Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_07495

Experiment: Tween 20 (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_07490 and AO356_07495 are separated by 9 nucleotidesAO356_07495 and AO356_07500 are separated by 322 nucleotides AO356_07490: AO356_07490 - 4-hydroxy-tetrahydrodipicolinate reductase, at 1,658,293 to 1,659,099 _07490 AO356_07495: AO356_07495 - molecular chaperone DnaJ, at 1,659,109 to 1,660,233 _07495 AO356_07500: AO356_07500 - molecular chaperone DnaK, at 1,660,556 to 1,662,472 _07500 Position (kb) 1659 1660 1661Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1658.133 kb on - strandat 1658.168 kb on - strandat 1658.250 kb on + strandat 1658.250 kb on + strandat 1658.251 kb on - strandat 1658.265 kb on + strandat 1658.265 kb on + strandat 1658.265 kb on + strandat 1658.266 kb on - strandat 1658.266 kb on - strandat 1658.266 kb on - strandat 1658.266 kb on - strandat 1658.266 kb on - strandat 1658.266 kb on - strandat 1658.266 kb on - strandat 1658.266 kb on - strandat 1658.266 kb on - strandat 1658.266 kb on - strandat 1658.266 kb on - strandat 1659.111 kb on - strandat 1659.495 kb on - strand, within AO356_07495at 1659.495 kb on - strand, within AO356_07495at 1659.495 kb on - strand, within AO356_07495at 1659.495 kb on - strand, within AO356_07495at 1659.495 kb on - strand, within AO356_07495at 1659.495 kb on - strand, within AO356_07495at 1659.495 kb on - strand, within AO356_07495at 1659.495 kb on - strand, within AO356_07495at 1659.495 kb on - strand, within AO356_07495at 1659.495 kb on - strand, within AO356_07495at 1660.074 kb on - strand, within AO356_07495at 1660.208 kb on - strandat 1660.250 kb on - strandat 1660.250 kb on - strandat 1660.250 kb on - strandat 1660.252 kb on - strandat 1660.252 kb on - strandat 1660.252 kb on - strandat 1660.252 kb on - strandat 1660.304 kb on - strandat 1660.349 kb on - strandat 1660.349 kb on - strandat 1660.353 kb on - strandat 1660.451 kb on - strandat 1660.511 kb on - strandat 1660.558 kb on - strandat 1660.558 kb on - strandat 1660.666 kb on - strandat 1660.666 kb on - strandat 1660.666 kb on - strandat 1660.666 kb on - strandat 1660.666 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C)
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1,658,133 - -1.9
1,658,168 - +0.0
1,658,250 + -1.4
1,658,250 + -3.1
1,658,251 - +0.3
1,658,265 + -1.0
1,658,265 + -0.2
1,658,265 + -2.6
1,658,266 - +1.2
1,658,266 - -0.1
1,658,266 - +0.5
1,658,266 - +0.9
1,658,266 - +0.0
1,658,266 - +1.9
1,658,266 - +0.7
1,658,266 - +0.3
1,658,266 - +0.6
1,658,266 - +0.2
1,658,266 - +0.3
1,659,111 - -0.4
1,659,495 - AO356_07495 0.34 -2.0
1,659,495 - AO356_07495 0.34 -0.3
1,659,495 - AO356_07495 0.34 -2.0
1,659,495 - AO356_07495 0.34 -1.1
1,659,495 - AO356_07495 0.34 -1.4
1,659,495 - AO356_07495 0.34 -0.5
1,659,495 - AO356_07495 0.34 -0.2
1,659,495 - AO356_07495 0.34 -1.4
1,659,495 - AO356_07495 0.34 -0.1
1,659,495 - AO356_07495 0.34 +0.9
1,660,074 - AO356_07495 0.86 +0.0
1,660,208 - -1.5
1,660,250 - +0.4
1,660,250 - +1.2
1,660,250 - +0.6
1,660,252 - +1.4
1,660,252 - +1.4
1,660,252 - +0.7
1,660,252 - +0.2
1,660,304 - -0.5
1,660,349 - +0.4
1,660,349 - +1.0
1,660,353 - -0.3
1,660,451 - +0.6
1,660,511 - +0.6
1,660,558 - -2.5
1,660,558 - -0.4
1,660,666 - -3.0
1,660,666 - +0.2
1,660,666 - +0.8
1,660,666 - -0.4
1,660,666 - +0.3

Or see this region's nucleotide sequence