Strain Fitness in Rahnella sp. WP5 around EX31_RS21450

Experiment: casaminos (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos (C)
31,964	+				-0.2
31,964	+				-0.6
31,964	+				+0.0
31,964	+				+1.3
31,964	+				-1.5
31,964	+				-0.5
31,964	+				+0.9
31,965	-				+2.3
31,965	-				+0.3
31,965	-				+0.1
31,965	-				-2.2
31,965	-				-0.4
31,965	-				+0.5
31,965	-				-0.3
31,965	-				+2.7
31,981	+				-0.3
31,981	+				-2.3
31,981	+				-1.9
31,981	+				-0.5
32,005	+				+2.1
32,023	+				+0.6
32,029	+				-1.5
32,029	+				+0.3
32,029	+				-0.4
32,030	-				+1.9
32,041	+				+0.6
32,049	+				+0.4
32,049	+				-1.5
32,049	+				+2.1
32,049	+				-0.2
32,049	+				-2.2
32,049	+				+0.1
32,050	-				+1.3
32,050	-				-1.9
32,050	-				+1.1
32,050	-				+3.6
32,054	+				+1.3
32,078	+				-2.1
32,078	+				-2.6
32,078	+				-0.1
32,078	+				+0.7
32,078	+				-2.4
32,079	-				+0.0
32,079	-				-0.9
32,079	-				+0.9
32,079	-				+2.0
32,079	-				+0.5
32,079	-				+1.3
32,082	+				+0.5
32,082	+				+1.6
32,082	+				+0.7
32,082	+				+0.5
32,082	+				-1.1
32,083	-				-2.5
32,083	-				-0.4
32,083	-				-0.2
32,104	-				+0.8
32,138	+				-0.1
32,335	+		EX31_RS21445	0.29	-0.1
32,335	+		EX31_RS21445	0.29	+0.3
32,336	-		EX31_RS21445	0.29	+2.3
32,336	-		EX31_RS21445	0.29	-1.5
32,398	-		EX31_RS21445	0.38	+1.1
32,410	+		EX31_RS21445	0.39	+1.0
32,410	+		EX31_RS21445	0.39	+1.7
32,410	+		EX31_RS21445	0.39	+0.9
32,411	-		EX31_RS21445	0.39	+2.5
32,412	+		EX31_RS21445	0.40	-1.4
32,412	+		EX31_RS21445	0.40	-1.5
32,412	+		EX31_RS21445	0.40	-2.2
32,412	+		EX31_RS21445	0.40	+0.3
32,412	+		EX31_RS21445	0.40	-1.7
32,412	+		EX31_RS21445	0.40	+0.3
32,412	+		EX31_RS21445	0.40	+0.7
32,412	+		EX31_RS21445	0.40	-1.7
32,412	+		EX31_RS21445	0.40	-0.3
32,412	+		EX31_RS21445	0.40	+1.0
32,412	+		EX31_RS21445	0.40	+0.3
32,413	-		EX31_RS21445	0.40	-0.7
32,413	-		EX31_RS21445	0.40	-0.1
32,413	-		EX31_RS21445	0.40	-1.1
32,413	-		EX31_RS21445	0.40	-0.3
32,416	+		EX31_RS21445	0.40	+0.5
32,416	+		EX31_RS21445	0.40	-0.3
32,416	+		EX31_RS21445	0.40	-0.7
32,416	+		EX31_RS21445	0.40	+0.5
32,416	+		EX31_RS21445	0.40	+0.9
32,417	-		EX31_RS21445	0.40	+0.3
32,697	+		EX31_RS21445	0.78	-0.3
32,697	+		EX31_RS21445	0.78	+1.5
32,697	+		EX31_RS21445	0.78	-0.3
32,697	+		EX31_RS21445	0.78	-0.1
32,698	-		EX31_RS21445	0.78	-0.3
32,698	-		EX31_RS21445	0.78	+0.9
32,701	+		EX31_RS21445	0.78	-1.1
32,724	+		EX31_RS21445	0.81	+0.0
32,724	+		EX31_RS21445	0.81	-0.1
