Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07335 and AO356_07340 are separated by 288 nucleotides AO356_07340 and AO356_07345 are separated by 20 nucleotides AO356_07345 and AO356_07350 are separated by 101 nucleotides
AO356_07335: AO356_07335 - fructose-specific PTS system (fructose 1-phosphate forming), EI, Hpr, and EII-A components (from data) , at 1,623,345 to 1,626,209
_07335
AO356_07340: AO356_07340 - transcriptional regulator, at 1,626,498 to 1,627,493
_07340
AO356_07345: AO356_07345 - hydrolase TatD, at 1,627,514 to 1,628,290
_07345
AO356_07350: AO356_07350 - chemotaxis protein, at 1,628,392 to 1,630,422
_07350
Position (kb)
1626
1627
1628 Strain fitness (log2 ratio)
-1
0
1 at 1625.929 kb on + strand at 1625.930 kb on - strand at 1625.995 kb on + strand at 1625.995 kb on + strand at 1625.995 kb on + strand at 1625.995 kb on + strand at 1625.996 kb on - strand at 1625.996 kb on - strand at 1625.996 kb on - strand at 1626.038 kb on + strand at 1626.038 kb on + strand at 1626.038 kb on + strand at 1626.039 kb on - strand at 1626.039 kb on - strand at 1626.039 kb on - strand at 1626.039 kb on - strand at 1626.094 kb on + strand at 1626.095 kb on - strand at 1626.095 kb on - strand at 1626.158 kb on + strand at 1626.158 kb on + strand at 1626.192 kb on + strand at 1626.193 kb on - strand at 1626.193 kb on - strand at 1626.244 kb on + strand at 1626.245 kb on - strand at 1626.245 kb on - strand at 1626.266 kb on + strand at 1626.267 kb on - strand at 1626.357 kb on - strand at 1626.357 kb on - strand at 1626.512 kb on + strand at 1626.512 kb on + strand at 1626.512 kb on + strand at 1626.513 kb on - strand at 1626.513 kb on - strand at 1626.552 kb on + strand at 1626.552 kb on + strand at 1626.552 kb on + strand at 1626.552 kb on + strand at 1626.552 kb on + strand at 1626.552 kb on + strand at 1626.552 kb on + strand at 1626.552 kb on + strand at 1626.552 kb on + strand at 1626.552 kb on + strand at 1626.552 kb on + strand at 1626.553 kb on - strand at 1626.553 kb on - strand at 1626.553 kb on - strand at 1626.553 kb on - strand at 1626.723 kb on + strand, within AO356_07340 at 1626.723 kb on + strand, within AO356_07340 at 1626.723 kb on + strand, within AO356_07340 at 1626.724 kb on - strand, within AO356_07340 at 1626.724 kb on - strand, within AO356_07340 at 1626.724 kb on - strand, within AO356_07340 at 1626.897 kb on + strand, within AO356_07340 at 1626.897 kb on + strand, within AO356_07340 at 1626.898 kb on - strand, within AO356_07340 at 1626.898 kb on - strand, within AO356_07340 at 1626.898 kb on - strand, within AO356_07340 at 1626.898 kb on - strand, within AO356_07340 at 1626.923 kb on - strand, within AO356_07340 at 1627.239 kb on + strand, within AO356_07340 at 1627.239 kb on + strand, within AO356_07340 at 1627.239 kb on + strand, within AO356_07340 at 1627.239 kb on + strand, within AO356_07340 at 1627.239 kb on + strand, within AO356_07340 at 1627.239 kb on + strand, within AO356_07340 at 1627.240 kb on - strand, within AO356_07340 at 1627.240 kb on - strand, within AO356_07340 at 1627.240 kb on - strand, within AO356_07340 at 1627.240 kb on - strand, within AO356_07340 at 1627.240 kb on - strand, within AO356_07340 at 1627.240 kb on - strand, within AO356_07340 at 1627.240 kb on - strand, within AO356_07340 at 1627.240 kb on - strand, within AO356_07340 at 1627.240 kb on - strand, within AO356_07340 at 1627.240 kb on - strand, within AO356_07340 at 1627.240 kb on - strand, within AO356_07340 at 1627.301 kb on - strand, within AO356_07340 at 1627.434 kb on + strand at 1627.434 kb on + strand at 1627.434 kb on + strand at 1627.817 kb on + strand, within AO356_07345 at 1627.817 kb on + strand, within AO356_07345 at 1627.817 kb on + strand, within AO356_07345 at 1627.818 kb on - strand, within AO356_07345 at 1627.818 kb on - strand, within