Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37255

Experiment: L-Lysine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (N)
3,824,700	+		RR42_RS37250	0.79	-0.5
3,824,700	+		RR42_RS37250	0.79	-1.1
3,824,701	-		RR42_RS37250	0.79	+1.1
3,824,701	-		RR42_RS37250	0.79	-0.2
3,824,704	+		RR42_RS37250	0.79	+0.7
3,824,704	+		RR42_RS37250	0.79	-0.1
3,824,705	-		RR42_RS37250	0.79	-0.4
3,824,739	+		RR42_RS37250	0.80	-0.9
3,824,796	+		RR42_RS37250	0.82	+0.8
3,824,797	-		RR42_RS37250	0.82	-1.1
3,824,802	+		RR42_RS37250	0.82	+0.9
3,824,802	+		RR42_RS37250	0.82	+1.7
3,824,803	-		RR42_RS37250	0.82	+0.4
3,824,803	-		RR42_RS37250	0.82	-2.3
3,824,827	+		RR42_RS37250	0.83	+1.1
3,824,828	-		RR42_RS37250	0.83	-0.2
3,824,828	-		RR42_RS37250	0.83	-1.7
3,824,838	+		RR42_RS37250	0.83	+0.4
3,824,838	+		RR42_RS37250	0.83	+1.3
3,824,912	+		RR42_RS37250	0.85	-0.0
3,824,956	+		RR42_RS37250	0.86	-0.5
3,824,997	+		RR42_RS37250	0.87	-0.6
3,824,998	-		RR42_RS37250	0.87	-0.7
3,825,185	+				-0.3
3,825,186	-				-0.8
3,825,251	+				+0.4
3,825,252	-				-2.1
3,825,252	-				-0.3
3,825,252	-				-0.7
3,825,252	-				+1.6
3,825,255	+				-1.4
3,825,256	-				+0.3
3,825,256	-				+0.6
3,825,290	+				-0.2
3,825,306	+				+0.8
3,825,306	+				-0.1
3,825,306	+				+0.3
3,825,339	+				-0.1
3,825,342	+				-1.2
3,825,343	-				+0.9
3,825,352	+				+0.1
3,825,353	-				-2.0
3,825,358	+				-0.0
3,825,375	+				+0.3
3,825,395	+				+0.9
3,825,444	+				-0.7
3,825,444	+				+0.1
3,825,445	-				-0.5
3,825,496	+				-0.9
3,825,497	-				-0.2
3,825,620	+				-0.3
3,825,653	+				-2.4
3,825,675	+				-0.3
3,825,731	+				+0.1
3,825,731	+				-1.3
3,825,765	+				+0.4
3,825,801	+				+0.1
3,825,801	+				+0.2
3,825,874	+				-1.1
3,825,876	+				+0.7
3,825,905	+				+0.1
3,825,905	+				+1.3
3,825,907	+				-0.1
3,825,907	+				-0.2
3,825,907	+				-0.5
3,825,907	+				+0.7
3,825,908	-				-4.0
3,826,131	+		RR42_RS37255	0.11	+0.2
3,826,198	+		RR42_RS37255	0.12	+2.1
3,826,257	+		RR42_RS37255	0.14	-0.5
3,826,266	+		RR42_RS37255	0.14	+2.1
3,826,266	+		RR42_RS37255	0.14	-0.5
3,826,342	+		RR42_RS37255	0.16	-0.9
3,826,342	+		RR42_RS37255	0.16	+0.9
3,826,481	-		RR42_RS37255	0.19	+0.3
3,826,481	-		RR42_RS37255	0.19	-0.6
3,826,496	+		RR42_RS37255	0.19	+0.0
3,826,506	+		RR42_RS37255	0.20	-0.4
3,826,511	-		RR42_RS37255	0.20	-1.1
3,826,561	+		RR42_RS37255	0.21	+0.5
3,826,561	+		RR42_RS37255	0.21	-0.7
3,826,576	-		RR42_RS37255	0.21	+1.6
3,826,662	+		RR42_RS37255	0.23	+0.1
3,826,663	-		RR42_RS37255	0.23	+0.1
3,826,663	-		RR42_RS37255	0.23	-1.2
3,826,751	+		RR42_RS37255	0.25	+0.2
3,826,791	-		RR42_RS37255	0.26	-0.6
3,826,894	-		RR42_RS37255	0.29	+0.1
3,826,894	-		RR42_RS37255	0.29	-0.4
3,826,894	-		RR42_RS37255	0.29	+0.8
