Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2769

Experiment: Choline Lysine 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 10 mM
2,874,184	+		Ga0059261_2767	0.81	-0.9
2,874,435	+				+0.2
2,874,435	+				-0.3
2,874,435	+				-0.5
2,874,435	+				+1.0
2,874,435	+				-0.6
2,874,435	+				+0.3
2,874,435	+				+0.2
2,874,435	+				-0.1
2,874,435	+				+1.0
2,874,435	+				-0.7
2,874,435	+				-0.1
2,874,436	-				-0.2
2,874,436	-				-0.0
2,874,436	-				-0.1
2,874,436	-				-0.7
2,874,436	-				+0.5
2,874,436	-				-0.6
2,874,646	+		Ga0059261_2768	0.76	-0.0
2,874,647	-		Ga0059261_2768	0.76	-2.8
2,874,647	-		Ga0059261_2768	0.76	-0.5
2,874,647	-		Ga0059261_2768	0.76	-0.4
2,874,707	-				+0.4
2,874,707	-				+0.6
2,874,871	+		Ga0059261_2769	0.13	-0.6
2,874,871	+		Ga0059261_2769	0.13	+0.4
2,874,872	-		Ga0059261_2769	0.13	+0.1
2,874,872	-		Ga0059261_2769	0.13	-0.4
2,874,872	-		Ga0059261_2769	0.13	+0.1
2,874,907	+		Ga0059261_2769	0.15	+0.5
2,874,907	+		Ga0059261_2769	0.15	+0.5
2,874,908	-		Ga0059261_2769	0.15	-0.7
2,874,908	-		Ga0059261_2769	0.15	+0.8
2,874,977	+		Ga0059261_2769	0.21	+0.3
2,875,106	+		Ga0059261_2769	0.31	+1.0
2,875,106	+				+2.1
2,875,137	+		Ga0059261_2769	0.33	-0.5
2,875,137	+		Ga0059261_2769	0.33	+0.4
2,875,137	+		Ga0059261_2769	0.33	-0.6
2,875,137	+		Ga0059261_2769	0.33	+1.3
2,875,137	+		Ga0059261_2769	0.33	-1.6
2,875,137	+		Ga0059261_2769	0.33	+2.2
2,875,138	-		Ga0059261_2769	0.33	+1.1
2,875,148	+		Ga0059261_2769	0.34	+0.6
2,875,148	+		Ga0059261_2769	0.34	-0.2
2,875,148	+		Ga0059261_2769	0.34	+0.3
2,875,149	-		Ga0059261_2769	0.34	+0.6
2,875,149	-		Ga0059261_2769	0.34	+0.1
2,875,149	-		Ga0059261_2769	0.34	+0.4
2,875,149	-		Ga0059261_2769	0.34	+0.6
2,875,149	-		Ga0059261_2769	0.34	-0.8
2,875,149	-		Ga0059261_2769	0.34	+0.5
2,875,149	-		Ga0059261_2769	0.34	+0.1
2,875,150	+		Ga0059261_2769	0.34	-0.9
2,875,151	-		Ga0059261_2769	0.34	-0.2
2,875,151	-		Ga0059261_2769	0.34	-0.0
2,875,151	-		Ga0059261_2769	0.34	-0.1
2,875,151	-		Ga0059261_2769	0.34	+0.9
2,875,163	+		Ga0059261_2769	0.35	-0.5
2,875,163	+		Ga0059261_2769	0.35	-0.7
2,875,333	+		Ga0059261_2769	0.48	+0.3
2,875,334	-		Ga0059261_2769	0.48	+0.0
2,875,439	+		Ga0059261_2769	0.56	-1.5
2,875,440	-		Ga0059261_2769	0.56	+0.4
2,875,483	+		Ga0059261_2769	0.59	-0.0
2,875,598	+		Ga0059261_2769	0.68	+0.5
2,875,598	+		Ga0059261_2769	0.68	+0.2
2,875,598	+		Ga0059261_2769	0.68	+0.2
2,875,598	+		Ga0059261_2769	0.68	+0.2
2,875,599	-		Ga0059261_2769	0.68	-0.3
2,875,599	-		Ga0059261_2769	0.68	+0.2
2,875,599	-		Ga0059261_2769	0.68	-1.3
2,875,599	-		Ga0059261_2769	0.68	-0.5
2,875,599	-		Ga0059261_2769	0.68	+0.3
2,875,599	-		Ga0059261_2769	0.68	-0.3
2,875,599	-		Ga0059261_2769	0.68	+0.1
2,875,599	-		Ga0059261_2769	0.68	+1.4
2,875,906	+				+0.2
2,875,906	+				-0.6
2,875,906	+				-0.2
2,875,906	+				-0.5
2,875,906	+				+1.0
2,875,906	+				+0.1
2,875,907	-				+0.1
2,875,907	-				+0.9
2,875,907	-				+0.4
2,876,136	+				+0.4