32,724	+		EX31_RS21445	0.81	-2.1
32,724	+		EX31_RS21445	0.81	+0.1
32,724	+		EX31_RS21445	0.81	-1.3
32,725	-		EX31_RS21445	0.82	-0.3
32,725	-		EX31_RS21445	0.82	+0.6
32,725	-		EX31_RS21445	0.82	+1.5
32,725	-		EX31_RS21445	0.82	+0.3
32,728	+		EX31_RS21445	0.82	-0.4
32,728	+		EX31_RS21445	0.82	-0.8
32,728	+		EX31_RS21445	0.82	+0.0
32,728	+		EX31_RS21445	0.82	+0.0
32,728	+		EX31_RS21445	0.82	-0.2
32,728	+		EX31_RS21445	0.82	+0.7
32,729	-		EX31_RS21445	0.82	+1.5
32,729	-		EX31_RS21445	0.82	+1.3
32,729	-		EX31_RS21445	0.82	-3.3
32,729	-		EX31_RS21445	0.82	-1.3
32,729	-		EX31_RS21445	0.82	-2.4
32,729	-		EX31_RS21445	0.82	-1.4
32,729	-		EX31_RS21445	0.82	+1.1
32,729	-		EX31_RS21445	0.82	+1.1
32,730	+		EX31_RS21445	0.82	+0.7
32,730	+		EX31_RS21445	0.82	-0.2
32,731	-		EX31_RS21445	0.82	-0.5
32,731	-		EX31_RS21445	0.82	+0.9
32,773	+		EX31_RS21445	0.88	-1.7
32,774	-		EX31_RS21445	0.88	-2.7
32,787	+		EX31_RS21445	0.90	+1.0
32,787	+		EX31_RS21445	0.90	+3.3
32,787	+		EX31_RS21445	0.90	+0.0
32,788	-				+0.3
32,788	-				+1.3
32,817	-				+1.7
32,817	-				-0.3
32,860	+				-1.1
32,861	-				+0.0
32,921	+				+0.5
32,921	+				+0.5
32,921	+				+0.4
32,921	+				-0.1
32,921	+				+1.5
32,921	+				+0.9
32,921	+				+1.0
32,921	+				-1.5
32,921	+				-0.1
32,921	+				+0.4
32,922	-				-0.3
32,922	-				-1.7
32,922	-				-1.1
32,922	-				-0.7
32,922	-				-0.4
32,922	-				-1.7
32,922	-				+0.7
32,922	-				+0.8
32,922	-				+1.5
32,922	-				+0.1
32,922	-				-0.6
32,922	-				+1.0
32,922	-				+0.3
33,020	+		EX31_RS21450	0.12	+0.5
33,021	-		EX31_RS21450	0.12	+1.3
33,046	+		EX31_RS21450	0.15	+0.3
33,046	+		EX31_RS21450	0.15	-1.5
33,047	-		EX31_RS21450	0.15	+0.9
33,112	-		EX31_RS21450	0.23	+0.6
33,145	+		EX31_RS21450	0.27	+1.3
33,146	-		EX31_RS21450	0.27	-2.2
33,146	-		EX31_RS21450	0.27	-0.2
33,320	+		EX31_RS21450	0.47	-1.9
33,320	+		EX31_RS21450	0.47	-0.6
33,321	-		EX31_RS21450	0.48	+0.8
33,421	-		EX31_RS21450	0.59	+0.4
33,534	+		EX31_RS21450	0.73	+0.3
33,534	+		EX31_RS21450	0.73	+1.7
33,534	+		EX31_RS21450	0.73	+1.0
33,534	+		EX31_RS21450	0.73	+0.7
33,534	+		EX31_RS21450	0.73	+0.3
33,535	-		EX31_RS21450	0.73	+2.6
33,535	-		EX31_RS21450	0.73	+0.1
33,535	-		EX31_RS21450	0.73	-0.7
33,535	-		EX31_RS21450	0.73	-0.5
33,535	-		EX31_RS21450	0.73	-0.8
33,535	-		EX31_RS21450	0.73	+1.3
33,547	-		EX31_RS21450	0.74	+0.7
33,547	-		EX31_RS21450	0.74	+0.4
33,609	+		EX31_RS21450	0.82	+0.7
33,609	+		EX31_RS21450	0.82	+0.1
33,609	+		EX31_RS21450	0.82	+1.7
