Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS02330 and RR42_RS02335 are separated by 14 nucleotides RR42_RS02335 and RR42_RS02340 are separated by 20 nucleotides
RR42_RS02330: RR42_RS02330 - trehalose-6-phosphate synthase, at 522,790 to 524,190
_RS02330
RR42_RS02335: RR42_RS02335 - molybdopterin-guanine dinucleotide biosynthesis protein MobA, at 524,205 to 524,810
_RS02335
RR42_RS02340: RR42_RS02340 - lipoprotein, at 524,831 to 525,859
_RS02340
Position (kb) 524
525 Strain fitness (log2 ratio) -1
0
1 at 523.269 kb on + strand, within RR42_RS02330 at 523.342 kb on + strand, within RR42_RS02330 at 523.433 kb on - strand, within RR42_RS02330 at 523.540 kb on + strand, within RR42_RS02330 at 523.541 kb on - strand, within RR42_RS02330 at 523.561 kb on + strand, within RR42_RS02330 at 523.562 kb on - strand, within RR42_RS02330 at 523.603 kb on + strand, within RR42_RS02330 at 523.726 kb on + strand, within RR42_RS02330 at 523.727 kb on - strand, within RR42_RS02330 at 523.781 kb on - strand, within RR42_RS02330 at 523.810 kb on + strand, within RR42_RS02330 at 523.962 kb on - strand, within RR42_RS02330 at 524.017 kb on + strand, within RR42_RS02330 at 524.022 kb on + strand, within RR42_RS02330 at 524.023 kb on - strand, within RR42_RS02330 at 524.061 kb on + strand at 524.062 kb on - strand at 524.062 kb on - strand at 524.062 kb on - strand at 524.062 kb on - strand at 524.146 kb on + strand at 524.146 kb on + strand at 524.147 kb on - strand at 524.147 kb on - strand at 524.181 kb on - strand at 524.224 kb on - strand at 524.658 kb on + strand, within RR42_RS02335 at 524.994 kb on + strand, within RR42_RS02340 at 524.994 kb on + strand, within RR42_RS02340 at 524.995 kb on - strand, within RR42_RS02340 at 525.105 kb on + strand, within RR42_RS02340 at 525.106 kb on - strand, within RR42_RS02340 at 525.106 kb on - strand, within RR42_RS02340 at 525.270 kb on + strand, within RR42_RS02340 at 525.271 kb on - strand, within RR42_RS02340 at 525.333 kb on + strand, within RR42_RS02340 at 525.615 kb on + strand, within RR42_RS02340 at 525.791 kb on + strand at 525.792 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 523,269 + RR42_RS02330 0.34 -0.6 523,342 + RR42_RS02330 0.39 +0.1 523,433 - RR42_RS02330 0.46 +0.3 523,540 + RR42_RS02330 0.54 -0.6 523,541 - RR42_RS02330 0.54 -0.6 523,561 + RR42_RS02330 0.55 +0.7 523,562 - RR42_RS02330 0.55 -0.4 523,603 + RR42_RS02330 0.58 -0.1 523,726 + RR42_RS02330 0.67 -0.0 523,727 - RR42_RS02330 0.67 -0.7 523,781 - RR42_RS02330 0.71 +0.4 523,810 + RR42_RS02330 0.73 -0.5 523,962 - RR42_RS02330 0.84 -0.3 524,017 + RR42_RS02330 0.88 -0.4 524,022 + RR42_RS02330 0.88 -0.1 524,023 - RR42_RS02330 0.88 +0.1 524,061 + -0.2 524,062 - -0.5 524,062 - +0.5 524,062 - -0.4 524,062 - -0.4 524,146 + +0.6 524,146 + -0.8 524,147 - +0.6 524,147 - -0.5 524,181 - -0.6 524,224 - +0.1 524,658 + RR42_RS02335 0.75 -1.3 524,994 + RR42_RS02340 0.16 -0.6 524,994 + RR42_RS02340 0.16 -0.3 524,995 - RR42_RS02340 0.16 +0.8 525,105 + RR42_RS02340 0.27 -0.1 525,106 - RR42_RS02340 0.27 +0.0 525,106 - RR42_RS02340 0.27 -0.2 525,270 + RR42_RS02340 0.43 -0.3 525,271 - RR42_RS02340 0.43 +0.3 525,333 + RR42_RS02340 0.49 +0.0 525,615 + RR42_RS02340 0.76 +0.4 525,791 + +0.1 525,792 - +0.0
Or see this region's nucleotide sequence