Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS09140

Experiment: R2A with arsenate 15.625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with arsenate 15.625 mM
2,001,386	+				+0.8
2,001,386	+				+0.6
2,001,386	+				-0.1
2,001,386	+				+1.9
2,001,386	+				-2.5
2,001,386	+				-0.4
2,001,386	+				-1.0
2,001,386	+				-1.0
2,001,386	+				+1.8
2,001,386	+				-1.1
2,001,387	-				-0.7
2,001,387	-				-0.4
2,001,387	-				+1.1
2,001,387	-				-1.5
2,001,387	-				+0.3
2,001,387	-				-0.8
2,001,387	-				+0.2
2,001,387	-				+1.0
2,001,387	-				-0.5
2,001,387	-				-0.9
2,001,387	-				+0.1
2,001,436	+				+0.1
2,001,436	+				-0.5
2,001,436	+				+0.2
2,001,436	+				+0.6
2,001,436	+				-1.5
2,001,436	+				-0.4
2,001,436	+				+0.1
2,001,437	-				-0.8
2,001,437	-				-0.1
2,001,437	-				+1.3
2,001,437	-				-0.1
2,001,437	-				-0.7
2,001,437	-				-0.2
2,001,455	+				-0.0
2,001,455	+				+0.9
2,001,455	+				-0.7
2,001,455	+				+0.2
2,001,455	+				+0.9
2,001,455	+				-0.1
2,001,455	+				-0.8
2,001,455	+				-0.2
2,001,455	+				-0.1
2,001,455	+				-0.2
2,001,455	+				+1.0
2,001,455	+				+0.3
2,001,455	+				+0.4
2,001,455	+				-0.5
2,001,455	+				+0.3
2,001,455	+				-0.1
2,001,455	+				-1.5
2,001,455	+				+0.3
2,001,455	+				+0.9
2,001,455	+				+0.8
2,001,455	+				-0.7
2,001,455	+				+1.0
2,001,455	+				+0.2
2,001,456	-				+0.0
2,001,456	-				+0.2
2,001,456	-				-2.0
2,001,456	-				-1.5
2,001,456	-				+0.4
2,001,456	-				-0.7
2,001,456	-				+0.3
2,001,456	-				+2.3
2,001,456	-				-0.8
2,001,456	-				+0.8
2,001,456	-				+0.2
2,001,456	-				+0.7
2,001,456	-				+0.1
2,001,456	-				-0.4
2,001,456	-				+0.3
2,001,456	-				-1.4
2,001,456	-				+0.5
2,001,456	-				+0.4
2,001,456	-				-0.0
2,001,456	-				-0.1
2,003,556	+				+0.3
2,003,556	+				-0.1
2,003,556	+				-0.4
2,003,556	+				-0.5
2,003,556	+				+0.4
2,003,556	+				-1.2
2,003,556	+				+0.3
2,003,556	+				-1.7
2,003,556	+				+0.3
2,003,556	+				+1.4
2,003,556	+				+0.0
2,003,556	+				+0.3
2,003,557	-				-1.7
2,003,557	-				-0.1
2,003,557	-				-0.9
2,003,557	-				-0.2
2,003,695	+				-0.6
2,003,695	+				+0.5
2,003,695	+				-0.6
2,003,695	+				+0.4
2,003,695	+				+0.0
2,003,695	+				+0.3
2,003,695	+				+0.2
2,003,695	+				+0.2
2,003,695	+				+0.4
2,003,695	+				+1.3
2,003,695	+				+1.2
2,003,695	+				+1.1
2,003,695	+				+1.2
2,003,696	-				-0.2
2,003,696	-				+0.5
2,003,696	-				+0.9
2,003,929	+		LRK54_RS09145	0.39	-1.6