3,826,905	+		RR42_RS37255	0.29	+0.4
3,826,906	-		RR42_RS37255	0.29	+0.4
3,826,978	+		RR42_RS37255	0.31	-0.4
3,826,979	-		RR42_RS37255	0.31	+1.1
3,827,156	+		RR42_RS37255	0.35	-0.8
3,827,156	+		RR42_RS37255	0.35	+0.3
3,827,169	+		RR42_RS37255	0.35	-0.1
3,827,169	+		RR42_RS37255	0.35	+0.2
3,827,247	+		RR42_RS37255	0.37	-0.6
3,827,251	+		RR42_RS37255	0.37	+0.6
3,827,267	+		RR42_RS37255	0.38	-1.7
3,827,268	-		RR42_RS37255	0.38	+0.1
3,827,271	+		RR42_RS37255	0.38	+0.6
3,827,271	+		RR42_RS37255	0.38	-0.9
3,827,271	+				+1.1
3,827,271	+		RR42_RS37255	0.38	-0.6
3,827,272	-		RR42_RS37255	0.38	-0.4
3,827,341	+		RR42_RS37255	0.40	-0.9
3,827,341	+		RR42_RS37255	0.40	-0.4
3,827,342	-		RR42_RS37255	0.40	-0.5
3,827,344	+		RR42_RS37255	0.40	-1.3
3,827,402	+		RR42_RS37255	0.41	-0.8
3,827,433	+		RR42_RS37255	0.42	+0.7
3,827,433	+		RR42_RS37255	0.42	+0.3
3,827,434	-		RR42_RS37255	0.42	-0.3
3,827,437	-		RR42_RS37255	0.42	-0.0
3,827,492	+		RR42_RS37255	0.43	-0.1
3,827,492	+		RR42_RS37255	0.43	-0.8
3,827,492	+		RR42_RS37255	0.43	-0.7
3,827,498	+		RR42_RS37255	0.43	+0.1
3,827,498	+		RR42_RS37255	0.43	+0.5
3,827,499	-		RR42_RS37255	0.43	-0.4
3,827,517	-		RR42_RS37255	0.44	-0.3
3,827,560	+		RR42_RS37255	0.45	+0.9
3,827,560	+		RR42_RS37255	0.45	-0.2
3,827,560	+		RR42_RS37255	0.45	-1.1
3,827,567	+		RR42_RS37255	0.45	-0.2
3,827,670	+		RR42_RS37255	0.48	-0.6
3,827,671	-		RR42_RS37255	0.48	-0.3
3,827,671	-		RR42_RS37255	0.48	-0.3
3,827,726	+		RR42_RS37255	0.49	-1.3
3,827,726	+		RR42_RS37255	0.49	+0.6
3,827,727	-		RR42_RS37255	0.49	+1.4
3,827,737	+		RR42_RS37255	0.49	-0.4
3,827,738	-		RR42_RS37255	0.49	-0.1
3,827,738	-		RR42_RS37255	0.49	-2.7
3,827,738	-		RR42_RS37255	0.49	+0.8
3,827,778	+		RR42_RS37255	0.50	-0.7
3,827,779	-		RR42_RS37255	0.50	-0.7
3,827,779	-		RR42_RS37255	0.50	-0.8
3,827,779	-		RR42_RS37255	0.50	-0.6
3,827,781	+		RR42_RS37255	0.50	-0.2
3,827,781	+		RR42_RS37255	0.50	+0.5
3,827,782	-		RR42_RS37255	0.50	-0.9
3,827,782	-		RR42_RS37255	0.50	+0.1
3,827,820	+		RR42_RS37255	0.51	-0.4
3,827,820	+		RR42_RS37255	0.51	-1.3
3,827,820	+		RR42_RS37255	0.51	-0.3
3,827,821	-		RR42_RS37255	0.51	-0.4
3,827,841	+		RR42_RS37255	0.52	-0.4
3,827,907	-		RR42_RS37255	0.53	+0.0
3,827,959	+		RR42_RS37255	0.54	-1.1
3,827,959	+		RR42_RS37255	0.54	-0.6
3,827,960	-		RR42_RS37255	0.55	-0.1
3,827,960	-		RR42_RS37255	0.55	-2.3
3,827,965	+		RR42_RS37255	0.55	-0.2
3,828,053	+		RR42_RS37255	0.57	+0.7
3,828,124	+		RR42_RS37255	0.58	+1.6
3,828,125	-		RR42_RS37255	0.58	+0.0
3,828,139	+		RR42_RS37255	0.59	-2.4
3,828,348	+		RR42_RS37255	0.64	+0.5
3,828,355	+		RR42_RS37255	0.64	+0.2
3,828,405	+		RR42_RS37255	0.65	+0.4
3,828,405	+		RR42_RS37255	0.65	+2.9