2,876,136	+				-0.2
2,876,136	+				-0.6
2,876,137	-				+0.2
2,876,137	-				-0.2
2,876,137	-				+0.9
2,876,137	-				-0.5
2,876,137	-				-0.5
2,876,171	+		Ga0059261_2770	0.15	-0.1
2,876,173	+		Ga0059261_2770	0.15	-0.5
2,876,173	+		Ga0059261_2770	0.15	-0.3
2,876,173	+		Ga0059261_2770	0.15	-0.1
2,876,173	+		Ga0059261_2770	0.15	+0.5
2,876,174	-		Ga0059261_2770	0.15	-0.6
2,876,174	-		Ga0059261_2770	0.15	-0.4
2,876,174	-		Ga0059261_2770	0.15	-0.8
2,876,174	-		Ga0059261_2770	0.15	-0.6
2,876,174	-		Ga0059261_2770	0.15	-0.1
2,876,174	-		Ga0059261_2770	0.15	-2.1
2,876,174	-		Ga0059261_2770	0.15	-1.5
2,876,206	+		Ga0059261_2770	0.21	+0.1
2,876,206	+		Ga0059261_2770	0.21	+0.7
2,876,206	+		Ga0059261_2770	0.21	+0.0
2,876,206	+				+0.3
2,876,206	+		Ga0059261_2770	0.21	+0.0
2,876,207	-		Ga0059261_2770	0.21	+0.0
2,876,207	-		Ga0059261_2770	0.21	+0.4
2,876,207	-		Ga0059261_2770	0.21	-0.4
2,876,207	-		Ga0059261_2770	0.21	-0.2
2,876,207	-		Ga0059261_2770	0.21	+1.4
2,876,207	-		Ga0059261_2770	0.21	-0.5
2,876,207	-		Ga0059261_2770	0.21	+0.2
2,876,207	-		Ga0059261_2770	0.21	-1.7
2,876,278	+		Ga0059261_2770	0.32	-0.7
2,876,278	+		Ga0059261_2770	0.32	-0.7
2,876,278	+		Ga0059261_2770	0.32	+0.3
2,876,279	-		Ga0059261_2770	0.33	+0.8
2,876,364	+		Ga0059261_2770	0.46	-0.3
2,876,365	-		Ga0059261_2770	0.47	+0.6
2,876,423	+		Ga0059261_2770	0.56	-0.7
2,876,423	+		Ga0059261_2770	0.56	-2.4
2,876,423	+		Ga0059261_2770	0.56	-0.1
2,876,423	+		Ga0059261_2770	0.56	+0.2
2,876,423	+		Ga0059261_2770	0.56	-0.4
2,876,423	+		Ga0059261_2770	0.56	+0.7
2,876,423	+		Ga0059261_2770	0.56	+0.2
2,876,423	+		Ga0059261_2770	0.56	-0.7
2,876,423	+		Ga0059261_2770	0.56	-0.4
2,876,424	-		Ga0059261_2770	0.56	-0.2
2,876,424	-				-0.1
2,876,424	-		Ga0059261_2770	0.56	+0.4
2,876,424	-		Ga0059261_2770	0.56	-0.9
2,876,424	-		Ga0059261_2770	0.56	-0.7
2,876,426	-		Ga0059261_2770	0.56	-0.1
2,876,426	-		Ga0059261_2770	0.56	-0.7
2,876,724	+				+0.1
2,876,724	+				-0.2
2,876,724	+				-0.8
2,876,724	+				+0.3
2,876,725	-				+0.6
2,876,725	-				-0.8
2,876,726	+				-0.7
2,876,726	+				-0.3
2,876,726	+				+0.9
2,876,726	+				-0.7
2,876,726	+				+0.1
2,876,726	+				-0.1
2,876,726	+				-1.1
2,876,727	-				-0.3
2,876,727	-				-1.6
2,876,727	-				-0.2
2,876,727	-				+0.2
2,876,727	-				-0.5
2,876,918	+		Ga0059261_2771	0.28	-0.3
2,876,918	+		Ga0059261_2771	0.28	-0.5
2,876,918	+		Ga0059261_2771	0.28	+0.4
2,876,918	+		Ga0059261_2771	0.28	-1.2
2,876,919	-		Ga0059261_2771	0.28	-0.3
2,876,919	-		Ga0059261_2771	0.28	-0.3
2,877,014	+		Ga0059261_2771	0.41	-0.3
2,877,014	+		Ga0059261_2771	0.41	+0.9
2,877,014	+		Ga0059261_2771	0.41	-0.4
2,877,014	+		Ga0059261_2771	0.41	+0.9
2,877,014	+		Ga0059261_2771	0.41	+1.5
2,877,014	+		Ga0059261_2771	0.41	-0.3
2,877,014	+		Ga0059261_2771	0.41	-0.6
2,877,015	-		Ga0059261_2771	0.41	-0.2
2,877,015	-		Ga0059261_2771	0.41	+0.6
2,877,015	-		Ga0059261_2771	0.41	-0.1
2,877,015	-		Ga0059261_2771	0.41	-0.7