Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS08570 and EX31_RS08575 are separated by 2 nucleotides EX31_RS08575 and EX31_RS08580 are separated by 124 nucleotides
EX31_RS08570: EX31_RS08570 - phosphoglucosamine mutase, at 220,182 to 221,522
_RS08570
EX31_RS08575: EX31_RS08575 - dihydropteroate synthase, at 221,525 to 222,364
_RS08575
EX31_RS08580: EX31_RS08580 - ATP-dependent zinc metalloprotease FtsH, at 222,489 to 224,432
_RS08580
Position (kb) 221
222
223 Strain fitness (log2 ratio) -1
0
1 at 221.534 kb on - strand at 222.365 kb on - strand at 222.365 kb on - strand at 222.365 kb on - strand at 222.365 kb on - strand at 222.365 kb on - strand at 222.365 kb on - strand at 222.365 kb on - strand at 222.365 kb on - strand at 222.365 kb on - strand at 222.365 kb on - strand at 222.365 kb on - strand at 222.391 kb on + strand at 222.429 kb on + strand at 222.471 kb on + strand at 222.472 kb on - strand at 222.490 kb on + strand at 222.490 kb on + strand at 222.490 kb on + strand at 222.491 kb on - strand at 222.491 kb on - strand at 222.491 kb on - strand at 222.537 kb on - strand at 222.573 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 221,534 - -0.3 222,365 - -0.4 222,365 - -0.5 222,365 - +0.6 222,365 - -1.4 222,365 - -0.1 222,365 - -0.3 222,365 - +0.6 222,365 - -0.1 222,365 - +1.6 222,365 - -1.2 222,365 - +0.2 222,391 + -0.5 222,429 + -0.4 222,471 + +1.0 222,472 - +0.3 222,490 + +1.3 222,490 + -1.0 222,490 + -0.3 222,491 - -0.0 222,491 - -0.5 222,491 - +0.0 222,537 - -0.7 222,573 - +0.4
Or see this region's nucleotide sequence