Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS02165 and CA265_RS02170 are separated by 265 nucleotides CA265_RS02170 and CA265_RS02175 are separated by 100 nucleotides
CA265_RS02165: CA265_RS02165 - hypothetical protein, at 548,149 to 549,120
_RS02165
CA265_RS02170: CA265_RS02170 - hypothetical protein, at 549,386 to 549,706
_RS02170
CA265_RS02175: CA265_RS02175 - hypothetical protein, at 549,807 to 550,415
_RS02175
Position (kb) 549
550 Strain fitness (log2 ratio) -2
-1
0
1 at 548.441 kb on + strand, within CA265_RS02165 at 548.513 kb on + strand, within CA265_RS02165 at 548.617 kb on - strand, within CA265_RS02165 at 548.627 kb on + strand, within CA265_RS02165 at 548.628 kb on - strand, within CA265_RS02165 at 548.679 kb on + strand, within CA265_RS02165 at 548.679 kb on + strand, within CA265_RS02165 at 548.687 kb on - strand, within CA265_RS02165 at 548.687 kb on - strand, within CA265_RS02165 at 548.721 kb on + strand, within CA265_RS02165 at 548.743 kb on + strand, within CA265_RS02165 at 548.743 kb on + strand, within CA265_RS02165 at 548.785 kb on - strand, within CA265_RS02165 at 548.927 kb on + strand, within CA265_RS02165 at 548.927 kb on + strand, within CA265_RS02165 at 548.928 kb on - strand, within CA265_RS02165 at 549.011 kb on - strand, within CA265_RS02165 at 549.036 kb on + strand at 549.062 kb on + strand at 549.073 kb on + strand at 549.076 kb on + strand at 549.150 kb on + strand at 549.155 kb on - strand at 549.302 kb on + strand at 549.303 kb on - strand at 549.370 kb on + strand at 549.371 kb on - strand at 549.374 kb on - strand at 549.447 kb on + strand, within CA265_RS02170 at 549.548 kb on - strand, within CA265_RS02170 at 549.559 kb on - strand, within CA265_RS02170 at 549.777 kb on + strand at 549.806 kb on + strand at 549.936 kb on - strand, within CA265_RS02175 at 549.962 kb on + strand, within CA265_RS02175 at 550.020 kb on - strand, within CA265_RS02175 at 550.032 kb on - strand, within CA265_RS02175 at 550.092 kb on - strand, within CA265_RS02175 at 550.138 kb on + strand, within CA265_RS02175 at 550.139 kb on - strand, within CA265_RS02175 at 550.173 kb on + strand, within CA265_RS02175 at 550.173 kb on + strand, within CA265_RS02175 at 550.328 kb on - strand, within CA265_RS02175 at 550.340 kb on + strand, within CA265_RS02175 at 550.340 kb on + strand, within CA265_RS02175 at 550.341 kb on - strand, within CA265_RS02175 at 550.341 kb on - strand, within CA265_RS02175 at 550.341 kb on - strand, within CA265_RS02175 at 550.351 kb on - strand, within CA265_RS02175 at 550.455 kb on - strand at 550.457 kb on - strand at 550.459 kb on + strand at 550.460 kb on - strand at 550.465 kb on - strand at 550.507 kb on + strand at 550.508 kb on - strand at 550.519 kb on + strand at 550.528 kb on + strand at 550.533 kb on - strand at 550.533 kb on - strand at 550.540 kb on + strand at 550.541 kb on - strand at 550.559 kb on + strand at 550.559 kb on + strand at 550.560 kb on - strand at 550.595 kb on + strand at 550.596 kb on - strand at 550.632 kb on - strand at 550.632 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 548,441 + CA265_RS02165 0.30 -0.6 548,513 + CA265_RS02165 0.37 -0.2 548,617 - CA265_RS02165 0.48 +0.1 548,627 + CA265_RS02165 0.49 -0.0 548,628 - CA265_RS02165 0.49 -0.1 548,679 + CA265_RS02165 0.55 -0.1 548,679 + CA265_RS02165 0.55 +0.1 548,687 - CA265_RS02165 0.55 -0.4 548,687 - CA265_RS02165 0.55 +0.2 548,721 + CA265_RS02165 0.59 +0.4 548,743 + CA265_RS02165 0.61 +0.3 548,743 + CA265_RS02165 0.61 -1.0 548,785 - CA265_RS02165 0.65 +0.2 548,927 + CA265_RS02165 0.80 -0.8 548,927 + CA265_RS02165 0.80 +0.1 548,928 - CA265_RS02165 0.80 -0.0 549,011 - CA265_RS02165 0.89 +0.1 549,036 + +0.3 549,062 + -0.3 549,073 + +0.9 549,076 + +0.3 549,150 + -1.0 549,155 - -0.3 549,302 + +0.3 549,303 - -0.1 549,370 + +0.5 549,371 - -0.3 549,374 - +0.1 549,447 + CA265_RS02170 0.19 -0.3 549,548 - CA265_RS02170 0.50 -0.5 549,559 - CA265_RS02170 0.54 -1.8 549,777 + -0.5 549,806 + +0.2 549,936 - CA265_RS02175 0.21 -0.5 549,962 + CA265_RS02175 0.25 -0.1 550,020 - CA265_RS02175 0.35 +0.6 550,032 - CA265_RS02175 0.37 -1.7 550,092 - CA265_RS02175 0.47 -0.5 550,138 + CA265_RS02175 0.54 -0.3 550,139 - CA265_RS02175 0.55 -1.7 550,173 + CA265_RS02175 0.60 -0.5 550,173 + CA265_RS02175 0.60 +0.2 550,328 - CA265_RS02175 0.86 -0.7 550,340 + CA265_RS02175 0.88 -1.9 550,340 + CA265_RS02175 0.88 -1.2 550,341 - CA265_RS02175 0.88 +0.1 550,341 - CA265_RS02175 0.88 +0.8 550,341 - CA265_RS02175 0.88 +0.1 550,351 - CA265_RS02175 0.89 +0.3 550,455 - +0.2 550,457 - -0.3 550,459 + +0.3 550,460 - +0.1 550,465 - +0.5 550,507 + +0.2 550,508 - -0.1 550,519 + -0.2 550,528 + +0.2 550,533 - -0.1 550,533 - +1.2 550,540 + -1.2 550,541 - +0.3 550,559 + -0.5 550,559 + -0.7 550,560 - -0.2 550,595 + -0.2 550,596 - +0.5 550,632 - +0.3 550,632 - +0.3
Or see this region's nucleotide sequence