2,003,929	+		LRK54_RS09145	0.39	+0.4
2,003,929	+		LRK54_RS09145	0.39	+1.8
2,003,929	+		LRK54_RS09145	0.39	+0.8
2,003,929	+		LRK54_RS09145	0.39	+0.3
2,003,929	+		LRK54_RS09145	0.39	+0.2
2,003,930	-		LRK54_RS09145	0.39	-0.2
2,003,930	-		LRK54_RS09145	0.39	-0.2
2,003,930	-		LRK54_RS09145	0.39	-0.2
2,003,930	-		LRK54_RS09145	0.39	+0.3
2,004,007	+		LRK54_RS09145	0.48	-0.7
2,004,007	+		LRK54_RS09145	0.48	-1.1
2,004,007	+		LRK54_RS09145	0.48	+0.2
2,004,007	+		LRK54_RS09145	0.48	-0.7
2,004,007	+		LRK54_RS09145	0.48	+0.3
2,004,007	+		LRK54_RS09145	0.48	+1.0
2,004,007	+		LRK54_RS09145	0.48	-0.2
2,004,007	+		LRK54_RS09145	0.48	-1.4
2,004,007	+		LRK54_RS09145	0.48	+1.6
2,004,007	+		LRK54_RS09145	0.48	-0.2
2,004,007	+		LRK54_RS09145	0.48	-0.6
2,004,007	+		LRK54_RS09145	0.48	+0.2
2,004,007	+		LRK54_RS09145	0.48	+0.8
2,004,007	+		LRK54_RS09145	0.48	-1.1
2,004,007	+		LRK54_RS09145	0.48	+0.8
2,004,007	+		LRK54_RS09145	0.48	+0.7
2,004,007	+		LRK54_RS09145	0.48	+0.3
2,004,007	+		LRK54_RS09145	0.48	+0.1
2,004,007	+		LRK54_RS09145	0.48	-0.5
2,004,007	+		LRK54_RS09145	0.48	-0.7
2,004,007	+		LRK54_RS09145	0.48	+0.0
2,004,007	+		LRK54_RS09145	0.48	+0.3
2,004,007	+		LRK54_RS09145	0.48	-0.8
2,004,007	+		LRK54_RS09145	0.48	-0.2
2,004,007	+		LRK54_RS09145	0.48	+0.6
2,004,007	+		LRK54_RS09145	0.48	+2.3
2,004,007	+		LRK54_RS09145	0.48	-0.5
2,004,007	+		LRK54_RS09145	0.48	-0.5
2,004,007	+		LRK54_RS09145	0.48	+0.9
2,004,007	+		LRK54_RS09145	0.48	+0.5
2,004,007	+		LRK54_RS09145	0.48	+0.8
2,004,007	+		LRK54_RS09145	0.48	-0.0
2,004,007	+		LRK54_RS09145	0.48	-0.0
2,004,007	+		LRK54_RS09145	0.48	+0.4
2,004,007	+		LRK54_RS09145	0.48	-0.0
2,004,007	+		LRK54_RS09145	0.48	+0.3
2,004,007	+		LRK54_RS09145	0.48	+0.3
2,004,007	+		LRK54_RS09145	0.48	-1.7
2,004,008	-		LRK54_RS09145	0.48	-1.8
2,004,008	-		LRK54_RS09145	0.48	+1.8
2,004,008	-		LRK54_RS09145	0.48	-1.8
2,004,008	-		LRK54_RS09145	0.48	+0.2
2,004,008	-		LRK54_RS09145	0.48	-1.4
2,004,008	-		LRK54_RS09145	0.48	-1.4
2,004,008	-		LRK54_RS09145	0.48	+0.8
2,004,008	-		LRK54_RS09145	0.48	+0.2
2,004,008	-		LRK54_RS09145	0.48	+0.6
2,004,008	-		LRK54_RS09145	0.48	-0.3
2,004,008	-		LRK54_RS09145	0.48	+2.3
2,004,008	-		LRK54_RS09145	0.48	+1.2
2,004,008	-		LRK54_RS09145	0.48	+0.6
2,004,008	-		LRK54_RS09145	0.48	-0.5
2,004,008	-		LRK54_RS09145	0.48	+0.6
2,004,008	-		LRK54_RS09145	0.48	+1.0
2,004,008	-		LRK54_RS09145	0.48	+0.1
2,004,008	-		LRK54_RS09145	0.48	+0.0
