Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_17975 and AO356_17980 are separated by 3 nucleotides AO356_17980 and AO356_17985 are separated by 77 nucleotides AO356_17985 and AO356_17990 are separated by 397 nucleotides
AO356_17975: AO356_17975 - histidine triad (HIT) protein, at 4,058,439 to 4,058,864
_17975
AO356_17980: AO356_17980 - hypothetical protein, at 4,058,868 to 4,059,074
_17980
AO356_17985: AO356_17985 - cold-shock protein, at 4,059,152 to 4,059,757
_17985
AO356_17990: AO356_17990 - ferritin, at 4,060,155 to 4,060,625
_17990
Position (kb)
4059
4060 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4058.180 kb on + strand at 4058.191 kb on + strand at 4058.286 kb on + strand at 4058.287 kb on - strand at 4058.287 kb on - strand at 4058.287 kb on - strand at 4058.287 kb on - strand at 4058.432 kb on - strand at 4058.449 kb on + strand at 4058.449 kb on + strand at 4058.450 kb on - strand at 4058.450 kb on - strand at 4058.450 kb on - strand at 4058.450 kb on - strand at 4058.602 kb on + strand, within AO356_17975 at 4058.602 kb on + strand, within AO356_17975 at 4058.602 kb on + strand, within AO356_17975 at 4058.603 kb on - strand, within AO356_17975 at 4058.603 kb on - strand, within AO356_17975 at 4058.603 kb on - strand, within AO356_17975 at 4058.683 kb on + strand, within AO356_17975 at 4058.683 kb on + strand, within AO356_17975 at 4058.683 kb on + strand, within AO356_17975 at 4058.683 kb on + strand, within AO356_17975 at 4058.683 kb on + strand, within AO356_17975 at 4058.683 kb on + strand, within AO356_17975 at 4058.684 kb on - strand, within AO356_17975 at 4058.684 kb on - strand, within AO356_17975 at 4058.684 kb on - strand, within AO356_17975 at 4058.688 kb on - strand, within AO356_17975 at 4058.688 kb on - strand, within AO356_17975 at 4058.688 kb on - strand, within AO356_17975 at 4058.688 kb on - strand, within AO356_17975 at 4058.784 kb on + strand, within AO356_17975 at 4058.784 kb on + strand, within AO356_17975 at 4058.784 kb on + strand, within AO356_17975 at 4058.784 kb on + strand, within AO356_17975 at 4058.785 kb on - strand, within AO356_17975 at 4058.785 kb on - strand, within AO356_17975 at 4058.785 kb on - strand, within AO356_17975 at 4058.785 kb on - strand, within AO356_17975 at 4058.785 kb on - strand, within AO356_17975 at 4058.785 kb on - strand, within AO356_17975 at 4058.785 kb on - strand, within AO356_17975 at 4058.786 kb on + strand, within AO356_17975 at 4058.786 kb on + strand, within AO356_17975 at 4058.786 kb on + strand, within AO356_17975 at 4058.786 kb on + strand, within AO356_17975 at 4058.786 kb on + strand, within AO356_17975 at 4058.786 kb on + strand, within AO356_17975 at 4058.786 kb on + strand, within AO356_17975 at 4058.786 kb on + strand, within AO356_17975 at 4058.786 kb on + strand, within AO356_17975 at 