Strain Fitness in Rahnella sp. WP5 around EX31_RS17665

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
82,419	+				+0.8
82,452	+				+0.8
82,452	+				+0.4
82,452	+				-1.3
82,452	+				-0.8
82,452	+				-1.2
82,452	+				+1.8
82,453	-				+0.3
82,453	-				+1.2
82,453	-				+0.8
82,453	-				+0.6
82,453	-				+1.8
82,453	-				-2.8
82,453	-				-0.8
82,453	-				+0.8
82,453	-				-0.2
82,453	-				-1.6
82,453	-				-1.8
82,482	+		EX31_RS17660	0.12	+2.8
82,482	+		EX31_RS17660	0.12	+0.3
82,648	+		EX31_RS17660	0.28	-0.2
82,648	+		EX31_RS17660	0.28	-1.4
82,648	+		EX31_RS17660	0.28	-0.2
82,738	+		EX31_RS17660	0.37	-0.1
82,740	+		EX31_RS17660	0.37	+0.0
82,740	+		EX31_RS17660	0.37	+0.8
82,740	+		EX31_RS17660	0.37	+0.8
82,741	-		EX31_RS17660	0.38	+0.4
82,741	-		EX31_RS17660	0.38	+2.1
82,741	-		EX31_RS17660	0.38	+0.9
82,783	+		EX31_RS17660	0.42	-2.8
82,784	-		EX31_RS17660	0.42	-0.2
82,792	+		EX31_RS17660	0.42	+2.8
82,793	-		EX31_RS17660	0.43	-0.2
82,863	+		EX31_RS17660	0.49	+1.7
82,864	-		EX31_RS17660	0.49	+1.0
82,864	-		EX31_RS17660	0.49	+0.8
82,864	-		EX31_RS17660	0.49	+0.8
82,864	-		EX31_RS17660	0.49	+0.4
82,975	-		EX31_RS17660	0.60	+2.4
82,975	-		EX31_RS17660	0.60	+0.8
82,975	-		EX31_RS17660	0.60	+1.2
82,975	-		EX31_RS17660	0.60	+1.3
82,975	-		EX31_RS17660	0.60	+1.8
82,992	+		EX31_RS17660	0.62	+0.2
82,992	+		EX31_RS17660	0.62	-1.2
83,009	-		EX31_RS17660	0.64	+0.2
83,129	+		EX31_RS17660	0.75	+1.3
83,129	+		EX31_RS17660	0.75	+1.6
83,130	-		EX31_RS17660	0.75	+0.5
83,130	-		EX31_RS17660	0.75	+0.8
83,130	-		EX31_RS17660	0.75	+0.3
83,217	-		EX31_RS17660	0.84	-1.7
83,248	-		EX31_RS17660	0.87	+0.8
83,284	+				+1.1
83,375	+				-0.6
83,375	+				-1.8
83,375	+				-0.4
83,375	+				-0.6
83,375	+				+1.5
83,376	-				-1.6
83,376	-				+1.4
83,376	-				+1.0
83,376	-				+2.8
83,376	-				+0.0
83,412	-				+0.2
83,417	+				+0.8
83,417	+				+1.8
83,418	-				-2.2
83,418	-				+1.3
83,495	+				+1.3
83,495	+				-0.2
83,561	+		EX31_RS17665	0.14	+0.2
83,561	+		EX31_RS17665	0.14	-0.2
83,561	+		EX31_RS17665	0.14	+1.6
83,561	+		EX31_RS17665	0.14	-0.4
83,679	+		EX31_RS17665	0.24	+1.0
83,679	+		EX31_RS17665	0.24	+0.8
83,680	-		EX31_RS17665	0.24	+0.8
83,680	-		EX31_RS17665	0.24	-0.1
83,680	-		EX31_RS17665	0.24	+1.2
83,680	-		EX31_RS17665	0.24	+2.0
83,741	+		EX31_RS17665	0.29	+0.3
83,843	+		EX31_RS17665	0.38	+0.2
83,843	+		EX31_RS17665	0.38	-0.2
83,843	+		EX31_RS17665	0.38	-0.2
