Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3290

Experiment: Choline Lysine 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 10 mM
3,418,705	+		Ga0059261_3288	0.33	+0.5
3,418,705	+		Ga0059261_3288	0.33	-1.8
3,418,705	+				+0.8
3,418,705	+		Ga0059261_3288	0.33	+0.1
3,418,706	-		Ga0059261_3288	0.33	+0.1
3,418,706	-		Ga0059261_3288	0.33	-0.5
3,418,706	-		Ga0059261_3288	0.33	-0.7
3,418,706	-		Ga0059261_3288	0.33	+0.6
3,418,706	-				+0.2
3,418,706	-		Ga0059261_3288	0.33	-0.2
3,418,706	-		Ga0059261_3288	0.33	-0.1
3,418,920	+		Ga0059261_3288	0.56	+0.7
3,418,920	+		Ga0059261_3288	0.56	-0.2
3,418,920	+		Ga0059261_3288	0.56	+1.0
3,418,920	+		Ga0059261_3288	0.56	+0.5
3,418,921	-		Ga0059261_3288	0.56	-1.2
3,418,921	-		Ga0059261_3288	0.56	+0.1
3,418,921	-		Ga0059261_3288	0.56	-0.1
3,418,921	-		Ga0059261_3288	0.56	+0.0
3,418,921	-		Ga0059261_3288	0.56	+0.2
3,418,921	-		Ga0059261_3288	0.56	+1.2
3,418,921	-		Ga0059261_3288	0.56	-0.1
3,418,932	+		Ga0059261_3288	0.57	-0.4
3,418,933	-		Ga0059261_3288	0.57	+0.1
3,418,933	-		Ga0059261_3288	0.57	+0.0
3,418,986	+		Ga0059261_3288	0.63	-0.1
3,418,986	+		Ga0059261_3288	0.63	-0.0
3,418,986	+		Ga0059261_3288	0.63	+0.3
3,418,986	+		Ga0059261_3288	0.63	+0.1
3,418,986	+		Ga0059261_3288	0.63	-0.1
3,418,986	+		Ga0059261_3288	0.63	-0.0
3,418,987	-		Ga0059261_3288	0.63	-0.1
3,418,987	-		Ga0059261_3288	0.63	+0.1
3,418,987	-		Ga0059261_3288	0.63	-1.7
3,418,987	-		Ga0059261_3288	0.63	-0.0
3,418,987	-		Ga0059261_3288	0.63	-0.8
3,418,987	-		Ga0059261_3288	0.63	+0.6
3,418,987	-		Ga0059261_3288	0.63	-0.5
3,418,987	-		Ga0059261_3288	0.63	+1.1
3,419,061	+		Ga0059261_3288	0.71	+1.2
3,419,062	-		Ga0059261_3288	0.71	+0.4
3,419,139	+		Ga0059261_3288	0.79	-0.0
3,419,140	-		Ga0059261_3288	0.79	+0.5
3,419,140	-		Ga0059261_3288	0.79	+0.4
3,419,140	-		Ga0059261_3288	0.79	+0.2
3,419,391	-				-1.8
3,419,391	-				+0.1
3,419,391	-				+0.3
3,419,395	+				+0.1
3,419,395	+				+0.4
3,419,395	+				+0.2
3,419,396	-				-0.0
3,419,396	-				-1.2
3,419,396	-				-0.1
3,419,507	-		Ga0059261_3289	0.46	-0.5
3,419,550	+		Ga0059261_3289	0.62	+2.0
3,419,550	+		Ga0059261_3289	0.62	+1.2
3,419,703	+				-0.1
3,419,703	+				+1.8
3,419,703	+				-0.5
3,419,703	+				-1.2
3,419,703	+				+1.5
3,419,703	+				+0.5
3,419,703	+				-0.1
3,419,998	+				+0.1
3,419,998	+				-0.0
3,419,998	+				-1.5
3,419,998	+				+0.5
3,419,999	-				+1.1
3,419,999	-				+1.2
3,420,051	+				+0.1
3,420,051	+				-0.0
3,420,051	+				-0.2
3,420,051	+				-1.1
3,420,051	+				-0.2
3,420,052	-				+0.2
3,420,052	-				-0.2
3,420,066	-				-0.2
3,420,203	+				+0.1
3,420,203	+				+0.2
3,420,203	+				+0.8
3,420,243	+				-0.7
3,420,243	+				+0.0
3,420,244	-				-0.2
3,420,244	-				-0.5
3,420,244	-				-0.1
3,420,244	-				+0.2
3,420,244	-				-0.2
3,420,322	+		Ga0059261_3291	0.25	-0.5
3,420,322	+		Ga0059261_3291	0.25	-2.2
3,420,323	-		Ga0059261_3291	0.25	-0.4
3,420,323	-		Ga0059261_3291	0.25	+0.1
3,420,323	-		Ga0059261_3291	0.25	-0.3
3,420,323	-		Ga0059261_3291	0.25	-0.1
3,420,323	-				-1.2
3,420,361	+		Ga0059261_3291	0.35	+1.5
3,420,361	+		Ga0059261_3291	0.35	-0.3
3,420,361	+		Ga0059261_3291	0.35	+0.1
3,420,362	-		Ga0059261_3291	0.35	+0.4
3,420,362	-		Ga0059261_3291	0.35	+0.6
