303
4304 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4301.342 kb on + strand at 4301.342 kb on + strand at 4301.342 kb on + strand at 4301.342 kb on + strand at 4301.342 kb on + strand at 4301.342 kb on + strand at 4301.342 kb on + strand at 4301.342 kb on + strand at 4301.342 kb on + strand at 4301.343 kb on - strand at 4301.343 kb on - strand at 4301.343 kb on - strand at 4301.343 kb on - strand at 4301.343 kb on - strand at 4301.343 kb on - strand at 4301.524 kb on - strand, within AO356_19155 at 4301.526 kb on + strand, within AO356_19155 at 4301.526 kb on + strand, within AO356_19155 at 4301.527 kb on - strand, within AO356_19155 at 4301.527 kb on - strand, within AO356_19155 at 4301.527 kb on - strand, within AO356_19155 at 4301.664 kb on + strand, within AO356_19155 at 4301.664 kb on + strand, within AO356_19155 at 4301.665 kb on - strand, within AO356_19155 at 4301.665 kb on - strand, within AO356_19155 at 4301.665 kb on - strand, within AO356_19155 at 4301.665 kb on - strand, within AO356_19155 at 4301.665 kb on - strand, within AO356_19155 at 4301.666 kb on + strand, within AO356_19155 at 4301.667 kb on - strand, within AO356_19155 at 4301.667 kb on - strand, within AO356_19155 at 4301.874 kb on + strand, within AO356_19155 at 4301.874 kb on + strand, within AO356_19155 at 4301.875 kb on - strand, within AO356_19155 at 4301.953 kb on + strand, within AO356_19155 at 4301.953 kb on + strand, within AO356_19155 at 4301.953 kb on + strand, within AO356_19155 at 4301.953 kb on + strand, within AO356_19155 at 4301.953 kb on + strand, within AO356_19155 at 4301.954 kb on - strand, within AO356_19155 at 4301.954 kb on - strand, within AO356_19155 at 4301.954 kb on - strand, within AO356_19155 at 4302.379 kb on + strand at 4302.638 kb on + strand, within AO356_19160 at 4302.638 kb on + strand, within AO356_19160 at 4302.638 kb on + strand, within AO356_19160 at 4302.639 kb on - strand, within AO356_19160 at 4302.647 kb on + strand, within AO356_19160 at 4302.647 kb on + strand, within AO356_19160 at 4302.647 kb on + strand, within AO356_19160 at 4302.647 kb on + strand, within AO356_19160 at 4302.647 kb on + strand, within AO356_19160 at 4302.648 kb on - strand, within AO356_19160 at 4302.704 kb on + strand, within AO356_19160 at 4302.704 kb on + strand, within AO356_19160 at 4302.705 kb on - strand, within AO356_19160 at 4302.705 kb on - strand, within AO356_19160 at 4302.705 kb on - strand, within AO356_19160 at 4303.004 kb on + strand, within AO356_19160 at 4303.005 kb on - strand, within AO356_19160 at 4303.245 kb on - strand, within AO356_19160 at 4303.293 kb on - strand, within AO356_19160 at 4303.604 kb on + strand, within AO356_19160 at 4303.604 kb on + strand, within AO356_19160 at 4303.604 kb on + strand, within AO356_19160 at 4303.604 kb on + strand, within AO356_19160 at 4303.604 kb on + strand, within AO356_19160 at 4303.605 kb on - strand, within AO356_19160 at 4303.688 kb on + strand at 4303.781 kb on + strand at 4303.782 kb on - strand at 4303.782 kb on - strand at 4303.851 kb on + strand at 4303.851 kb on + strand at 4303.851 kb on + strand at 4303.855 kb on + strand at 4303.855 kb on + strand at 4303.855 kb on + strand at 4303.855 kb on + strand at 4303.855 kb on + strand at 4303.856 kb on - strand at 4303.856 kb on - strand at 4303.856 kb on - strand at 4303.919 kb on + strand at 4303.919 kb on + strand at 4303.919 kb on + strand at 4303.919 kb on + strand at 4303.971 kb on - strand at 4304.022 kb on + strand, within AO356_19165 at 4304.022 kb on + strand, within AO356_19165 at 4304.022 kb on + strand, within AO356_19165 at 4304.022 kb on + strand, within AO356_19165 at 4304.022 kb on + strand, within AO356_19165 at 4304.023 kb on - strand, within AO356_19165 at 4304.023 kb on - strand, within AO356_19165 at 4304.023 kb on - strand, within AO356_19165 at 4304.445 kb on - strand at 4304.445 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 4,301,342 + -0.4 4,301,342 + -1.2 4,301,342 + -0.3 4,301,342 + +0.2 4,301,342 + -0.8 4,301,342 + -0.4 4,301,342 + +0.2 4,301,342 + +0.3 4,301,342 + +0.8 4,301,343 - -0.8 4,301,343 - -0.2 4,301,343 - +0.4 4,301,343 - -1.8 4,301,343 - -0.9 4,301,343 - -0.3 4,301,524 - AO356_19155 0.18 -1.6 4,301,526 + AO356_19155 0.18 -1.3 4,301,526 + AO356_19155 0.18 -0.7 4,301,527 - AO356_19155 0.19 -3.3 4,301,527 - AO356_19155 0.19 -0.8 4,301,527 - AO356_19155 0.19 -0.6 4,301,664 + AO356_19155 0.32 -0.2 4,301,664 + AO356_19155 0.32 -0.1 4,301,665 - AO356_19155 0.32 -0.6 4,301,665 - AO356_19155 0.32 -0.9 4,301,665 - AO356_19155 0.32 -0.5 4,301,665 - AO356_19155 0.32 -0.2 4,301,665 - AO356_19155 0.32 -0.6 4,301,666 + AO356_19155 0.33 -0.2 4,301,667 - AO356_19155 0.33 +0.3 4,301,667 - AO356_19155 0.33 -1.2 4,301,874 + AO356_19155 0.53 +0.1 4,301,874 + AO356_19155 0.53 -0.7 4,301,875 - AO356_19155 0.54 -0.6 4,301,953 + AO356_19155 0.61 -0.7 4,301,953 + AO356_19155 0.61 -0.2 4,301,953 + AO356_19155 0.61 -1.1 4,301,953 + AO356_19155 0.61 -0.7 4,301,953 + AO356_19155 0.61 +0.0 4,301,954 - AO356_19155 0.62 -1.6 4,301,954 - AO356_19155 0.62 +0.8 4,301,954 - AO356_19155 0.62 +0.6 4,302,379 + +0.0 4,302,638 + AO356_19160 0.21 -0.2 4,302,638 + AO356_19160 0.21 -0.2 4,302,638 + AO356_19160 0.21 -0.8 4,302,639 - AO356_19160 0.21 -1.2 4,302,647 + AO356_19160 0.22 +0.5 4,302,647 + AO356_19160 0.22 -1.0 4,302,647 + AO356_19160 0.22 -0.6 4,302,647 + AO356_19160 0.22 -2.8 4,302,647 + AO356_19160 0.22 -1.7 4,302,648 - AO356_19160 0.22 -1.0 4,302,704 + AO356_19160 0.26 -0.5 4,302,704 + AO356_19160 0.26 +0.2 4,302,705 - AO356_19160 0.26 -0.8 4,302,705 - AO356_19160 0.26 +0.6 4,302,705 - AO356_19160 0.26 -1.8 4,303,004 + AO356_19160 0.46 +0.0 4,303,005 - AO356_19160 0.46 +0.4 4,303,245 - AO356_19160 0.63 -0.9 4,303,293 - AO356_19160 0.66 -1.2 4,303,604 + AO356_19160 0.88 -0.7 4,303,604 + AO356_19160 0.88 +0.4 4,303,604 + AO356_19160 0.88 -1.4 4,303,604 + AO356_19160 0.88 -0.2 4,303,604 + AO356_19160 0.88 -0.6 4,303,605 - AO356_19160 0.88 -1.1 4,303,688 + +0.0 4,303,781 + -0.2 4,303,782 - +0.9 4,303,782 - -1.8 4,303,851 + -0.6 4,303,851 + +0.3 4,303,851 + -0.5 4,303,855 + +0.1 4,303,855 + +0.6 4,303,855 + +1.0 4,303,855 + +0.5 4,303,855 + +0.3 4,303,856 - -0.8 4,303,856 - -0.2 4,303,856 - +0.0 4,303,919 + -0.1 4,303,919 + -0.5 4,303,919 + +0.5 4,303,919 + +0.0 4,303,971 - -0.6 4,304,022 + AO356_19165 0.17 +0.0 4,304,022 + AO356_19165 0.17 -0.6 4,304,022 + AO356_19165 0.17 -1.2 4,304,022 + AO356_19165 0.17 -0.4 4,304,022 + AO356_19165 0.17 -0.3 4,304,023 - AO356_19165 0.17 +0.4 4,304,023 - AO356_19165 0.17 -0.1 4,304,023 - AO356_19165 0.17 -1.2 4,304,445 - -0.9 4,304,445 - -1.4
Or see this region's nucleotide sequence