2,004,008	-		LRK54_RS09145	0.48	+1.2
2,004,008	-		LRK54_RS09145	0.48	-0.3
2,004,008	-		LRK54_RS09145	0.48	-0.4
2,004,008	-		LRK54_RS09145	0.48	-1.1
2,004,008	-		LRK54_RS09145	0.48	-0.4
2,004,008	-		LRK54_RS09145	0.48	+0.9
2,004,008	-		LRK54_RS09145	0.48	-0.2
2,004,008	-		LRK54_RS09145	0.48	-0.2
2,004,052	+		LRK54_RS09145	0.54	+0.8
2,004,052	+		LRK54_RS09145	0.54	-2.3
2,004,052	+		LRK54_RS09145	0.54	+0.0
2,004,052	+		LRK54_RS09145	0.54	+0.9
2,004,052	+		LRK54_RS09145	0.54	-0.7
2,004,052	+		LRK54_RS09145	0.54	+0.8
2,004,052	+		LRK54_RS09145	0.54	-0.0
2,004,052	+		LRK54_RS09145	0.54	+0.5
2,004,052	+		LRK54_RS09145	0.54	-0.5
2,004,052	+		LRK54_RS09145	0.54	-0.5
2,004,052	+		LRK54_RS09145	0.54	-1.4
2,004,052	+		LRK54_RS09145	0.54	+0.1
2,004,052	+		LRK54_RS09145	0.54	+0.7
2,004,052	+		LRK54_RS09145	0.54	+3.1
2,004,052	+		LRK54_RS09145	0.54	+1.5
2,004,052	+		LRK54_RS09145	0.54	-1.9
2,004,052	+		LRK54_RS09145	0.54	-0.8
2,004,052	+		LRK54_RS09145	0.54	+1.6
2,004,052	+		LRK54_RS09145	0.54	-0.4
2,004,052	+		LRK54_RS09145	0.54	-0.5
2,004,052	+		LRK54_RS09145	0.54	+0.4
2,004,052	+		LRK54_RS09145	0.54	+0.4
2,004,052	+		LRK54_RS09145	0.54	+1.0
2,004,052	+		LRK54_RS09145	0.54	-0.5
2,004,052	+		LRK54_RS09145	0.54	+0.2
2,004,052	+		LRK54_RS09145	0.54	-0.1
2,004,052	+		LRK54_RS09145	0.54	-0.5
2,004,052	+		LRK54_RS09145	0.54	-0.1
2,004,052	+		LRK54_RS09145	0.54	-0.7
2,004,052	+		LRK54_RS09145	0.54	-0.1
2,004,052	+		LRK54_RS09145	0.54	+0.3
2,004,052	+		LRK54_RS09145	0.54	-1.2
2,004,052	+		LRK54_RS09145	0.54	+0.0
2,004,052	+		LRK54_RS09145	0.54	+0.3
2,004,052	+		LRK54_RS09145	0.54	-1.0
2,004,052	+		LRK54_RS09145	0.54	+1.6
2,004,052	+		LRK54_RS09145	0.54	-0.7
2,004,052	+		LRK54_RS09145	0.54	-0.3
2,004,052	+		LRK54_RS09145	0.54	+0.5
2,004,052	+		LRK54_RS09145	0.54	-0.1
2,004,052	+		LRK54_RS09145	0.54	-0.9
2,004,053	-		LRK54_RS09145	0.54	+0.0
2,004,053	-		LRK54_RS09145	0.54	-0.4
2,004,053	-		LRK54_RS09145	0.54	-0.8
2,004,053	-		LRK54_RS09145	0.54	+0.5
2,004,053	-		LRK54_RS09145	0.54	-1.9
2,004,053	-		LRK54_RS09145	0.54	+0.4
2,004,053	-		LRK54_RS09145	0.54	+1.1
2,004,053	-		LRK54_RS09145	0.54	-0.0
2,004,053	-		LRK54_RS09145	0.54	+0.0
2,004,053	-		LRK54_RS09145	0.54	-1.4
2,004,053	-		LRK54_RS09145	0.54	+0.8
2,004,053	-		LRK54_RS09145	0.54	-0.7
2,004,053	-		LRK54_RS09145	0.54	+1.0
2,004,053	-		LRK54_RS09145	0.54	-0.1
2,004,053	-		LRK54_RS09145	0.54	-1.4
2,004,053	-		LRK54_RS09145	0.54	+0.2