33,610	-		EX31_RS21450	0.82	+0.6
33,610	-		EX31_RS21450	0.82	-1.7
33,610	-		EX31_RS21450	0.82	+2.7
33,610	-		EX31_RS21450	0.82	+0.7
33,610	-		EX31_RS21450	0.82	-0.7
33,626	+		EX31_RS21450	0.84	-2.4
33,626	+		EX31_RS21450	0.84	-1.4
33,626	+		EX31_RS21450	0.84	-1.5
33,627	-		EX31_RS21450	0.84	-0.3
33,627	-		EX31_RS21450	0.84	+1.3
33,638	-		EX31_RS21450	0.85	+1.1
33,638	-		EX31_RS21450	0.85	+0.1
33,665	-		EX31_RS21450	0.88	-0.1
33,665	-		EX31_RS21450	0.88	-0.7
33,665	-		EX31_RS21450	0.88	-0.3
33,697	+				-1.3
33,697	+				+0.0
33,698	-				+0.8
33,698	-				-0.5
33,698	-				+0.3
33,745	-				-0.9
33,745	-				-0.1
33,805	-				+2.1
33,813	-				-0.1
33,816	-				+0.6
33,816	-				-0.6
33,816	-				-1.3
33,816	-				+0.4
33,816	-				-0.3
33,829	+				-0.5
33,858	-				+1.3
33,882	+				+0.0
33,920	-				-0.2
33,967	-		EX31_RS21455	0.11	+0.5
33,967	-		EX31_RS21455	0.11	-0.7
33,994	+		EX31_RS21455	0.14	-0.9
33,994	+		EX31_RS21455	0.14	-1.8
33,994	+		EX31_RS21455	0.14	-0.7
33,995	-		EX31_RS21455	0.14	+0.0
33,995	-		EX31_RS21455	0.14	-0.3
33,997	+		EX31_RS21455	0.14	-0.7
33,997	+		EX31_RS21455	0.14	+1.3
33,998	-		EX31_RS21455	0.14	+0.8
33,998	-		EX31_RS21455	0.14	+0.7
33,998	-		EX31_RS21455	0.14	+0.7
34,096	+		EX31_RS21455	0.25	+1.1
34,096	+		EX31_RS21455	0.25	-0.7
34,137	+		EX31_RS21455	0.29	+0.2
34,137	+		EX31_RS21455	0.29	+0.6
34,137	+		EX31_RS21455	0.29	+1.4
34,137	+		EX31_RS21455	0.29	+0.0
34,137	+		EX31_RS21455	0.29	-1.2
34,138	-		EX31_RS21455	0.30	+1.4
34,138	-		EX31_RS21455	0.30	+0.9
34,170	+		EX31_RS21455	0.33	-0.7
34,170	+		EX31_RS21455	0.33	-1.5
34,170	+		EX31_RS21455	0.33	-1.7
34,170	+		EX31_RS21455	0.33	-1.0
34,171	-		EX31_RS21455	0.33	+0.5
34,174	+		EX31_RS21455	0.34	+0.1
34,174	+		EX31_RS21455	0.34	-1.4
34,175	-		EX31_RS21455	0.34	+0.5
34,175	-		EX31_RS21455	0.34	-0.9
34,175	-		EX31_RS21455	0.34	+0.0
34,216	+		EX31_RS21455	0.38	+1.3
34,217	-		EX31_RS21455	0.38	-0.7
34,404	-		EX31_RS21455	0.59	+1.0
34,404	-		EX31_RS21455	0.59	-1.9
34,558	+		EX31_RS21455	0.76	+0.1
34,558	+		EX31_RS21455	0.76	+0.7
34,562	-		EX31_RS21455	0.76	+1.3
34,562	-		EX31_RS21455	0.76	-1.2
34,562	-		EX31_RS21455	0.76	+0.6
34,607	+		EX31_RS21455	0.81	+0.8
34,607	+		EX31_RS21455	0.81	+0.3
34,607	+		EX31_RS21455	0.81	-0.3
34,608	-		EX31_RS21455	0.81	-0.4
34,608	-		EX31_RS21455	0.81	+0.0
34,608	-		EX31_RS21455	0.81	-0.3
34,622	+		EX31_RS21455	0.83	+0.3
34,623	-		EX31_RS21455	0.83	-1.1
34,623	-		EX31_RS21455	0.83	-0.6