83,844	-		EX31_RS17665	0.38	+0.8
83,844	-		EX31_RS17665	0.38	-1.8
83,847	+		EX31_RS17665	0.38	-0.4
83,848	-		EX31_RS17665	0.38	+1.8
83,882	-		EX31_RS17665	0.41	-1.2
83,889	+		EX31_RS17665	0.41	-0.1
84,030	+		EX31_RS17665	0.53	+0.3
84,031	-		EX31_RS17665	0.53	-0.8
84,031	-		EX31_RS17665	0.53	-0.2
84,031	-		EX31_RS17665	0.53	+0.8
84,031	-		EX31_RS17665	0.53	-0.8
84,031	-		EX31_RS17665	0.53	-0.5
84,031	-		EX31_RS17665	0.53	-0.2
84,032	+		EX31_RS17665	0.53	-0.6
84,032	+		EX31_RS17665	0.53	+2.8
84,033	-		EX31_RS17665	0.53	+2.8
84,033	-		EX31_RS17665	0.53	-0.8
84,033	-		EX31_RS17665	0.53	+1.2
84,120	+		EX31_RS17665	0.61	-1.2
84,120	+		EX31_RS17665	0.61	+0.8
84,121	-		EX31_RS17665	0.61	+0.0
84,265	+		EX31_RS17665	0.73	-1.2
84,265	+		EX31_RS17665	0.73	+0.8
84,266	-		EX31_RS17665	0.73	+2.0
84,266	-		EX31_RS17665	0.73	-0.8
84,340	-		EX31_RS17665	0.79	+0.2
84,340	-		EX31_RS17665	0.79	+0.1
84,447	+		EX31_RS17665	0.88	+1.3
84,447	+		EX31_RS17665	0.88	-0.4
84,448	-		EX31_RS17665	0.88	+2.2
84,448	-		EX31_RS17665	0.88	+0.2
84,486	-				+1.0
84,486	-				+0.8
84,486	-				-0.1
84,544	+				+0.0
84,570	-				-1.5
84,590	+				-0.2
84,591	-				-0.5
84,591	-				-1.2
84,591	-				-0.1
84,591	-				-1.9
84,591	-				+0.3
84,595	-				-0.2
84,597	+				+1.9
84,598	-				+1.1
84,598	-				+0.8
84,618	+				+3.8
84,619	-				+0.6
84,653	-				+0.3
84,658	-				-0.8
84,678	-				+0.8
84,692	-				+0.8
84,718	+				-1.1
84,719	-				-0.8
84,760	+				-0.3
84,848	+				-1.4
84,856	+				-0.2
84,953	-		EX31_RS17670	0.15	+2.3
84,976	+		EX31_RS17670	0.17	+2.5
84,976	+		EX31_RS17670	0.17	+0.5
84,977	-		EX31_RS17670	0.18	+0.6
85,050	+		EX31_RS17670	0.26	+0.8
85,050	+		EX31_RS17670	0.26	+0.2
85,062	+		EX31_RS17670	0.27	+0.3
85,062	+		EX31_RS17670	0.27	-0.2
85,280	-		EX31_RS17670	0.52	-0.8
85,284	+		EX31_RS17670	0.52	+1.0
85,284	+		EX31_RS17670	0.52	-1.6
85,284	+		EX31_RS17670	0.52	-2.8
85,284	+		EX31_RS17670	0.52	+1.6
85,285	-		EX31_RS17670	0.52	-1.2
85,285	-		EX31_RS17670	0.52	-0.4
85,337	+		EX31_RS17670	0.58	+1.2
85,351	+		EX31_RS17670	0.59	+1.3
85,351	+		EX31_RS17670	0.59	+1.1
85,396	+		EX31_RS17670	0.65	+1.5
85,396	+		EX31_RS17670	0.65	+0.8
85,399	+		EX31_RS17670	0.65	+0.3
85,427	+		EX31_RS17670	0.68	+0.1
85,428	-		EX31_RS17670	0.68	-2.1
85,428	-		EX31_RS17670	0.68	-0.6
85,461	+		EX31_RS17670	0.72	+0.2
85,461	+		EX31_RS17670	0.72	-1.2
85,495	+		EX31_RS17670	0.76	+1.6
85,573	+		EX31_RS17670	0.84	-0.6