Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07185 and AO356_07190 are separated by 294 nucleotides AO356_07190 and AO356_07195 are separated by 283 nucleotides AO356_07195 and AO356_07200 are separated by 277 nucleotides
AO356_07185: AO356_07185 - 5-dehydro-4-deoxyglucarate dehydratase, at 1,584,903 to 1,585,814
_07185
AO356_07190: AO356_07190 - hypothetical protein, at 1,586,109 to 1,586,492
_07190
AO356_07195: AO356_07195 - GntR family transcriptional regulator, at 1,586,776 to 1,587,522
_07195
AO356_07200: AO356_07200 - ABC transporter ATP-binding protein, at 1,587,800 to 1,589,527
_07200
Position (kb)
1586
1587
1588 Strain fitness (log2 ratio)
-2
-1
0
1 at 1585.815 kb on + strand at 1585.816 kb on - strand at 1585.898 kb on - strand at 1586.051 kb on + strand at 1586.051 kb on + strand at 1586.051 kb on + strand at 1586.051 kb on + strand at 1586.051 kb on + strand at 1586.051 kb on + strand at 1586.052 kb on - strand at 1586.052 kb on - strand at 1586.052 kb on - strand at 1586.052 kb on - strand at 1586.052 kb on - strand at 1586.052 kb on - strand at 1586.052 kb on - strand at 1586.052 kb on - strand at 1586.052 kb on - strand at 1586.055 kb on + strand at 1586.055 kb on + strand at 1586.056 kb on - strand at 1586.071 kb on + strand at 1586.071 kb on + strand at 1586.071 kb on + strand at 1586.071 kb on + strand at 1586.071 kb on + strand at 1586.072 kb on - strand at 1586.394 kb on + strand, within AO356_07190 at 1586.394 kb on + strand, within AO356_07190 at 1586.394 kb on + strand, within AO356_07190 at 1586.395 kb on - strand, within AO356_07190 at 1586.445 kb on + strand, within AO356_07190 at 1586.445 kb on + strand, within AO356_07190 at 1586.454 kb on + strand at 1586.455 kb on - strand at 1586.455 kb on - strand at 1586.455 kb on - strand at 1586.490 kb on + strand at 1586.620 kb on - strand at 1586.637 kb on + strand at 1586.637 kb on + strand at 1586.637 kb on + strand at 1586.637 kb on + strand at 1586.637 kb on + strand at 1586.637 kb on + strand at 1586.637 kb on + strand at 1586.637 kb on + strand at 1586.638 kb on - strand at 1586.638 kb on - strand at 1586.638 kb on - strand at 1586.638 kb on - strand at 1586.638 kb on - strand at 1586.641 kb on + strand at 1586.641 kb on + strand at 1586.641 kb on + strand at 1586.641 kb on + strand at 1586.641 kb on + strand at 1586.642 kb on - strand at 1586.642 kb on - strand at 1586.643 kb on + strand at 1586.643 kb on + strand at 1586.643 kb on + strand at 1586.643 kb on + strand at 1586.643 kb on + strand at 1586.643 kb on + strand at 1586.643 kb on + strand at 1586.644 kb on - strand at 1586.644 kb on - strand at 1586.644 kb on - strand at 1586.644 kb on - strand at 1586.705 kb on + strand at 1586.891 kb on + strand, within AO356_07195 at 1586.891 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.928 kb on - strand, within AO356_07195 at 1586.928 kb on - strand, within AO356_07195 at 1586.928 kb on - strand, within AO356_07195 at 1586.928 kb on - strand, within