4058.786 kb on + strand, within AO356_17975 at 4058.786 kb on + strand, within AO356_17975 at 4058.786 kb on + strand, within AO356_17975 at 4058.786 kb on + strand, within AO356_17975 at 4058.786 kb on + strand, within AO356_17975 at 4058.786 kb on + strand, within AO356_17975 at 4058.786 kb on + strand, within AO356_17975 at 4058.786 kb on + strand, within AO356_17975 at 4058.786 kb on + strand, within AO356_17975 at 4058.786 kb on + strand, within AO356_17975 at 4058.787 kb on - strand, within AO356_17975 at 4058.787 kb on - strand, within AO356_17975 at 4058.787 kb on - strand, within AO356_17975 at 4058.787 kb on - strand, within AO356_17975 at 4058.787 kb on - strand, within AO356_17975 at 4058.787 kb on - strand, within AO356_17975 at 4058.787 kb on - strand, within AO356_17975 at 4059.069 kb on + strand at 4059.069 kb on + strand at 4059.070 kb on - strand at 4059.070 kb on - strand at 4059.070 kb on - strand at 4059.075 kb on + strand at 4059.103 kb on + strand at 4059.378 kb on + strand, within AO356_17985 at 4059.378 kb on + strand, within AO356_17985 at 4059.378 kb on + strand, within AO356_17985 at 4059.378 kb on + strand, within AO356_17985 at 4059.379 kb on - strand, within AO356_17985 at 4059.379 kb on - strand, within AO356_17985 at 4059.379 kb on - strand, within AO356_17985 at 4059.379 kb on - strand, within AO356_17985 at 4059.379 kb on - strand, within AO356_17985 at 4059.414 kb on + strand, within AO356_17985 at 4059.414 kb on + strand, within AO356_17985 at 4059.629 kb on + strand, within AO356_17985 at 4059.648 kb on + strand, within AO356_17985 at 4059.648 kb on + strand, within AO356_17985 at 4059.648 kb on + strand, within AO356_17985 at 4059.648 kb on + strand, within AO356_17985 at 4059.648 kb on + strand, within AO356_17985 at 4059.648 kb on + strand, within AO356_17985 at 4059.649 kb on - strand, within AO356_17985 at 4059.649 kb on - strand, within AO356_17985 at 4059.649 kb on - strand, within AO356_17985 at 4059.649 kb on - strand, within AO356_17985 at 4059.649 kb on - strand, within AO356_17985 at 4059.672 kb on + strand, within AO356_17985 at 4059.672 kb on + strand, within AO356_17985 at 4059.672 kb on + strand, within AO356_17985 at 4059.697 kb on + strand at 4059.844 kb on + strand at 4059.845 kb on - strand at 4059.845 kb on - strand at 4059.858 kb on + strand at 4059.858 kb on + strand at 4059.858 kb on + strand at 4059.858 kb on + strand at 4059.859 kb on - strand at 4059.859 kb on - strand at 4059.866 kb on - strand at 4059.901 kb on + strand at 4059.902 kb on - strand at 4059.902 kb on - strand at 4059.902 kb on - strand at 4059.905 kb on + strand at 4059.905 kb on + strand at 4059.906 kb on - strand at 4060.040 kb on - strand at 4060.087 kb on - strand at 4060.103 kb on + strand at 4060.104 kb on - strand at 4060.138 kb on + strand at 4060.138 