AO356_07345 at 1627.818 kb on - strand, within AO356_07345 at 1627.818 kb on - strand, within AO356_07345 at 1627.820 kb on + strand, within AO356_07345 at 1627.820 kb on + strand, within AO356_07345 at 1627.820 kb on + strand, within AO356_07345 at 1627.820 kb on + strand, within AO356_07345 at 1627.820 kb on + strand, within AO356_07345 at 1627.820 kb on + strand, within AO356_07345 at 1627.820 kb on + strand, within AO356_07345 at 1627.820 kb on + strand, within AO356_07345 at 1627.821 kb on - strand, within AO356_07345 at 1627.821 kb on - strand, within AO356_07345 at 1627.821 kb on - strand, within AO356_07345 at 1627.821 kb on - strand, within AO356_07345 at 1627.821 kb on - strand, within AO356_07345 at 1628.288 kb on + strand at 1628.328 kb on + strand at 1628.328 kb on + strand at 1628.328 kb on + strand at 1628.328 kb on + strand at 1628.393 kb on + strand at 1628.394 kb on - strand at 1628.394 kb on - strand at 1628.394 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 1,625,929 + -0.6 1,625,930 - -0.2 1,625,995 + +0.4 1,625,995 + -0.1 1,625,995 + +0.4 1,625,995 + -0.6 1,625,996 - +0.2 1,625,996 - -0.1 1,625,996 - -0.1 1,626,038 + -0.3 1,626,038 + +0.6 1,626,038 + +0.3 1,626,039 - +0.4 1,626,039 - +0.0 1,626,039 - +0.7 1,626,039 - -0.5 1,626,094 + -1.6 1,626,095 - -0.0 1,626,095 - +0.3 1,626,158 + +0.2 1,626,158 + -0.1 1,626,192 + +1.3 1,626,193 - +0.7 1,626,193 - -0.3 1,626,244 + -0.2 1,626,245 - -0.4 1,626,245 - -0.6 1,626,266 + +0.6 1,626,267 - -0.5 1,626,357 - +0.3 1,626,357 - -0.4 1,626,512 + +0.2 1,626,512 + -1.1 1,626,512 + -0.1 1,626,513 - +0.5 1,626,513 - -0.9 1,626,552 + +0.4 1,626,552 + +0.3 1,626,552 + -0.5 1,626,552 + +0.1 1,626,552 + -0.5 1,626,552 + -0.5 1,626,552 + -0.4 1,626,552 + +0.1 1,626,552 + +0.3 1,626,552 + -1.0 1,626,552 + +1.3 1,626,553 - -1.5 1,626,553 - -0.4 1,626,553 - -0.3 1,626,553 - -0.8 1,626,723 + AO356_07340 0.23 -0.2 1,626,723 + AO356_07340 0.23 +0.6 1,626,723 + AO356_07340 0.23 +0.3 1,626,724 - AO356_07340 0.23 -0.4 1,626,724 - AO356_07340 0.23 -0.7 1,626,724 - AO356_07340 0.23 +0.6 1,626,897 + AO356_07340 0.40 +0.1 1,626,897 + AO356_07340 0.40 -0.8 1,626,898 - AO356_07340 0.40 +0.1 1,626,898 - AO356_07340 0.40 -0.4 1,626,898 - AO356_07340 0.40 +0.8 1,626,898 - AO356_07340 0.40 +1.0 1,626,923 - AO356_07340 0.43 +0.5 1,627,239 + AO356_07340 0.74 -0.7 1,627,239 + AO356_07340 0.74 +0.4 1,627,239 + AO356_07340 0.74 -0.8 1,627,239 + AO356_07340 0.74 -0.5 1,627,239 + AO356_07340 0.74 +1.3 1,627,239 + AO356_07340 0.74 +0.2 1,627,240 - AO356_07340 0.74 +0.1 1,627,240 - AO356_07340 0.74 -0.3 1,627,240 - AO356_07340 0.74 -1.1 1,627,240 - AO356_07340 0.74 +1.2 1,627,240 - AO356_07340 0.74 -1.1 1,627,240 - AO356_07340 0.74 +0.1 1,627,240 - AO356_07340 0.74 +0.5 1,627,240 - AO356_07340 0.74 -0.2 1,627,240 - AO356_07340 0.74 +1.5 1,627,240 - AO356_07340 0.74 +0.4 1,627,240 - AO356_07340 0.74 -0.3 1,627,301 - AO356_07340 0.81 -0.9 1,627,434 + +0.3 1,627,434 + +1.0 1,627,434 + +0.9 1,627,817 + AO356_07345 0.39 -0.4 1,627,817 + AO356_07345 0.39 +0.8 1,627,817 + AO356_07345 0.39 +0.3 1,627,818 - AO356_07345 0.39 +0.7 1,627,818 - AO356_07345 0.39 -0.7 1,627,818 - AO356_07345 0.39 +0.6 1,627,818 - AO356_07345 0.39 +1.0 1,627,820 + AO356_07345 0.39 -0.4 1,627,820 + AO356_07345 0.39 -0.5 1,627,820 + AO356_07345 0.39 -0.4 1,627,820 + AO356_07345 0.39 -0.1 1,627,820 + AO356_07345 0.39 +0.3 1,627,820 + AO356_07345 0.39 -0.3 1,627,820 + AO356_07345 0.39 +0.4 1,627,820 + AO356_07345 0.39 +1.6 1,627,821 - AO356_07345 0.40 +0.5 1,627,821 - AO356_07345 0.40 +0.2 1,627,821 - AO356_07345 0.40 +0.3 1,627,821 - AO356_07345 0.40 -0.0 1,627,821 - AO356_07345 0.40 +0.4 1,628,288 + -1.6 1,628,328 + +0.3 1,628,328 + +0.2 1,628,328 + -0.5 1,628,328 + +0.1 1,628,393 + +0.1 1,628,394 - +1.0 1,628,394 - +0.6 1,628,394 - +0.8
Or see this region's nucleotide sequence