Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_05150 and AO356_05155 are separated by 17 nucleotides AO356_05155 and AO356_05160 overlap by 14 nucleotides AO356_05160 and AO356_05165 are separated by 187 nucleotides
AO356_05150: AO356_05150 - keto-deoxy-phosphogluconate aldolase, at 1,155,592 to 1,156,257
_05150
AO356_05155: AO356_05155 - 6-phosphogluconolactonase, at 1,156,275 to 1,156,988
_05155
AO356_05160: AO356_05160 - glucose-6-phosphate dehydrogenase, at 1,156,975 to 1,158,444
_05160
AO356_05165: AO356_05165 - transcriptional regulator, at 1,158,632 to 1,159,501
_05165
Position (kb)
1156
1157
1158
1159 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1156.289 kb on - strand at 1156.981 kb on - strand at 1156.989 kb on - strand at 1157.190 kb on - strand, within AO356_05160 at 1157.217 kb on - strand, within AO356_05160 at 1157.379 kb on - strand, within AO356_05160 at 1157.379 kb on - strand, within AO356_05160 at 1157.379 kb on - strand, within AO356_05160 at 1157.379 kb on - strand, within AO356_05160 at 1157.379 kb on - strand, within AO356_05160 at 1157.589 kb on - strand, within AO356_05160 at 1157.589 kb on - strand, within AO356_05160 at 1157.651 kb on - strand, within AO356_05160 at 1157.778 kb on - strand, within AO356_05160 at 1157.838 kb on - strand, within AO356_05160 at 1157.838 kb on - strand, within AO356_05160 at 1157.838 kb on - strand, within AO356_05160 at 1157.838 kb on - strand, within AO356_05160 at 1157.919 kb on - strand, within AO356_05160 at 1157.938 kb on - strand, within AO356_05160 at 1157.938 kb on - strand, within AO356_05160 at 1158.078 kb on - strand, within AO356_05160 at 1158.078 kb on - strand, within AO356_05160 at 1158.078 kb on - strand, within AO356_05160 at 1158.078 kb on - strand, within AO356_05160 at 1158.150 kb on - strand, within AO356_05160 at 1158.183 kb on - strand, within AO356_05160 at 1158.183 kb on - strand, within AO356_05160 at 1158.183 kb on - strand, within AO356_05160 at 1158.243 kb on - strand, within AO356_05160 at 1158.357 kb on - strand at 1158.357 kb on - strand at 1158.512 kb on + strand at 1158.576 kb on + strand at 1158.577 kb on - strand at 1158.577 kb on - strand at 1158.602 kb on - strand at 1158.620 kb on + strand at 1158.621 kb on - strand at 1158.621 kb on - strand at 1158.621 kb on - strand at 1158.631 kb on + strand at 1158.631 kb on + strand at 1158.631 kb on + strand at 1158.631 kb on + strand at 1158.631 kb on + strand at 1158.632 kb on - strand at 1158.652 kb on - strand at 1158.881 kb on + strand, within AO356_05165 at 1158.881 kb on + strand, within AO356_05165 at 1158.881 kb on + strand, within AO356_05165 at 1158.882 kb on - strand, within AO356_05165 at 1158.882 kb on - strand, within AO356_05165 at 1158.882 kb on - strand, within AO356_05165 at 1158.897 kb on + strand, within AO356_05165 at 1158.923 kb on + strand, within AO356_05165 at 1158.923 kb on - strand, within AO356_05165 at 1158.924 kb on - strand, within AO356_05165 at 1158.924 kb on - strand, within AO356_05165 at 1158.925 kb on + strand, within AO356_05165 at 1159.194 kb on - strand, within AO356_05165 at 1159.194 kb on - strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.343 kb on + strand, within AO356_05165 at 1159.344 kb on - strand, within AO356_05165 at 1159.344 kb on - strand, within AO356_05165 at 1159.344 kb on - strand, within AO356_05165 at 1159.344 kb on - strand, within AO356_05165 at 1159.344 kb on - strand, within AO356_05165 at 1159.344 kb on - strand, within AO356_05165 at 1159.344 kb on - strand, within AO356_05165 at 1159.344 kb on - strand, within AO356_05165 at 1159.344 kb on - strand, within AO356_05165 at 1159.344 kb on - strand, within AO356_05165 at 1159.344 kb on - strand, within AO356_05165 at 1159.344 kb on - strand, within AO356_05165 at 1159.344 kb on - strand, within AO356_05165 at 1159.344 kb on - strand, within AO356_05165 at 1159.344 kb on - strand, within AO356_05165 at 1159.344 kb on - strand, within AO356_05165 at 1159.344 kb on - strand, within AO356_05165 at 1159.344 kb on - strand, within AO356_05165 at 1159.344 kb on - strand, within AO356_05165 at 1159.345 kb on + strand, within AO356_05165 at 1159.345 kb on + strand, within AO356_05165 at 1159.345 kb on + strand, within AO356_05165 at 1159.346 kb on - strand, within AO356_05165