3,828,406	-		RR42_RS37255	0.65	-0.5
3,828,467	+		RR42_RS37255	0.67	-0.2
3,828,467	+		RR42_RS37255	0.67	+0.1
3,828,467	+		RR42_RS37255	0.67	-0.7
3,828,533	+		RR42_RS37255	0.68	-0.1
3,828,534	-		RR42_RS37255	0.68	-2.1
3,828,534	-		RR42_RS37255	0.68	-0.9
3,828,541	+		RR42_RS37255	0.68	-0.2
3,828,547	+		RR42_RS37255	0.69	-0.1
3,828,560	+		RR42_RS37255	0.69	-0.4
3,828,560	+		RR42_RS37255	0.69	-0.4
3,828,561	-		RR42_RS37255	0.69	-0.9
3,828,603	+		RR42_RS37255	0.70	-0.4
3,828,603	+		RR42_RS37255	0.70	-2.5
3,828,699	+		RR42_RS37255	0.72	-0.0
3,828,758	+		RR42_RS37255	0.74	-1.4
3,828,758	+		RR42_RS37255	0.74	-0.1
3,829,001	+		RR42_RS37255	0.80	+1.6
3,829,002	-		RR42_RS37255	0.80	-0.7
3,829,108	+		RR42_RS37255	0.82	-0.9
3,829,159	+		RR42_RS37255	0.83	+0.3
3,829,227	+		RR42_RS37255	0.85	+0.9
3,829,228	-		RR42_RS37255	0.85	-1.5
3,829,236	+		RR42_RS37255	0.85	+0.3
3,829,237	-		RR42_RS37255	0.85	-1.9
3,829,249	+		RR42_RS37255	0.86	+0.8
3,829,249	+		RR42_RS37255	0.86	-0.1
3,829,249	+		RR42_RS37255	0.86	-2.4
3,829,250	-		RR42_RS37255	0.86	+0.9
3,829,336	+		RR42_RS37255	0.88	-0.3
3,829,442	+				+0.1
3,829,442	+				+0.6
3,829,442	+				-0.1
3,829,447	-				+0.9
3,829,447	-				-0.7
3,829,447	-				+1.1
3,829,491	+				+0.6
3,829,491	+				-0.2
3,829,491	+				+0.9
3,829,510	+				+0.3
3,829,512	-				+0.4
3,829,512	-				-0.9
3,829,653	-				+0.9
3,829,692	+				-0.2
3,829,763	+				-0.9
3,829,764	-				+0.4
3,829,764	-				+0.8
3,829,773	+				+0.1
3,829,773	+				-0.8
3,829,774	-				+0.1
3,829,774	-				-0.9
3,829,786	+				-1.4
3,829,822	+				+2.4
3,829,822	+				+0.3
3,829,822	+				+0.4
3,829,822	+				-0.3
3,829,822	+				+0.1
3,829,823	-				-0.5
3,829,823	-				+0.0
3,829,868	-				+0.1
3,829,910	+				+0.2
3,829,926	+				+1.2
3,829,926	+				+0.7
3,829,926	+				-2.5
3,829,927	-				-0.8
3,829,932	+				+2.4
3,829,994	+				+1.2
3,829,994	+				-0.4
3,829,994	+				-0.4
3,829,995	-				-2.0
3,829,998	+				+1.2
3,830,012	+				-0.5
3,830,082	+				+0.5
3,830,083	-				-2.6
3,830,131	+				-0.2
3,830,131	+				+0.1
3,830,132	-				-3.2
3,830,165	+				+0.5
3,830,165	+				-0.4
3,830,285	-				-0.2
3,830,285	-				-0.5
3,830,320	+				+0.2
3,830,327	+				+1.4
3,830,338	+				+0.5
3,830,338	+				+0.4
3,830,359	+				+0.6
3,830,363	+				-0.8
3,830,366	-				-0.2
3,830,382	+				+0.8
3,830,383	-				+0.2
3,830,383	-				+0.2
3,830,383	-				-0.7
3,830,398	-				+0.2
3,830,427	+				-0.9
3,830,427	+				-0.8
3,830,428	-				-1.5
3,830,494	+				+0.8
3,830,494	+				+0.4
3,830,495	-				-0.1
3,830,495	-				-0.6
3,830,495	-				-1.5
3,830,495	-				+1.6
3,830,497	-				-0.1
3,830,524	+				-0.7
3,830,620	+		RR42_RS37260	0.14	+0.0
3,830,621	-		RR42_RS37260	0.15	-0.5
3,830,655	+		RR42_RS37260	0.18	+0.8