kb on + strand at 4060.138 kb on + strand at 4060.138 kb on + strand at 4060.233 kb on + strand, within AO356_17990 at 4060.233 kb on + strand, within AO356_17990 at 4060.233 kb on + strand, within AO356_17990 at 4060.233 kb on + strand, within AO356_17990 at 4060.233 kb on + strand, within AO356_17990 at 4060.233 kb on + strand, within AO356_17990 at 4060.233 kb on + strand, within AO356_17990 at 4060.233 kb on + strand, within AO356_17990 at 4060.233 kb on + strand, within AO356_17990 at 4060.234 kb on - strand, within AO356_17990 at 4060.234 kb on - strand, within AO356_17990 at 4060.234 kb on - strand, within AO356_17990 at 4060.234 kb on - strand, within AO356_17990 at 4060.234 kb on - strand, within AO356_17990 at 4060.234 kb on - strand, within AO356_17990 at 4060.234 kb on - strand, within AO356_17990 at 4060.234 kb on - strand, within AO356_17990 at 4060.234 kb on - strand, within AO356_17990 at 4060.234 kb on - strand, within AO356_17990 at 4060.234 kb on - strand, within AO356_17990 at 4060.234 kb on - strand, within AO356_17990 at 4060.234 kb on - strand, within AO356_17990 at 4060.234 kb on - strand, within AO356_17990 at 4060.234 kb on - strand, within AO356_17990 at 4060.242 kb on + strand, within AO356_17990 at 4060.243 kb on - strand, within AO356_17990 at 4060.320 kb on + strand, within AO356_17990 at 4060.320 kb on + strand, within AO356_17990 at 4060.320 kb on + strand, within AO356_17990 at 4060.320 kb on + strand, within AO356_17990 at 4060.320 kb on + strand, within AO356_17990 at 4060.320 kb on + strand, within AO356_17990 at 4060.320 kb on + strand, within AO356_17990 at 4060.320 kb on + strand, within AO356_17990 at 4060.320 kb on + strand, within AO356_17990 at 4060.320 kb on + strand, within AO356_17990 at 4060.320 kb on + strand, within AO356_17990 at 4060.321 kb on - strand, within AO356_17990 at 4060.321 kb on - strand, within AO356_17990 at 4060.321 kb on - strand, within AO356_17990 at 4060.321 kb on - strand, within AO356_17990 at 4060.321 kb on - strand, within AO356_17990 at 4060.321 kb on - strand, within AO356_17990 at 4060.321 kb on - strand, within AO356_17990 at 4060.321 kb on - strand, within AO356_17990 at 4060.321 kb on - strand, within AO356_17990 at 4060.321 kb on - strand, within AO356_17990 at 4060.321 kb on - strand, within AO356_17990 at 4060.395 kb on + strand, within AO356_17990 at 4060.396 kb on - strand, within AO356_17990 at 4060.404 kb on + strand, within AO356_17990 at 4060.404 kb on + strand, within AO356_17990 at 4060.404 kb on + strand, within AO356_17990 at 4060.404 kb on + strand, within AO356_17990 at 4060.404 kb on + strand, within AO356_17990 at 4060.404 kb on + strand, within AO356_17990 at 4060.404 kb on + strand, within AO356_17990 at 4060.405 kb on - strand, within AO356_17990 at 4060.405 kb on - strand, within