2,004,053	-		LRK54_RS09145	0.54	+0.8
2,004,053	-		LRK54_RS09145	0.54	+0.3
2,004,053	-		LRK54_RS09145	0.54	+0.9
2,004,053	-		LRK54_RS09145	0.54	-0.3
2,004,053	-		LRK54_RS09145	0.54	-0.4
2,004,053	-		LRK54_RS09145	0.54	-0.7
2,004,053	-		LRK54_RS09145	0.54	+1.3
2,004,053	-		LRK54_RS09145	0.54	-0.8
2,004,053	-		LRK54_RS09145	0.54	+0.5
2,004,053	-		LRK54_RS09145	0.54	-1.4
2,004,053	-		LRK54_RS09145	0.54	+1.6
2,004,053	-		LRK54_RS09145	0.54	+0.0
2,004,053	-		LRK54_RS09145	0.54	-1.2
2,004,053	-		LRK54_RS09145	0.54	+0.7
2,004,053	-		LRK54_RS09145	0.54	+0.0
2,004,100	+		LRK54_RS09145	0.60	-1.1
2,004,100	+		LRK54_RS09145	0.60	+1.0
2,004,100	+		LRK54_RS09145	0.60	+1.3
2,004,100	+		LRK54_RS09145	0.60	+1.7
2,004,101	-		LRK54_RS09145	0.60	+1.7
2,004,101	-		LRK54_RS09145	0.60	+0.1
2,004,101	-		LRK54_RS09145	0.60	+1.9
2,004,101	-		LRK54_RS09145	0.60	+1.6
2,004,315	+		LRK54_RS09145	0.87	-0.5
2,004,315	+		LRK54_RS09145	0.87	-0.0
2,004,316	-		LRK54_RS09145	0.87	-0.7
2,004,346	+				-1.7
2,004,346	+				+0.3
2,004,346	+				-0.2
2,004,346	+				-0.0
2,004,346	+				-1.1
2,004,346	+				-1.2
2,004,346	+				-0.4
2,004,346	+				-0.4
2,004,346	+				-2.0
2,004,346	+				+0.4
2,004,347	-				-0.3
2,004,347	-				+0.1
2,004,347	-				-0.8
2,004,347	-				+0.5
2,004,347	-				+0.5
2,004,347	-				+0.7
2,004,347	-				-0.3
2,004,347	-				+0.0
2,004,418	+				-0.5
2,004,418	+				-0.5
2,004,418	+				+0.5
2,004,418	+				+0.2
2,004,418	+				-0.8
2,004,418	+				+2.0
2,004,418	+				+1.5
2,004,418	+				-1.2
2,004,418	+				-0.4
2,004,418	+				-2.0
2,004,418	+				+1.7
2,004,418	+				-0.2
2,004,418	+				-0.5
2,004,418	+				+1.6
2,004,418	+				+0.9
2,004,418	+				-0.5
2,004,418	+				+0.1
2,004,419	-				-0.3
2,004,419	-				-1.4
2,004,419	-				+0.4
2,004,419	-				+0.8
2,004,419	-				-0.7
2,004,419	-				-0.3
2,004,419	-				-0.8
2,004,419	-				+0.5
2,004,419	-				+0.3
2,004,419	-				-0.1
2,004,419	-				+0.4
2,004,419	-				+0.3
2,004,419	-				+0.8
2,004,419	-				+0.8
2,004,419	-				+1.8
2,004,419	-				-0.4
2,004,435	+				+0.2
2,004,435	+				+0.2
2,004,435	+				-0.7
2,004,435	+				+0.8
2,004,435	+				+1.7
2,004,435	+				+0.0
2,004,435	+				-0.2
2,004,435	+				+0.5
2,004,435	+				-2.0
2,004,435	+				+0.4
2,004,436	-				+0.2
2,004,436	-				-0.2
2,004,436	-				-1.7
2,004,436	-				+0.7
2,004,436	-				-0.2
2,004,436	-				-0.5
2,004,436	-				-0.7
2,004,436	-				+0.9
2,004,436	-				-0.8
2,004,436	-				+0.6