Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07490 and AO356_07495 are separated by 9 nucleotides AO356_07495 and AO356_07500 are separated by 322 nucleotides
AO356_07490: AO356_07490 - 4-hydroxy-tetrahydrodipicolinate reductase, at 1,658,293 to 1,659,099
_07490
AO356_07495: AO356_07495 - molecular chaperone DnaJ, at 1,659,109 to 1,660,233
_07495
AO356_07500: AO356_07500 - molecular chaperone DnaK, at 1,660,556 to 1,662,472
_07500
Position (kb)
1659
1660
1661 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1658.133 kb on - strand at 1658.168 kb on - strand at 1658.250 kb on + strand at 1658.250 kb on + strand at 1658.251 kb on - strand at 1658.265 kb on + strand at 1658.265 kb on + strand at 1658.265 kb on + strand at 1658.266 kb on - strand at 1658.266 kb on - strand at 1658.266 kb on - strand at 1658.266 kb on - strand at 1658.266 kb on - strand at 1658.266 kb on - strand at 1658.266 kb on - strand at 1658.266 kb on - strand at 1658.266 kb on - strand at 1658.266 kb on - strand at 1658.266 kb on - strand at 1659.111 kb on - strand at 1659.495 kb on - strand, within AO356_07495 at 1659.495 kb on - strand, within AO356_07495 at 1659.495 kb on - strand, within AO356_07495 at 1659.495 kb on - strand, within AO356_07495 at 1659.495 kb on - strand, within AO356_07495 at 1659.495 kb on - strand, within AO356_07495 at 1659.495 kb on - strand, within AO356_07495 at 1659.495 kb on - strand, within AO356_07495 at 1659.495 kb on - strand, within AO356_07495 at 1659.495 kb on - strand, within AO356_07495 at 1660.074 kb on - strand, within AO356_07495 at 1660.208 kb on - strand at 1660.250 kb on - strand at 1660.250 kb on - strand at 1660.250 kb on - strand at 1660.252 kb on - strand at 1660.252 kb on - strand at 1660.252 kb on - strand at 1660.252 kb on - strand at 1660.304 kb on - strand at 1660.349 kb on - strand at 1660.349 kb on - strand at 1660.353 kb on - strand at 1660.451 kb on - strand at 1660.511 kb on - strand at 1660.558 kb on - strand at 1660.558 kb on - strand at 1660.666 kb on - strand at 1660.666 kb on - strand at 1660.666 kb on - strand at 1660.666 kb on - strand at 1660.666 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 1,658,133 - -1.9 1,658,168 - +0.0 1,658,250 + -1.4 1,658,250 + -3.1 1,658,251 - +0.3 1,658,265 + -1.0 1,658,265 + -0.2 1,658,265 + -2.6 1,658,266 - +1.2 1,658,266 - -0.1 1,658,266 - +0.5 1,658,266 - +0.9 1,658,266 - +0.0 1,658,266 - +1.9 1,658,266 - +0.7 1,658,266 - +0.3 1,658,266 - +0.6 1,658,266 - +0.2 1,658,266 - +0.3 1,659,111 - -0.4 1,659,495 - AO356_07495 0.34 -2.0 1,659,495 - AO356_07495 0.34 -0.3 1,659,495 - AO356_07495 0.34 -2.0 1,659,495 - AO356_07495 0.34 -1.1 1,659,495 - AO356_07495 0.34 -1.4 1,659,495 - AO356_07495 0.34 -0.5 1,659,495 - AO356_07495 0.34 -0.2 1,659,495 - AO356_07495 0.34 -1.4 1,659,495 - AO356_07495 0.34 -0.1 1,659,495 - AO356_07495 0.34 +0.9 1,660,074 - AO356_07495 0.86 +0.0 1,660,208 - -1.5 1,660,250 - +0.4 1,660,250 - +1.2 1,660,250 - +0.6 1,660,252 - +1.4 1,660,252 - +1.4 1,660,252 - +0.7 1,660,252 - +0.2 1,660,304 - -0.5 1,660,349 - +0.4 1,660,349 - +1.0 1,660,353 - -0.3 1,660,451 - +0.6 1,660,511 - +0.6 1,660,558 - -2.5 1,660,558 - -0.4 1,660,666 - -3.0 1,660,666 - +0.2 1,660,666 - +0.8 1,660,666 - -0.4 1,660,666 - +0.3
Or see this region's nucleotide sequence