AO356_17990 at 4060.405 kb on - strand, within AO356_17990 at 4060.405 kb on - strand, within AO356_17990 at 4060.405 kb on - strand, within AO356_17990 at 4060.405 kb on - strand, within AO356_17990 at 4060.405 kb on - strand, within AO356_17990 at 4060.405 kb on - strand, within AO356_17990 at 4060.405 kb on - strand, within AO356_17990 at 4060.405 kb on - strand, within AO356_17990 at 4060.421 kb on + strand, within AO356_17990 at 4060.421 kb on + strand, within AO356_17990 at 4060.422 kb on - strand, within AO356_17990 at 4060.422 kb on - strand, within AO356_17990 at 4060.425 kb on - strand, within AO356_17990 at 4060.425 kb on - strand, within AO356_17990 at 4060.425 kb on - strand, within AO356_17990 at 4060.499 kb on + strand, within AO356_17990 at 4060.623 kb on + strand at 4060.623 kb on + strand at 4060.624 kb on - strand at 4060.624 kb on - strand at 4060.626 kb on + strand at 4060.626 kb on + strand at 4060.627 kb on - strand at 4060.627 kb on - strand at 4060.640 kb on + strand at 4060.640 kb on + strand at 4060.640 kb on + strand at 4060.640 kb on + strand at 4060.640 kb on + strand at 4060.640 kb on + strand at 4060.640 kb on + strand at 4060.640 kb on + strand at 4060.640 kb on + strand at 4060.641 kb on - strand at 4060.641 kb on - strand at 4060.641 kb on - strand at 4060.641 kb on - strand at 4060.641 kb on - strand at 4060.641 kb on - strand at 4060.641 kb on - strand at 4060.641 kb on - strand at 4060.641 kb on - strand at 4060.641 kb on - strand at 4060.641 kb on - strand at 4060.702 kb on + strand at 4060.702 kb on + strand at 4060.703 kb on - strand at 4060.703 kb on - strand at 4060.713 kb on - strand at 4060.713 kb on - strand at 4060.744 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 4,058,180 + +0.3 4,058,191 + +0.2 4,058,286 + +0.8 4,058,287 - +0.0 4,058,287 - -1.3 4,058,287 - +0.6 4,058,287 - -0.1 4,058,432 - +0.1 4,058,449 + +0.3 4,058,449 + +0.4 4,058,450 - -1.6 4,058,450 - +0.8 4,058,450 - +0.1 4,058,450 - +0.3 4,058,602 + AO356_17975 0.38 -0.1 4,058,602 + AO356_17975 0.38 -0.1 4,058,602 + AO356_17975 0.38 -0.3 4,058,603 - AO356_17975 0.38 +0.9 4,058,603 - AO356_17975 0.38 -0.2 4,058,603 - AO356_17975 0.38 +0.2 4,058,683 + AO356_17975 0.57 +0.2 4,058,683 + AO356_17975 0.57 -0.9 4,058,683 + AO356_17975 0.57 +0.4 4,058,683 + AO356_17975 0.57 -1.0 4,058,683 + AO356_17975 0.57 +0.5 4,058,683 + AO356_17975 0.57 -0.1 4,058,684 - AO356_17975 0.58 -0.2 4,058,684 - AO356_17975 0.58 -0.4 4,058,684 - AO356_17975 0.58 +0.6 4,058,688 - AO356_17975 0.58 +0.6 4,058,688 - AO356_17975 0.58 -0.6 4,058,688 - AO356_17975 0.58 +0.1 4,058,688 - AO356_17975 0.58 +0.6 4,058,784 + AO356_17975 0.81 +0.7 4,058,784 + AO356_17975 0.81 +0.3 4,058,784 + AO356_17975 0.81 -0.5 4,058,784 + AO356_17975 0.81 -0.1 4,058,785 - AO356_17975 0.81 -0.3 4,058,785 - AO356_17975 0.81 +0.5 4,058,785 - AO356_17975 0.81 +0.9 4,058,785 - AO356_17975 0.81 +0.1 4,058,785 - AO356_17975 0.81 +0.7 4,058,785 - AO356_17975 0.81 +0.5 4,058,785 - AO356_17975 0.81 -0.2 4,058,786 + AO356_17975 0.81 +0.4 4,058,786 + AO356_17975 0.81 -0.4 4,058,786 + AO356_17975 0.81 -1.0 4,058,786 + AO356_17975 0.81 +1.0 4,058,786 + AO356_17975 0.81 +0.1 4,058,786 + AO356_17975 0.81 -0.8 4,058,786 + AO356_17975 0.81 +0.6 4,058,786 + AO356_17975 0.81 -0.3 4,058,786 + AO356_17975 0.81 -0.1 4,058,786 + AO356_17975 0.81 +0.4 4,058,786 + AO356_17975 0.81 +0.5 4,058,786 + AO356_17975 0.81 +0.2 4,058,786 + AO356_17975 0.81 +0.5 4,058,786 + AO356_17975 0.81 +0.5 4,058,786 + AO356_17975 0.81 +0.3 4,058,786 + AO356_17975 0.81 -0.3 4,058,786 + AO356_17975 0.81 -1.0 4,058,786 + AO356_17975 0.81 +0.3 4,058,786 + AO356_17975 0.81 +0.6 4,058,787 - AO356_17975 0.82 +0.5 4,058,787 - AO356_17975 0.82 +0.3 4,058,787 - AO356_17975 0.82 -0.5 4,058,787 - AO356_17975 0.82 +1.3 4,058,787 - AO356_17975 0.82 +0.3 4,058,787 - AO356_17975 0.82 +1.2 4,058,787 - AO356_17975 0.82 +0.6 4,059,069 + -0.0 4,059,069 + +0.1 4,059,070 - -1.0 4,059,070 - +0.3 4,059,070 - +0.6 4,059,075 + +0.1 4,059,103 + +0.2 4,059,378 + AO356_17985 0.37 -2.2 4,059,378 + AO356_17985 0.37 +0.9 4,059,378 + AO356_17985 0.37 -0.7 4,059,378 + AO356_17985 0.37 +0.5 4,059,379 - AO356_17985 0.37 +0.9 4,059,379 - AO356_17985 0.37 -1.0 4,059,379 - AO356_17985 0.37 -0.7 4,059,379 - AO356_17985 0.37 -0.1 4,059,379 - AO356_17985 0.37 -2.0 4,059,414 + AO356_17985 0.43 -0.1 4,059,414 + AO356_17985 0.43 -1.5 4,059,629 + AO356_17985 0.79 -0.4 4,059,648 + AO356_17985 0.82 -0.5 4,059,648 + AO356_17985 0.82 -1.0 4,059,648 + AO356_17985 0.82 -2.1 4,059,648 + AO356_17985 0.82 -2.0 4,059,648 + AO356_17985 0.82 -0.5 4,059,648 + AO356_17985 0.82 -1.3 4,059,649 - AO356_17985 0.82 +0.9 4,059,649 - AO356_17985 0.82 -1.3 4,059,649 - AO356_17985 0.82 +0.6 4,059,649 - AO356_17985 0.82 +1.4 4,059,649 - AO356_17985 0.82 -0.9 4,059,672 + AO356_17985 0.86 -1.7 4,059,672 + AO356_17985 0.86 -0.3 4,059,672 + AO356_17985 0.86 -0.3 4,059,697 + -0.7 4,059,844 + +2.9 4,059,845 - +0.7 4,059,845 - +1.5 4,059,858 + -0.0 4,059,858 + +0.3 4,059,858 + -1.9 4,059,858 + +0.3 4,059,859 - -0.3 4,059,859 - +0.3 4,059,866 - +1.1 4,059,901 + +0.6 4,059,902 - -0.3 4,059,902 - +0.0 4,059,902 - +0.0 4,059,905 + +0.1 4,059,905 + -1.5 4,059,906 - -1.0 4,060,040 - +0.7 4,060,087 - +0.3 4,060,103 + -0.0 4,060,104 - +0.3 4,060,138 + +0.0 4,060,138 + -0.6 4,060,138 + -0.2 4,060,138 + -1.0 4,060,233 + AO356_17990 0.17 -0.1 4,060,233 + AO356_17990 0.17 +0.1 4,060,233 + AO356_17990 0.17 +1.4 4,060,233 + AO356_17990 0.17 +0.6 4,060,233 + AO356_17990 0.17 -1.0 4,060,233 + AO356_17990 0.17 -0.5 4,060,233 + AO356_17990 0.17 -0.8 4,060,233 + AO356_17990 0.17 +0.7 4,060,233 + AO356_17990 0.17 +0.3 4,060,234 - AO356_17990 0.17 -0.4 4,060,234 - AO356_17990 0.17 -0.6 4,060,234 - AO356_17990 0.17 +0.1 4,060,234 - AO356_17990 0.17 +0.4 4,060,234 - AO356_17990 0.17 -0.0 4,060,234 - AO356_17990 0.17 -0.3 4,060,234 - AO356_17990 0.17 -1.4 4,060,234 - AO356_17990 0.17 -1.3 4,060,234 - AO356_17990 0.17 -0.3 4,060,234 - AO356_17990 0.17 -0.1 4,060,234 - AO356_17990 0.17 +0.4 4,060,234 - AO356_17990 0.17 -0.1 4,060,234 - AO356_17990 0.17 +0.7 4,060,234 - AO356_17990 0.17 -0.0 4,060,234 - AO356_17990 0.17 +0.0 4,060,242 + AO356_17990 0.18 +0.7 4,060,243 - AO356_17990 0.19 +0.4 4,060,320 + AO356_17990 0.35 +0.5 4,060,320 + AO356_17990 0.35 +1.0 4,060,320 + AO356_17990 0.35 -0.3 4,060,320 + AO356_17990 0.35 +0.6 4,060,320 + AO356_17990 0.35 -0.5 4,060,320 + AO356_17990 0.35 +0.1 4,060,320 + AO356_17990 0.35 +0.2 4,060,320 + AO356_17990 0.35 +0.3 4,060,320 + AO356_17990 0.35 +0.9 4,060,320 + AO356_17990 0.35 -0.9 4,060,320 + AO356_17990 0.35 +0.8 4,060,321 - AO356_17990 0.35 +0.1 4,060,321 - AO356_17990 0.35 +0.5 4,060,321 - AO356_17990 0.35 +0.5 4,060,321 - AO356_17990 0.35 -1.0 4,060,321 - AO356_17990 0.35 +0.6 4,060,321 - AO356_17990 0.35 +0.1 4,060,321 - AO356_17990 0.35 +0.6 4,060,321 - AO356_17990 0.35 -0.4 4,060,321 - AO356_17990 0.35 +0.3 4,060,321 - AO356_17990 0.35 +0.5 4,060,321 - AO356_17990 0.35 -0.2 4,060,395 + AO356_17990 0.51 -0.8 4,060,396 - AO356_17990 0.51 -0.7 4,060,404 + AO356_17990 0.53 +0.1 4,060,404 + AO356_17990 0.53 -0.4 4,060,404 + AO356_17990 0.53 -0.6 4,060,404 + AO356_17990 0.53 +0.1 4,060,404 + AO356_17990 0.53 +0.5 4,060,404 + AO356_17990 0.53 -1.1 4,060,404 + AO356_17990 0.53 +0.8 4,060,405 - AO356_17990 0.53 +1.0 4,060,405 - AO356_17990 0.53 -0.7 4,060,405 - AO356_17990 0.53 +0.9 4,060,405 - AO356_17990 0.53 -0.4 4,060,405 - AO356_17990 0.53 -1.6 4,060,405 - AO356_17990 0.53 +0.7 4,060,405 - AO356_17990 0.53 +1.0 4,060,405 - AO356_17990 0.53 -0.7 4,060,405 - AO356_17990 0.53 +0.0 4,060,405 - AO356_17990 0.53 -0.5 4,060,421 + AO356_17990 0.56 -0.3 4,060,421 + AO356_17990 0.56 -0.7 4,060,422 - AO356_17990 0.57 +0.8 4,060,422 - AO356_17990 0.57 +0.3 4,060,425 - AO356_17990 0.57 +0.4 4,060,425 - AO356_17990 0.57 +0.7 4,060,425 - AO356_17990 0.57 -0.0 4,060,499 + AO356_17990 0.73 +0.7 4,060,623 + +0.2 4,060,623 + +0.7 4,060,624 - -0.5 4,060,624 - -0.9 4,060,626 + -1.3 4,060,626 + -0.1 4,060,627 - +0.3 4,060,627 - -0.4 4,060,640 + +0.3 4,060,640 + -0.2 4,060,640 + +0.3 4,060,640 + +0.1 4,060,640 + -0.1 4,060,640 + -1.0 4,060,640 + +0.3 4,060,640 + +1.2 4,060,640 + +0.5 4,060,641 - +0.5 4,060,641 - -1.0 4,060,641 - +0.2 4,060,641 - +0.1 4,060,641 - +0.1 4,060,641 - +0.6 4,060,641 - -0.2 4,060,641 - -0.7 4,060,641 - +0.6 4,060,641 - +0.6 4,060,641 - -0.0 4,060,702 + +0.8 4,060,702 + +0.5 4,060,703 - -0.1 4,060,703 - -0.8 4,060,713 - -0.1 4,060,713 - -0.1 4,060,744 + -0.7
Or see this region's nucleotide sequence