Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS21910 and RR42_RS21915 are separated by 78 nucleotides RR42_RS21915 and RR42_RS21920 are separated by 209 nucleotides RR42_RS21920 and RR42_RS21925 are separated by 168 nucleotides RR42_RS21925 and RR42_RS21930 are separated by 170 nucleotides
RR42_RS21910: RR42_RS21910 - tRNA-Asp, at 243,466 to 243,542
_RS21910
RR42_RS21915: RR42_RS21915 - tRNA-Glu, at 243,621 to 243,696
_RS21915
RR42_RS21920: RR42_RS21920 - hypothetical protein, at 243,906 to 244,307
_RS21920
RR42_RS21925: RR42_RS21925 - membrane protein, at 244,476 to 245,003
_RS21925
RR42_RS21930: RR42_RS21930 - hypothetical protein, at 245,174 to 246,007
_RS21930
Position (kb) 244
245
246 Strain fitness (log2 ratio) -1
0
1 at 243.534 kb on + strand, within RR42_RS21910 at 243.698 kb on + strand at 243.698 kb on + strand at 243.698 kb on + strand at 243.749 kb on + strand at 243.749 kb on + strand at 243.783 kb on + strand at 243.784 kb on - strand at 243.784 kb on - strand at 243.821 kb on + strand at 243.827 kb on + strand at 243.827 kb on + strand at 243.827 kb on + strand at 243.828 kb on - strand at 243.828 kb on - strand at 244.358 kb on - strand at 244.373 kb on + strand at 244.373 kb on + strand at 244.474 kb on + strand at 244.474 kb on + strand at 244.475 kb on - strand at 244.475 kb on - strand at 244.567 kb on - strand, within RR42_RS21925 at 244.679 kb on + strand, within RR42_RS21925 at 244.974 kb on + strand at 244.975 kb on - strand at 244.975 kb on - strand at 244.975 kb on - strand at 245.346 kb on + strand, within RR42_RS21930 at 245.346 kb on + strand, within RR42_RS21930 at 245.346 kb on + strand, within RR42_RS21930 at 245.347 kb on - strand, within RR42_RS21930 at 245.598 kb on + strand, within RR42_RS21930 at 245.849 kb on - strand, within RR42_RS21930 at 245.898 kb on + strand, within RR42_RS21930 at 245.898 kb on + strand, within RR42_RS21930 at 245.899 kb on - strand, within RR42_RS21930 at 245.899 kb on - strand, within RR42_RS21930 at 245.899 kb on - strand, within RR42_RS21930 at 245.910 kb on + strand, within RR42_RS21930 at 245.985 kb on + strand at 245.986 kb on - strand at 245.986 kb on - strand at 245.997 kb on + strand at 245.997 kb on + strand at 245.998 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 243,534 + RR42_RS21910 0.88 -1.1 243,698 + -0.7 243,698 + -0.2 243,698 + +0.6 243,749 + +0.6 243,749 + +1.3 243,783 + -1.1 243,784 - -0.5 243,784 - -0.6 243,821 + -0.1 243,827 + +0.6 243,827 + -0.4 243,827 + -0.6 243,828 - +0.0 243,828 - -0.6 244,358 - -0.7 244,373 + +0.6 244,373 + +0.0 244,474 + -0.2 244,474 + -0.9 244,475 - -0.2 244,475 - +0.2 244,567 - RR42_RS21925 0.17 +1.0 244,679 + RR42_RS21925 0.38 +0.2 244,974 + +0.2 244,975 - +0.4 244,975 - +0.4 244,975 - +0.2 245,346 + RR42_RS21930 0.21 -0.7 245,346 + RR42_RS21930 0.21 -0.5 245,346 + RR42_RS21930 0.21 -0.1 245,347 - RR42_RS21930 0.21 +0.7 245,598 + RR42_RS21930 0.51 -0.6 245,849 - RR42_RS21930 0.81 +0.6 245,898 + RR42_RS21930 0.87 +0.5 245,898 + RR42_RS21930 0.87 -1.4 245,899 - RR42_RS21930 0.87 -0.2 245,899 - RR42_RS21930 0.87 +0.3 245,899 - RR42_RS21930 0.87 +0.4 245,910 + RR42_RS21930 0.88 -0.9 245,985 + -0.1 245,986 - +0.5 245,986 - +0.7 245,997 + -0.2 245,997 + +0.2 245,998 - +1.2
Or see this region's nucleotide sequence