Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16165
Experiment: A22 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | A22 0.005 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,666,393 | + | BPHYT_RS16160 | 0.41 | -0.5 | |
| 3,666,687 | + | BPHYT_RS16160 | 0.62 | +0.7 | |
| 3,666,709 | - | BPHYT_RS16160 | 0.64 | +0.5 | |
| 3,667,104 | - | -0.9 | |||
| 3,667,192 | - | +0.1 | |||
| 3,667,224 | - | +0.1 | |||
| 3,667,235 | - | -1.1 | |||
| 3,667,327 | + | -0.5 | |||
| 3,667,328 | - | -0.8 | |||
| 3,667,374 | + | -0.5 | |||
| 3,667,375 | - | -0.7 | |||
| 3,667,375 | - | -0.1 | |||
| 3,667,437 | - | -0.8 | |||
| 3,669,052 | - | -0.6 | |||
| 3,669,052 | - | -0.1 |
Or see this region's nucleotide sequence