AO356_07195 at 1587.020 kb on + strand, within AO356_07195 at 1587.409 kb on - strand, within AO356_07195 at 1587.562 kb on + strand at 1587.563 kb on - strand at 1587.578 kb on + strand at 1587.579 kb on - strand at 1587.667 kb on + strand at 1587.667 kb on + strand at 1587.667 kb on + strand at 1587.667 kb on + strand at 1587.668 kb on - strand at 1587.668 kb on - strand at 1587.668 kb on - strand at 1587.668 kb on - strand at 1587.668 kb on - strand at 1587.668 kb on - strand at 1587.668 kb on - strand at 1587.668 kb on - strand at 1587.668 kb on - strand at 1587.755 kb on + strand at 1587.755 kb on + strand at 1587.756 kb on - strand at 1587.756 kb on - strand at 1587.756 kb on - strand at 1587.756 kb on - strand at 1587.801 kb on + strand at 1587.801 kb on + strand at 1587.801 kb on + strand at 1587.802 kb on - strand at 1587.802 kb on - strand at 1587.802 kb on - strand at 1587.802 kb on - strand at 1587.802 kb on - strand at 1587.802 kb on - strand at 1587.933 kb on + strand at 1587.933 kb on + strand at 1587.933 kb on + strand at 1587.934 kb on - strand at 1587.934 kb on - strand at 1587.984 kb on + strand, within AO356_07200 at 1587.984 kb on + strand, within AO356_07200 at 1587.984 kb on + strand, within AO356_07200 at 1587.984 kb on + strand, within AO356_07200 at 1587.985 kb on - strand, within AO356_07200 at 1587.985 kb on - strand, within AO356_07200 at 1587.985 kb on - strand, within AO356_07200 at 1587.985 kb on - strand, within AO356_07200 at 1587.985 kb on - strand, within AO356_07200 at 1587.985 kb on - strand, within AO356_07200 at 1587.985 kb on - strand, within AO356_07200 at 1587.985 kb on - strand, within AO356_07200 at 1587.985 kb on - strand, within AO356_07200 at 1587.985 kb on - strand, within AO356_07200 at 1588.003 kb on - strand, within AO356_07200 at 1588.128 kb on + strand, within AO356_07200 at 1588.129 kb on - strand, within AO356_07200 at 1588.200 kb on + strand, within AO356_07200 at 1588.200 kb on + strand, within AO356_07200 at 1588.201 kb on - strand, within AO356_07200 at 1588.201 kb on - strand, within AO356_07200 at 1588.201 kb on - strand, within AO356_07200 at 1588.225 kb on - strand, within AO356_07200 at 1588.355 kb on - strand, within AO356_07200 at 1588.405 kb on + strand, within AO356_07200 at 1588.405 kb on + strand, within AO356_07200 at 1588.405 kb on + strand, within AO356_07200
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 1,585,815 + -0.6 1,585,816 - -0.4 1,585,898 - -0.2 1,586,051 + +0.1 1,586,051 + +0.3 1,586,051 + -1.0 1,586,051 + +0.4 1,586,051 + +1.0 1,586,051 + -0.2 1,586,052 - -0.3 1,586,052 - -0.4 1,586,052 - +0.5 1,586,052 - +0.1 1,586,052 - +0.7 1,586,052 - +0.2 1,586,052 - +0.2 1,586,052 - -0.4 1,586,052 - -0.7 1,586,055 + -0.6 1,586,055 + +0.2 1,586,056 - +0.8 1,586,071 + -0.4 1,586,071 + +0.2 1,586,071 + -0.2 1,586,071 + +0.0 1,586,071 + +1.2 1,586,072 - +1.2 1,586,394 + AO356_07190 0.74 +0.2 1,586,394 + AO356_07190 0.74 -1.1 1,586,394 + AO356_07190 0.74 -0.6 1,586,395 - AO356_07190 0.74 +0.0 1,586,445 + AO356_07190 0.88 +0.6 1,586,445 + AO356_07190 0.88 +0.9 1,586,454 + +0.4 1,586,455 - +0.7 1,586,455 - +1.2 1,586,455 - +0.8 1,586,490 + -0.9 1,586,620 - -1.0 1,586,637 + +0.3 1,586,637 + -0.9 1,586,637 + +0.4 1,586,637 + +0.7 1,586,637 + +0.5 1,586,637 + +0.5 1,586,637 + -0.3 1,586,637 + -1.6 1,586,638 - -0.2 1,586,638 - -1.0 1,586,638 - -0.3 1,586,638 - +0.1 1,586,638 - +0.2 1,586,641 + -0.3 1,586,641 + -1.1 1,586,641 + +0.3 1,586,641 + -0.3 1,586,641 + -0.0 1,586,642 - +0.4 1,586,642 - -0.1 1,586,643 + +1.4 1,586,643 + +0.7 1,586,643 + +0.0 1,586,643 + +0.9 1,586,643 + +0.2 1,586,643 + +0.5 1,586,643 + -0.0 1,586,644 - +0.6 1,586,644 - -1.0 1,586,644 - -0.4 1,586,644 - +0.6 1,586,705 + -0.4 1,586,891 + AO356_07195 0.15 -2.1 1,586,891 + AO356_07195 0.15 -1.2 1,586,927 + AO356_07195 0.20 -1.6 1,586,927 + AO356_07195 0.20 -1.5 1,586,927 + AO356_07195 0.20 -1.2 1,586,927 + AO356_07195 0.20 -1.1 1,586,927 + AO356_07195 0.20 -2.7 1,586,927 + AO356_07195 0.20 -1.0 1,586,927 + AO356_07195 0.20 -1.3 1,586,927 + AO356_07195 0.20 -0.9 1,586,927 + AO356_07195 0.20 -0.7 1,586,927 + AO356_07195 0.20 -1.6 1,586,927 + AO356_07195 0.20 -1.6 1,586,927 + AO356_07195 0.20 -0.8 1,586,928 - AO356_07195 0.20 +0.8 1,586,928 - AO356_07195 0.20 +0.9 1,586,928 - AO356_07195 0.20 -0.7 1,586,928 - AO356_07195 0.20 -0.2 1,587,020 + AO356_07195 0.33 -1.3 1,587,409 - AO356_07195 0.85 -1.2 1,587,562 + +0.1 1,587,563 - -0.1 1,587,578 + -0.2 1,587,579 - -1.6 1,587,667 + -0.4 1,587,667 + +0.6 1,587,667 + +1.4 1,587,667 + -0.3 1,587,668 - -0.0 1,587,668 - +0.3 1,587,668 - +0.2 1,587,668 - -0.9 1,587,668 - +1.2 1,587,668 - -0.9 1,587,668 - -0.6 1,587,668 - -0.7 1,587,668 - +1.3 1,587,755 + +0.2 1,587,755 + +0.5 1,587,756 - +0.1 1,587,756 - +0.1 1,587,756 - -0.9 1,587,756 - +0.6 1,587,801 + -0.2 1,587,801 + +0.4 1,587,801 + -0.1 1,587,802 - +0.4 1,587,802 - -0.2 1,587,802 - -0.0 1,587,802 - -0.6 1,587,802 - -0.2 1,587,802 - -0.8 1,587,933 + -0.7 1,587,933 + +0.1 1,587,933 + +0.2 1,587,934 - +0.7 1,587,934 - +0.5 1,587,984 + AO356_07200 0.11 +0.7 1,587,984 + AO356_07200 0.11 +0.4 1,587,984 + AO356_07200 0.11 +0.3 1,587,984 + AO356_07200 0.11 +1.1 1,587,985 - AO356_07200 0.11 -0.4 1,587,985 - AO356_07200 0.11 -1.8 1,587,985 - AO356_07200 0.11 +0.1 1,587,985 - AO356_07200 0.11 -0.1 1,587,985 - AO356_07200 0.11 +0.0 1,587,985 - AO356_07200 0.11 +0.3 1,587,985 - AO356_07200 0.11 +0.2 1,587,985 - AO356_07200 0.11 +0.0 1,587,985 - AO356_07200 0.11 -0.1 1,587,985 - AO356_07200 0.11 +0.1 1,588,003 - AO356_07200 0.12 +0.3 1,588,128 + AO356_07200 0.19 +0.6 1,588,129 - AO356_07200 0.19 -0.7 1,588,200 + AO356_07200 0.23 +0.5 1,588,200 + AO356_07200 0.23 -0.0 1,588,201 - AO356_07200 0.23 +0.7 1,588,201 - AO356_07200 0.23 -0.3 1,588,201 - AO356_07200 0.23 +0.5 1,588,225 - AO356_07200 0.25 +0.4 1,588,355 - AO356_07200 0.32 +0.0 1,588,405 + AO356_07200 0.35 -0.7 1,588,405 + AO356_07200 0.35 +0.7 1,588,405 + AO356_07200 0.35 +0.2
Or see this region's nucleotide sequence