3,420,362	-		Ga0059261_3291	0.35	+0.1
3,420,362	-		Ga0059261_3291	0.35	-0.3
3,420,406	+		Ga0059261_3291	0.46	+1.8
3,420,406	+		Ga0059261_3291	0.46	-0.2
3,420,406	+		Ga0059261_3291	0.46	-0.8
3,420,406	+		Ga0059261_3291	0.46	-0.8
3,420,406	+		Ga0059261_3291	0.46	+1.8
3,420,406	+		Ga0059261_3291	0.46	-1.1
3,420,407	-		Ga0059261_3291	0.46	-0.4
3,420,407	-		Ga0059261_3291	0.46	-0.4
3,420,407	-		Ga0059261_3291	0.46	-0.2
3,420,407	-		Ga0059261_3291	0.46	-0.7
3,420,409	+		Ga0059261_3291	0.47	+1.3
3,420,409	+		Ga0059261_3291	0.47	-0.4
3,420,409	+		Ga0059261_3291	0.47	+0.5
3,420,409	+		Ga0059261_3291	0.47	+0.1
3,420,410	-		Ga0059261_3291	0.47	+0.7
3,420,410	-		Ga0059261_3291	0.47	+0.1
3,420,457	+		Ga0059261_3291	0.59	-0.5
3,420,457	+		Ga0059261_3291	0.59	+0.4
3,420,458	-		Ga0059261_3291	0.59	+1.3
3,420,458	-		Ga0059261_3291	0.59	-0.1
3,420,458	-		Ga0059261_3291	0.59	-0.2
3,420,458	-		Ga0059261_3291	0.59	-0.1
3,420,458	-		Ga0059261_3291	0.59	+0.3
3,420,535	+		Ga0059261_3291	0.78	-0.4
3,420,535	+		Ga0059261_3291	0.78	+0.8
3,420,535	+		Ga0059261_3291	0.78	+0.3
3,420,535	+		Ga0059261_3291	0.78	-0.3
3,420,535	+		Ga0059261_3291	0.78	+0.5
3,420,535	+		Ga0059261_3291	0.78	-0.0
3,420,536	-		Ga0059261_3291	0.78	+0.6
3,420,536	-		Ga0059261_3291	0.78	-0.6
3,420,536	-		Ga0059261_3291	0.78	-0.1
3,420,536	-		Ga0059261_3291	0.78	+0.5
3,420,536	-		Ga0059261_3291	0.78	+0.5
3,420,536	-		Ga0059261_3291	0.78	-1.3
3,420,536	-		Ga0059261_3291	0.78	+0.0
3,420,536	-		Ga0059261_3291	0.78	+1.5
3,420,536	-		Ga0059261_3291	0.78	-0.8
3,420,536	-		Ga0059261_3291	0.78	+0.1
3,420,536	-		Ga0059261_3291	0.78	+1.1
3,420,556	+		Ga0059261_3291	0.83	-0.2
3,420,556	+		Ga0059261_3291	0.83	-0.7
3,420,556	+		Ga0059261_3291	0.83	-0.1
3,420,556	+		Ga0059261_3291	0.83	+0.5
3,420,556	+		Ga0059261_3291	0.83	+0.5
3,420,556	+		Ga0059261_3291	0.83	-0.0
3,420,556	+		Ga0059261_3291	0.83	+0.3
3,420,556	+		Ga0059261_3291	0.83	-0.9
3,420,557	-		Ga0059261_3291	0.84	+0.5
3,420,557	-		Ga0059261_3291	0.84	+0.1
3,420,557	-		Ga0059261_3291	0.84	+0.1
3,420,557	-		Ga0059261_3291	0.84	+0.6
3,420,557	-		Ga0059261_3291	0.84	-0.4
3,420,557	-				+0.8
3,420,557	-		Ga0059261_3291	0.84	-0.2
3,420,559	+		Ga0059261_3291	0.84	-1.5
3,420,559	+		Ga0059261_3291	0.84	-0.4
3,420,559	+		Ga0059261_3291	0.84	+0.1
3,420,560	-		Ga0059261_3291	0.84	-0.4
3,420,560	-		Ga0059261_3291	0.84	+0.6
3,420,619	+				-0.3
3,420,696	+				-0.1
3,420,880	+		Ga0059261_3292	0.58	+0.1
3,420,880	+		Ga0059261_3292	0.58	-0.4
3,420,881	-		Ga0059261_3292	0.58	+1.4
3,420,881	-		Ga0059261_3292	0.58	+0.2
3,420,881	-		Ga0059261_3292	0.58	-0.1
3,420,881	-		Ga0059261_3292	0.58	+0.0
3,420,881	-		Ga0059261_3292	0.58	-0.0
3,420,881	-		Ga0059261_3292	0.58	-1.0
3,420,881	-		Ga0059261_3292	0.58	-0.1
3,420,963	+		Ga0059261_3292	0.83	+1.0
3,420,963	+		Ga0059261_3292	0.83	-0.0
3,420,963	+		Ga0059261_3292	0.83	-0.4
3,420,963	+		Ga0059261_3292	0.83	-0.3
3,420,964	-		Ga0059261_3292	0.84	+0.1
3,420,964	-		Ga0059261_3292	0.84	-0.7
3,420,964	-		Ga0059261_3292	0.84	-1.4
3,420,964	-		Ga0059261_3292	0.84	-0.5
3,420,964	-		Ga0059261_3292	0.84	-0.8
3,420,964	-		Ga0059261_3292	0.84	-0.1
3,420,964	-		Ga0059261_3292	0.84	+0.2
3,420,964	-		Ga0059261_3292	0.84	+0.6