Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17445

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
3,950,861	-				-0.8
3,950,862	+				-1.0
3,951,108	+		BPHYT_RS17440	0.42	-1.0
3,951,108	+		BPHYT_RS17440	0.42	-0.3
3,951,108	+		BPHYT_RS17440	0.42	+0.0
3,951,180	-		BPHYT_RS17440	0.62	+0.1
3,951,308	+				-0.3
3,951,309	-				+0.5
3,951,309	-				+0.0
3,951,364	+				-0.2
3,951,365	-				+0.2
3,951,386	+				-0.6
3,951,387	-				-0.1
3,951,614	-				+0.3
3,951,915	-		BPHYT_RS17445	0.25	+0.6
3,952,015	+		BPHYT_RS17445	0.35	-1.3
3,952,015	+		BPHYT_RS17445	0.35	-1.3
3,952,249	-		BPHYT_RS17445	0.56	-0.2
3,952,483	-		BPHYT_RS17445	0.77	-1.4
3,952,609	-		BPHYT_RS17445	0.89	-1.1
3,952,617	+		BPHYT_RS17445	0.90	-0.6
3,952,618	-		BPHYT_RS17445	0.90	-1.5
3,952,626	+				-1.4
3,952,626	+				-2.0
3,952,626	+				-1.0
3,952,627	-				-1.1
3,952,789	+				-0.4
3,952,790	-				-0.6
3,952,950	-		BPHYT_RS17450	0.13	+1.1
3,953,037	+		BPHYT_RS17450	0.21	-1.7
3,953,037	+		BPHYT_RS17450	0.21	-0.3
3,953,038	-		BPHYT_RS17450	0.22	+0.7
3,953,042	+		BPHYT_RS17450	0.22	+0.7
3,953,264	-		BPHYT_RS17450	0.45	+0.2
3,953,548	+		BPHYT_RS17450	0.74	+0.2
3,953,718	-				+1.1