Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27025 and AO356_27030 are separated by 141 nucleotides AO356_27030 and AO356_27035 are separated by 112 nucleotides
AO356_27025: AO356_27025 - peptidase, at 6,158,740 to 6,160,518
_27025
AO356_27030: AO356_27030 - alkaline proteinase inhibitor, at 6,160,660 to 6,161,097
_27030
AO356_27035: AO356_27035 - serine 3-dehydrogenase, at 6,161,210 to 6,162,664
_27035
Position (kb)
6160
6161
6162 Strain fitness (log2 ratio)
-2
-1
0
1 at 6159.950 kb on + strand, within AO356_27025 at 6159.951 kb on - strand, within AO356_27025 at 6160.064 kb on + strand, within AO356_27025 at 6160.064 kb on + strand, within AO356_27025 at 6160.064 kb on + strand, within AO356_27025 at 6160.064 kb on + strand, within AO356_27025 at 6160.064 kb on + strand, within AO356_27025 at 6160.064 kb on + strand, within AO356_27025 at 6160.064 kb on + strand, within AO356_27025 at 6160.065 kb on - strand, within AO356_27025 at 6160.079 kb on + strand, within AO356_27025 at 6160.079 kb on + strand, within AO356_27025 at 6160.079 kb on + strand, within AO356_27025 at 6160.080 kb on - strand, within AO356_27025 at 6160.143 kb on + strand, within AO356_27025 at 6160.144 kb on - strand, within AO356_27025 at 6160.218 kb on - strand, within AO356_27025 at 6160.280 kb on - strand, within AO356_27025 at 6160.318 kb on + strand, within AO356_27025 at 6160.377 kb on - strand at 6160.390 kb on - strand at 6160.391 kb on + strand at 6160.392 kb on - strand at 6160.392 kb on - strand at 6160.461 kb on + strand at 6160.462 kb on - strand at 6160.462 kb on - strand at 6160.480 kb on - strand at 6160.560 kb on - strand at 6160.560 kb on - strand at 6160.653 kb on + strand at 6160.681 kb on - strand at 6160.681 kb on - strand at 6160.695 kb on + strand at 6160.696 kb on - strand at 6160.696 kb on - strand at 6160.699 kb on + strand at 6160.700 kb on - strand at 6160.804 kb on - strand, within AO356_27030 at 6160.994 kb on - strand, within AO356_27030 at 6161.073 kb on + strand at 6161.092 kb on - strand at 6161.161 kb on + strand at 6161.161 kb on + strand at 6161.161 kb on + strand at 6161.162 kb on - strand at 6161.196 kb on - strand at 6161.206 kb on - strand at 6161.206 kb on - strand at 6161.211 kb on + strand at 6161.830 kb on - strand, within AO356_27035 at 6161.917 kb on - strand, within AO356_27035 at 6161.970 kb on + strand, within AO356_27035 at 6161.971 kb on - strand, within AO356_27035 at 6162.006 kb on + strand, within AO356_27035 at 6162.006 kb on + strand, within AO356_27035 at 6162.007 kb on - strand, within AO356_27035 at 6162.007 kb on - strand, within AO356_27035 at 6162.007 kb on - strand, within AO356_27035 at 6162.007 kb on - strand, within AO356_27035 at 6162.007 kb on - strand, within AO356_27035 at 6162.021 kb on + strand, within AO356_27035 at 6162.021 kb on + strand, within AO356_27035 at 6162.048 kb on + strand, within AO356_27035 at 6162.049 kb on - strand, within AO356_27035
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 6,159,950 + AO356_27025 0.68 -0.3 6,159,951 - AO356_27025 0.68 +1.6 6,160,064 + AO356_27025 0.74 +0.3 6,160,064 + AO356_27025 0.74 -0.6 6,160,064 + AO356_27025 0.74 +0.2 6,160,064 + AO356_27025 0.74 +0.5 6,160,064 + AO356_27025 0.74 -0.1 6,160,064 + AO356_27025 0.74 +0.1 6,160,064 + AO356_27025 0.74 +0.5 6,160,065 - AO356_27025 0.74 +0.0 6,160,079 + AO356_27025 0.75 +0.1 6,160,079 + AO356_27025 0.75 +0.5 6,160,079 + AO356_27025 0.75 -0.1 6,160,080 - AO356_27025 0.75 -1.3 6,160,143 + AO356_27025 0.79 -0.4 6,160,144 - AO356_27025 0.79 +0.5 6,160,218 - AO356_27025 0.83 +0.2 6,160,280 - AO356_27025 0.87 -0.0 6,160,318 + AO356_27025 0.89 +0.2 6,160,377 - +0.3 6,160,390 - -0.1 6,160,391 + -0.5 6,160,392 - +1.0 6,160,392 - +1.1 6,160,461 + +0.5 6,160,462 - +0.4 6,160,462 - -0.7 6,160,480 - +0.4 6,160,560 - -1.0 6,160,560 - -0.2 6,160,653 + +0.5 6,160,681 - -0.2 6,160,681 - -0.4 6,160,695 + -0.4 6,160,696 - +1.2 6,160,696 - +1.3 6,160,699 + -0.1 6,160,700 - -0.4 6,160,804 - AO356_27030 0.33 +1.6 6,160,994 - AO356_27030 0.76 -2.7 6,161,073 + +0.3 6,161,092 - +1.4 6,161,161 + +0.3 6,161,161 + +0.5 6,161,161 + -0.4 6,161,162 - +0.4 6,161,196 - -1.0 6,161,206 - -0.2 6,161,206 - -0.3 6,161,211 + +1.0 6,161,830 - AO356_27035 0.43 +1.2 6,161,917 - AO356_27035 0.49 +0.3 6,161,970 + AO356_27035 0.52 -0.5 6,161,971 - AO356_27035 0.52 -0.6 6,162,006 + AO356_27035 0.55 +0.4 6,162,006 + AO356_27035 0.55 +0.4 6,162,007 - AO356_27035 0.55 +0.6 6,162,007 - AO356_27035 0.55 +1.0 6,162,007 - AO356_27035 0.55 +0.0 6,162,007 - AO356_27035 0.55 -0.5 6,162,007 - AO356_27035 0.55 -0.2 6,162,021 + AO356_27035 0.56 -0.8 6,162,021 + AO356_27035 0.56 -0.2 6,162,048 + AO356_27035 0.58 +0.2 6,162,049 - AO356_27035 0.58 -0.1
Or see this region's nucleotide sequence