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 1,156,289 - -2.1 1,156,981 - -2.1 1,156,989 - -0.8 1,157,190 - AO356_05160 0.15 -2.9 1,157,217 - AO356_05160 0.16 -3.3 1,157,379 - AO356_05160 0.27 -2.8 1,157,379 - AO356_05160 0.27 -1.5 1,157,379 - AO356_05160 0.27 -0.3 1,157,379 - AO356_05160 0.27 -3.7 1,157,379 - AO356_05160 0.27 -3.1 1,157,589 - AO356_05160 0.42 -2.1 1,157,589 - AO356_05160 0.42 -1.0 1,157,651 - AO356_05160 0.46 -3.4 1,157,778 - AO356_05160 0.55 -3.3 1,157,838 - AO356_05160 0.59 -3.0 1,157,838 - AO356_05160 0.59 -1.4 1,157,838 - AO356_05160 0.59 -1.9 1,157,838 - AO356_05160 0.59 -3.4 1,157,919 - AO356_05160 0.64 -1.7 1,157,938 - AO356_05160 0.66 -2.3 1,157,938 - AO356_05160 0.66 -3.0 1,158,078 - AO356_05160 0.75 -0.6 1,158,078 - AO356_05160 0.75 -3.3 1,158,078 - AO356_05160 0.75 -3.1 1,158,078 - AO356_05160 0.75 -2.8 1,158,150 - AO356_05160 0.80 -2.4 1,158,183 - AO356_05160 0.82 -4.0 1,158,183 - AO356_05160 0.82 -4.1 1,158,183 - AO356_05160 0.82 -2.9 1,158,243 - AO356_05160 0.86 -2.2 1,158,357 - -1.9 1,158,357 - -2.7 1,158,512 + -3.0 1,158,576 + -2.6 1,158,577 - +0.3 1,158,577 - -0.0 1,158,602 - +0.2 1,158,620 + -2.3 1,158,621 - +0.6 1,158,621 - +1.6 1,158,621 - -1.2 1,158,631 + -3.4 1,158,631 + -1.4 1,158,631 + -3.8 1,158,631 + -3.2 1,158,631 + -1.4 1,158,632 - +0.4 1,158,652 - +0.5 1,158,881 + AO356_05165 0.29 -0.6 1,158,881 + AO356_05165 0.29 -3.0 1,158,881 + AO356_05165 0.29 -2.4 1,158,882 - AO356_05165 0.29 +0.3 1,158,882 - AO356_05165 0.29 +0.3 1,158,882 - AO356_05165 0.29 +0.3 1,158,897 + AO356_05165 0.30 -1.9 1,158,923 + AO356_05165 0.33 -2.6 1,158,923 - AO356_05165 0.33 +1.1 1,158,924 - AO356_05165 0.34 -1.7 1,158,924 - AO356_05165 0.34 +0.8 1,158,925 + AO356_05165 0.34 -1.7 1,159,194 - AO356_05165 0.65 -0.3 1,159,194 - AO356_05165 0.65 +0.3 1,159,343 + AO356_05165 0.82 -0.8 1,159,343 + AO356_05165 0.82 +0.7 1,159,343 + AO356_05165 0.82 -0.2 1,159,343 + AO356_05165 0.82 -0.6 1,159,343 + AO356_05165 0.82 +0.6 1,159,343 + AO356_05165 0.82 +0.6 1,159,343 + AO356_05165 0.82 +1.8 1,159,343 + AO356_05165 0.82 +0.5 1,159,343 + AO356_05165 0.82 -0.8 1,159,343 + AO356_05165 0.82 +0.0 1,159,343 + AO356_05165 0.82 +0.2 1,159,343 + AO356_05165 0.82 -0.9 1,159,343 + AO356_05165 0.82 +0.1 1,159,343 + AO356_05165 0.82 -0.2 1,159,343 + AO356_05165 0.82 -0.3 1,159,343 + AO356_05165 0.82 -0.5 1,159,343 + AO356_05165 0.82 -1.2 1,159,343 + AO356_05165 0.82 -0.2 1,159,343 + AO356_05165 0.82 -1.1 1,159,343 + AO356_05165 0.82 -1.3 1,159,343 + AO356_05165 0.82 +0.0 1,159,343 + AO356_05165 0.82 -0.2 1,159,343 + AO356_05165 0.82 -1.7 1,159,343 + AO356_05165 0.82 +0.1 1,159,343 + AO356_05165 0.82 -0.2 1,159,343 + AO356_05165 0.82 -0.9 1,159,343 + AO356_05165 0.82 -0.2 1,159,343 + AO356_05165 0.82 -2.4 1,159,344 - AO356_05165 0.82 -0.2 1,159,344 - AO356_05165 0.82 +0.7 1,159,344 - AO356_05165 0.82 +0.1 1,159,344 - AO356_05165 0.82 -0.4 1,159,344 - AO356_05165 0.82 -0.5 1,159,344 - AO356_05165 0.82 +1.5 1,159,344 - AO356_05165 0.82 -0.5 1,159,344 - AO356_05165 0.82 -0.6 1,159,344 - AO356_05165 0.82 +0.3 1,159,344 - AO356_05165 0.82 +0.1 1,159,344 - AO356_05165 0.82 +0.9 1,159,344 - AO356_05165 0.82 -0.4 1,159,344 - AO356_05165 0.82 -0.4 1,159,344 - AO356_05165 0.82 +0.5 1,159,344 - AO356_05165 0.82 -0.1 1,159,344 - AO356_05165 0.82 +0.1 1,159,344 - AO356_05165 0.82 +1.5 1,159,344 - AO356_05165 0.82 -0.8 1,159,344 - AO356_05165 0.82 +0.1 1,159,345 + AO356_05165 0.82 +0.1 1,159,345 + AO356_05165 0.82 -0.3 1,159,345 + AO356_05165 0.82 -0.1 1,159,346 - AO356_05165 0.82 +0.2
Or see this region's nucleotide sequence